Glyma.02g209100

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Report for Sequence Feature Glyma.02g209100

Feature Type:	gene_model
Chromosome:	Gm02
Start:	39427960
stop:	39433742
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.02g209100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G22460.1	AT	O-fucosyltransferase family protein	JGI	N/A	IEA
GO:0005975	GO-bp	carbohydrate metabolic process	EnsemblGenomes	N/A	IEA
GO:0006004	GO-bp	fucose metabolic process	EnsemblGenomes	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0016740	GO-mf	transferase activity	EnsemblGenomes	N/A	IEA
GO:0016757	GO-mf	transferase activity, transferring glycosyl groups	EnsemblGenomes	N/A	IEA
PF10250	PFAM	GDP-fucose protein O-fucosyltransferase	JGI	N/A	IEA

Expression Patterns of Glyma.02g209100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.02g209100 not represented in the dataset	Glyma.02g209100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.02g209100

Paralog	Evidence	Comments
Glyma.14g177300	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.02g209100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma02g37171	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.02g209100

Limit To All Plant Sequences

>Glyma.02g209100.2 sequence-type=transcript locus=Glyma.02g209100 ID=Glyma.02g209100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAACACTGAGAAAAGCCAAAAACCATACCAAATACAGCATTTAAATCCGCTTTTGCTGTCTTTTCATGCCCTTCGATTTCAACTCACCAAACCAAAACACACTCATCACTGTCTCTCACAACCCCAACAAGTGTTCATCCCCAGAGATTAACACTAGTGCTGCGAACAAACCAACAAATttcatTGACCCAAACAAAAGTGAGAGAGTGGAATGCAGAAACGCAAGTGGATTCCGTTGGCGGTGCTGAGAAAGTTGCTAATTGCGGCCATATGCTCCATAGCGTTTGTGGCTCTCTTCTCTGTTCGCGTACACATTATTCCTTCTTCTAAAGATCACAGGTTCAACGACAAGATCTCAACGACTCAGGATCCACAAAGCTGGACGCGGGAGCTCGCACCACCCCATTTATCCAAAGCTCCACTTCCTACTCCCAAGTTGAGTGGTTCAAGAGGGAATTTTGATTACCAGAAGCTGTGGAAGACTCCATCAAATCATGGGTTTCTGCCCTGTACAAACCCTACACCTAATTACACCACTCCTGCCGAATCGCGAGGATATCTTTTAGTTCATACAAATGGCGGGCTCAACCAAATGCGTTCTGGGATATGTGATATGGTAGCAGTAGCTCGAATCATAAATGCCACTCTTGTAATTCCAGAACTTGATAAAAGGTCATTTTGGCAAGATACTAGCAATTTCTCTGATATTTTTGACGAAGAGCATTTTATGAATTCTCTAGCTAATGATGTAAAAATCATTAAGAAACTTCCCAAAGAATTGGTTAATGCAACCAGAGTGGTCAAGCAATTCATAAGCTGGTCTGGCATGGATTACTATGAGAATGAGATTGCTAGCTTGTGGGAAGATTACCAAGTTATTCGAGCTTCCAAATCTGATTCACGATTAGCAAACAACAATCTACCTCCAGACATTCAGAAGCTTCGCTGCCGGGCTTGTTATGAAGCACTTCACTTCTCTCCTCTCATTGAACAAATGGGAAAATTGTTGGTGGAGAGGATGAGGTCATTTGGTCTCTATATTGCATTGCATTTGCGTTATGAGAAGGATATGCTCGCATTTAGTGGGTGCACCCATGATTTATCTCTAGTTGAAGCTGAAGAGCTACGGTTGATCAGAGAGAACATTTCCTATTGGAAAATAAAGGACATTGATCCAATAGAACAGAGGTCCAAAGGGCTTTGCTCCTTAACTCCAAAGGAAGTTGGGATTTTTCTTACCGCTCTCGGATACCCATCAACAACTCCAATATATATTGCTGCTGGAGAGATATATGGGGGCGAGTCCCACATGGCTGAACTGCATTCCCGATATCCATTGTTGATGAGCAAGGAAAAGTTGGCATCCATAGAAGAGCTTGAACCTTTTTCTAATCATGCATCCCAAATGGCTGCTCTTGACTATATTGTATCTATTGAAAGTGATGTATTTATACCTTCTTATTCCGGAAATATGGCAAAGGCTGTTGAGGGTCATCGCCGTTTTCTTCGACGTGGAAGAACAGTATCTCCAGACAAGAAAGCCCTTGTTCATCTGTTCGATAAACTGGATCAGGGAATAATAACTGAGGGGAAGAAACTATCAAATAGGATTATTGATCTCCACAGAAGACGACTTGGTTCTCCCAGGAAGAGAAAAGGGCCAATTTCTGGAACAAAGCACATGGACAGGTTTCGGTCAGAAGAAGCCTTTTATGCTAATCCCTTGCCTGATTGTTTATGCCAGACAGAGACATAACCACCACCTCTAAACGTCTCTCAGATTGTTTGATAGATAAGATACTGCTGAACTTTTTCCTTGGAAATACCCCTTGGAGAAAAGATGGCACATGTGTAATCAATTTACACAAAGTTTGAGCATAAGATCTGATATGCAGCTGGGAGGTGGCACTGTGGTGGCAGAGTGTATATACCGGTATCGCTGTTACACGTACCCTTCAATTTGGGGGAAAAAATAAAGGAAAAGAAAACCCTTATTCGGGTTTTGACATAAAAAATTAGAGATTGGGATGAGTAGTTCATGGGTCTAGTAGAGGGCAGGATGGAGATTTGAGATGACTGGATTCATTTGTTATGTGGACATGCCTTAGTTATTTATGAAGAGGTATAGTGTAGAGCTTCCAGATATGGCCAGGGATCTCAATCACCCGTTATTGAATTTCTTCTAGAGCAATTTTACATAGTTCCACATTTTGTAATCTGTTCTTGTTGAAAGACAACAAAATGCAAAAATCTTTTATTGTTCCCTAATGCGTACGTTTATTTATTAGGGAGAGGGGGGAAAGTGTGGCAGAACTTCATCTGTCGTTTGGAAACATACAGATATTTGCAAATAGAAAATTAGAAAATTCGGCTTAATTTTGTTGAAGTCAGACTTCCTAGGAGTCATGAGTCATGCAGCCTGAAGGGAAAACTAGAATAGGAAATGGTTTCAGTCTTTAAGAATCAGTTTTTTTTTTTTAATTTAAAATTCAGTATCAACTCTAAAAAGGCATTTTTAGCAAT

Coding sequences of Glyma.02g209100

Limit To All Plant Sequences

>Glyma.02g209100.1 sequence-type=CDS polypeptide=Glyma.02g209100.1.p locus=Glyma.02g209100 ID=Glyma.02g209100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGAAACGCAAGTGGATTCCGTTGGCGGTGCTGAGAAAGTTGCTAATTGCGGCCATATGCTCCATAGCGTTTGTGGCTCTCTTCTCTGTTCGCGTACACATTATTCCTTCTTCTAAAGATCACAGGTTCAACGACAAGATCTCAACGACTCAGGATCCACAAAGCTGGACGCGGGAGCTCGCACCACCCCATTTATCCAAAGCTCCACTTCCTACTCCCAAGTTGAGTGGTTCAAGAGGGAATTTTGATTACCAGAAGCTGTGGAAGACTCCATCAAATCATGGGTTTCTGCCCTGTACAAACCCTACACCTAATTACACCACTCCTGCCGAATCGCGAGGATATCTTTTAGTTCATACAAATGGCGGGCTCAACCAAATGCGTTCTGGGATATGTGATATGGTAGCAGTAGCTCGAATCATAAATGCCACTCTTGTAATTCCAGAACTTGATAAAAGGTCATTTTGGCAAGATACTAGCAATTTCTCTGATATTTTTGACGAAGAGCATTTTATGAATTCTCTAGCTAATGATGTAAAAATCATTAAGAAACTTCCCAAAGAATTGGTTAATGCAACCAGAGTGGTCAAGCAATTCATAAGCTGGTCTGGCATGGATTACTATGAGAATGAGATTGCTAGCTTGTGGGAAGATTACCAAGTTATTCGAGCTTCCAAATCTGATTCACGATTAGCAAACAACAATCTACCTCCAGACATTCAGAAGCTTCGCTGCCGGGCTTGTTATGAAGCACTTCACTTCTCTCCTCTCATTGAACAAATGGGAAAATTGTTGGTGGAGAGGATGAGGTCATTTGGTCTCTATATTGCATTGCATTTGCGTTATGAGAAGGATATGCTCGCATTTAGTGGGTGCACCCATGATTTATCTCTAGTTGAAGCTGAAGAGCTACGGTTGATCAGAGAGAACATTTCCTATTGGAAAATAAAGGACATTGATCCAATAGAACAGAGGTCCAAAGGGCTTTGCTCCTTAACTCCAAAGGAAGTTGGGATTTTTCTTACCGCTCTCGGATACCCATCAACAACTCCAATATATATTGCTGCTGGAGAGATATATGGGGGCGAGTCCCACATGGCTGAACTGCATTCCCGATATCCATTGTTGATGAGCAAGGAAAAGTTGGCATCCATAGAAGAGCTTGAACCTTTTTCTAATCATGCATCCCAAATGGCTGCTCTTGACTATATTGTATCTATTGAAAGTGATGTATTTATACCTTCTTATTCCGGAAATATGGCAAAGGCTGTTGAGGGTCATCGCCGTTTTCTTCGACGTGGAAGAACAGTATCTCCAGACAAGAAAGCCCTTGTTCATCTGTTCGATAAACTGGATCAGGGAATAATAACTGAGGGGAAGAAACTATCAAATAGGATTATTGATCTCCACAGAAGACGACTTGGTTCTCCCAGGAAGAGAAAAGGGCCAATTTCTGGAACAAAGCACATGGACAGGTTTCGGTCAGAAGAAGCCTTTTATGCTAATCCCTTGCCTGATTGTTTATGCCAGACAGAGACATAA

>Glyma.02g209100.2 sequence-type=CDS polypeptide=Glyma.02g209100.2.p locus=Glyma.02g209100 ID=Glyma.02g209100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGAAACGCAAGTGGATTCCGTTGGCGGTGCTGAGAAAGTTGCTAATTGCGGCCATATGCTCCATAGCGTTTGTGGCTCTCTTCTCTGTTCGCGTACACATTATTCCTTCTTCTAAAGATCACAGGTTCAACGACAAGATCTCAACGACTCAGGATCCACAAAGCTGGACGCGGGAGCTCGCACCACCCCATTTATCCAAAGCTCCACTTCCTACTCCCAAGTTGAGTGGTTCAAGAGGGAATTTTGATTACCAGAAGCTGTGGAAGACTCCATCAAATCATGGGTTTCTGCCCTGTACAAACCCTACACCTAATTACACCACTCCTGCCGAATCGCGAGGATATCTTTTAGTTCATACAAATGGCGGGCTCAACCAAATGCGTTCTGGGATATGTGATATGGTAGCAGTAGCTCGAATCATAAATGCCACTCTTGTAATTCCAGAACTTGATAAAAGGTCATTTTGGCAAGATACTAGCAATTTCTCTGATATTTTTGACGAAGAGCATTTTATGAATTCTCTAGCTAATGATGTAAAAATCATTAAGAAACTTCCCAAAGAATTGGTTAATGCAACCAGAGTGGTCAAGCAATTCATAAGCTGGTCTGGCATGGATTACTATGAGAATGAGATTGCTAGCTTGTGGGAAGATTACCAAGTTATTCGAGCTTCCAAATCTGATTCACGATTAGCAAACAACAATCTACCTCCAGACATTCAGAAGCTTCGCTGCCGGGCTTGTTATGAAGCACTTCACTTCTCTCCTCTCATTGAACAAATGGGAAAATTGTTGGTGGAGAGGATGAGGTCATTTGGTCTCTATATTGCATTGCATTTGCGTTATGAGAAGGATATGCTCGCATTTAGTGGGTGCACCCATGATTTATCTCTAGTTGAAGCTGAAGAGCTACGGTTGATCAGAGAGAACATTTCCTATTGGAAAATAAAGGACATTGATCCAATAGAACAGAGGTCCAAAGGGCTTTGCTCCTTAACTCCAAAGGAAGTTGGGATTTTTCTTACCGCTCTCGGATACCCATCAACAACTCCAATATATATTGCTGCTGGAGAGATATATGGGGGCGAGTCCCACATGGCTGAACTGCATTCCCGATATCCATTGTTGATGAGCAAGGAAAAGTTGGCATCCATAGAAGAGCTTGAACCTTTTTCTAATCATGCATCCCAAATGGCTGCTCTTGACTATATTGTATCTATTGAAAGTGATGTATTTATACCTTCTTATTCCGGAAATATGGCAAAGGCTGTTGAGGGTCATCGCCGTTTTCTTCGACGTGGAAGAACAGTATCTCCAGACAAGAAAGCCCTTGTTCATCTGTTCGATAAACTGGATCAGGGAATAATAACTGAGGGGAAGAAACTATCAAATAGGATTATTGATCTCCACAGAAGACGACTTGGTTCTCCCAGGAAGAGAAAAGGGCCAATTTCTGGAACAAAGCACATGGACAGGTTTCGGTCAGAAGAAGCCTTTTATGCTAATCCCTTGCCTGATTGTTTATGCCAGACAGAGACATAA

Predicted protein sequences of Glyma.02g209100

Limit To All Plant Sequences

>Glyma.02g209100.1.p sequence-type=predicted peptide transcript=Glyma.02g209100.1 locus=Glyma.02g209100 ID=Glyma.02g209100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQKRKWIPLAVLRKLLIAAICSIAFVALFSVRVHIIPSSKDHRFNDKISTTQDPQSWTRELAPPHLSKAPLPTPKLSGSRGNFDYQKLWKTPSNHGFLPCTNPTPNYTTPAESRGYLLVHTNGGLNQMRSGICDMVAVARIINATLVIPELDKRSFWQDTSNFSDIFDEEHFMNSLANDVKIIKKLPKELVNATRVVKQFISWSGMDYYENEIASLWEDYQVIRASKSDSRLANNNLPPDIQKLRCRACYEALHFSPLIEQMGKLLVERMRSFGLYIALHLRYEKDMLAFSGCTHDLSLVEAEELRLIRENISYWKIKDIDPIEQRSKGLCSLTPKEVGIFLTALGYPSTTPIYIAAGEIYGGESHMAELHSRYPLLMSKEKLASIEELEPFSNHASQMAALDYIVSIESDVFIPSYSGNMAKAVEGHRRFLRRGRTVSPDKKALVHLFDKLDQGIITEGKKLSNRIIDLHRRRLGSPRKRKGPISGTKHMDRFRSEEAFYANPLPDCLCQTET*

>Glyma.02g209100.2.p sequence-type=predicted peptide transcript=Glyma.02g209100.2 locus=Glyma.02g209100 ID=Glyma.02g209100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQKRKWIPLAVLRKLLIAAICSIAFVALFSVRVHIIPSSKDHRFNDKISTTQDPQSWTRELAPPHLSKAPLPTPKLSGSRGNFDYQKLWKTPSNHGFLPCTNPTPNYTTPAESRGYLLVHTNGGLNQMRSGICDMVAVARIINATLVIPELDKRSFWQDTSNFSDIFDEEHFMNSLANDVKIIKKLPKELVNATRVVKQFISWSGMDYYENEIASLWEDYQVIRASKSDSRLANNNLPPDIQKLRCRACYEALHFSPLIEQMGKLLVERMRSFGLYIALHLRYEKDMLAFSGCTHDLSLVEAEELRLIRENISYWKIKDIDPIEQRSKGLCSLTPKEVGIFLTALGYPSTTPIYIAAGEIYGGESHMAELHSRYPLLMSKEKLASIEELEPFSNHASQMAALDYIVSIESDVFIPSYSGNMAKAVEGHRRFLRRGRTVSPDKKALVHLFDKLDQGIITEGKKLSNRIIDLHRRRLGSPRKRKGPISGTKHMDRFRSEEAFYANPLPDCLCQTET*

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