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Report for Sequence Feature Glyma.02g209900

Feature Type:gene_model
Chromosome:Gm02
Start:39513816
stop:39515113
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.02g209900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G46860.1AT pyrophosphorylase 3 JGI N/AIEA
GO:0006796GO-bp phosphate-containing compound metabolic process EnsemblGenomesN/AIEA
GO:0006796GO-bp phosphate-containing compound metabolic process JGI N/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm JGI N/AIEA
GO:0000287GO-mf magnesium ion binding EnsemblGenomesN/AIEA
GO:0000287GO-mf magnesium ion binding JGI N/AIEA
GO:0004427GO-mf inorganic diphosphatase activity EnsemblGenomesN/AIEA
GO:0004427GO-mf inorganic diphosphatase activity JGI N/AIEA
PTHR10286Panther INORGANIC PYROPHOSPHATASE JGI N/AIEA
PF00719PFAM Inorganic pyrophosphatase JGI N/AIEA
GN7V-52861SoyCyc9-rxn inorganic diphosphatase Plant Metabolic Network ISS

Expression Patterns of Glyma.02g209900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.02g209900 not represented in the dataset
Glyma.02g209900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.02g209900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g37251 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g209900
>Glyma.02g209900.1 sequence-type=CDS polypeptide=Glyma.02g209900.1.p locus=Glyma.02g209900 ID=Glyma.02g209900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTCTTGATTCAAGAGGCTCTTTTGTGGAGAGGCAAGCAGTGGTCTCTAGAAATAATTATGAGTGACAATGGTGAAGAAGCTGGAGAAAATCGTCTAGTTCCCCGTTTGAATGAAAGGATTCTTTCATCATTGTCAAGGAGATCAGTAGCTGCCCATCCTTGGCATGATCTAGAAATTGGACCTGAGGCTCCTCAGATTTTCAATTGTGTTGTGGAGATCACTAAAGGAAGCAAGGTTAAGTATGAACTTGACAAAAAGACTGGATTGATTAAGGTTGATCGGGTTTTGTATTCATCAGTTGTTTATCCACATAACTATGGTTTTATCCCTCGCACACTGTGTGAAGACAATGATCCAATTGACAAAATTCATTCTAAGACAAAAAGAATGAGCACAAGGAGGTAG
Predicted protein sequences of Glyma.02g209900
>Glyma.02g209900.1.p sequence-type=predicted peptide transcript=Glyma.02g209900.1 locus=Glyma.02g209900 ID=Glyma.02g209900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFLIQEALLWRGKQWSLEIIMSDNGEEAGENRLVPRLNERILSSLSRRSVAAHPWHDLEIGPEAPQIFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPIDKIHSKTKRMSTRR*






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