SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g227000

Feature Type:gene_model
Chromosome:Gm02
Start:43229374
stop:43232532
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g227000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G58620.1AT JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
KOG1595 KOG CCCH-type Zn-finger protein JGI N/AIEA
PTHR14493PantherFam UNKEMPT FAMILY MEMBER JGI N/AIEA
PF00642Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) JGI N/AIEA
PF13637Pfam Ankyrin repeats (many copies) JGI N/AIEA

Gene model name correspondences to Glyma.02g227000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g39210 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g227000
>Glyma.02g227000.1 sequence-type=CDS polypeptide=Glyma.02g227000.1.p locus=Glyma.02g227000 id=Glyma.02g227000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTGCGGTGTTTCCAAGGGGAAACCTTCTCAAATTGATTTGATCATGGAGGAGAAGTATGCAAAAGAAGGGATGCATCATAAGATTTCTGCTTTGCTTGAGTTTTCAGCGACGGATGATCTAATTGGTTTCAAAGATGCTGTGGAAAAGGAGGGTCATGATGTTGATGGGGTGGGGTTTTGGTATGGAAGGCGTGTTGGCTCGAAGAAAATAGGTTATGAAGAGAGGACACCTCTCATGGTTGCTTCCATGTTTGGAAGCCTTGATGTATCAACTTATATTCTTGGAATGGGTTGTATCGATGTTAATCGGGCTAGTAGGTCAGATGGGGCTACTGCTCTTCATTGTGCTGTTGCTGGGGGTTCTGCCGCTTCCGTTGAGGTTGTCAAGCTTTTGCTTGATGCATCTGCTGATGTTAGTGCTGTTGACGCCAATGGTAACCGGTCAATTGACTTGATTGTCTCTGTGGCTAATTCTATCTTCAATCAAAGGTCAAGTGTGCTACAGGCCCTCCTGGAGGGTACAAGTGATGCTGATCAGGCATGTCTCTCACTTCCGGAAGTGATTGACCAACTTGAGGAACAAAGGCAAGATATGACCACACCCCGTGTTTCAAAAGACTATCCTATTGATCTCTCCCTTCCAGACATAAAGAATGGGATATATGGTACTGATGAGTTTAGGATGTATACATTCAAAGTGAAGCCTTGTTCGAGGGCGTATTCTCATGATTGGACAGAGTGCCCCTTTGTTCATCCAGGGGAAAATGCAAGGCGGCGTGATCCAAGGAAGTATCATTACAGCTGCGTCCCTTGTCCCGAGTTTAGGAAGGGATCTTGCAGCAAGGGCGATGCCTGTGAGTATGCACATGGCATTTTTGAGTGCTGGCTTCACCCTGCCCAGTACCGGACTCGGCTTTGCAAGGATGAGGGTGGATGCACAAGGAGGGTATGCTTCTTTGCTCACAAGCTTGAGGAGCTTCGCCCCTTGTATGCTTCTACTGGTTCTGCTATTCCTTCCCCGAGGTCCTATTCAGCTAGTGCTTCTGCATTGGAGATGGGTTCAGTTAACCCAATTGCACTTGGTTCTCCATCTGTCTTGATGCCACCTACCTCAACACCACCTTTGACTCCATCTGGAGCATCTTCTCCCATTGCTGGATCCATGTGGTCTCAATCTAATGTTTCGGTCCCTACCTTGCAGCTGCCCAAAAGCAGATTGAAGACTGCATCTACTGTAAGAGATACTGATTTAGATATGGAACTGCTTGGACTTGAAACACATTGGCGTAGACAACAGCTAATGATGGATGAGATATCTGCTCTTTCCTCTCCCAACTGGAAAAATTCCATGCCTAATAGTCCATCTTTTCGTGTTCCTTTGAATGATCACACTGGGGAGTTAAATAGGCTTTCAGGGGTGAAGCCTGCTAACCTTGAAGATATGTTTGGATCGCTCGATCCATCAATTTTGTCTAAATACCATGGAATCTCACTTGATGTTGCAGGACCTCAGTTACAGTCTCCAACCGGAATCCAGATGCGCCAGAATGTGAACCAGCAGCTAGGAGGCTATTCATCCAGCCTTTCCACTTTGAATGTGATTGGATCGCGGTCCTTCAGGCTTGATCAGTCTGGCGAAGCAGCCTCGGTGGCCTTGAATCCAAGAGTTGCTGCCTTTGCAAAGCGGAGCCAGAGCTTCATTGAGCGCGGCGTGGTGAACCATCATTCTGAACTTCCTTCTCCAAAGCCCTCTACCTTCTCTAACTGGGGCTCACCTGTTGGAAAATTAGATTGGGCCGTAAATGGAGAAGAGCTGAATAAGCTGAGGAAATCTGCTTCCTTTGGATTTCGAGGCAGCGACACTCCTCTAACAAAGACTTCAACCAAAATGTCAGCAAATGTTGATGATGAGCCAGATGTGTCTTGGGTTAACTCACTTGTGAAGGATGCTCCACCGGAATCCGGTGAATCTGGTGAATACAGTGTGGAAGATCAGCGAAAGCTACTGCAATGCCACAATGGAACAGATGCGATTCCAGCATGGTTGGAGCAATTGTACTTGGACCAGGAGCAAATGGTGGCATGA
Predicted protein sequences of Glyma.02g227000
>Glyma.02g227000.1.p sequence-type=predicted peptide transcript=Glyma.02g227000.1 locus=Glyma.02g227000 id=Glyma.02g227000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MCGVSKGKPSQIDLIMEEKYAKEGMHHKISALLEFSATDDLIGFKDAVEKEGHDVDGVGFWYGRRVGSKKIGYEERTPLMVASMFGSLDVSTYILGMGCIDVNRASRSDGATALHCAVAGGSAASVEVVKLLLDASADVSAVDANGNRSIDLIVSVANSIFNQRSSVLQALLEGTSDADQACLSLPEVIDQLEEQRQDMTTPRVSKDYPIDLSLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCSKGDACEYAHGIFECWLHPAQYRTRLCKDEGGCTRRVCFFAHKLEELRPLYASTGSAIPSPRSYSASASALEMGSVNPIALGSPSVLMPPTSTPPLTPSGASSPIAGSMWSQSNVSVPTLQLPKSRLKTASTVRDTDLDMELLGLETHWRRQQLMMDEISALSSPNWKNSMPNSPSFRVPLNDHTGELNRLSGVKPANLEDMFGSLDPSILSKYHGISLDVAGPQLQSPTGIQMRQNVNQQLGGYSSSLSTLNVIGSRSFRLDQSGEAASVALNPRVAAFAKRSQSFIERGVVNHHSELPSPKPSTFSNWGSPVGKLDWAVNGEELNKLRKSASFGFRGSDTPLTKTSTKMSANVDDEPDVSWVNSLVKDAPPESGESGEYSVEDQRKLLQCHNGTDAIPAWLEQLYLDQEQMVA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo