Report for Sequence Feature Glyma.02g208600
Feature Type: gene_model
Chromosome: Gm02
Start: 39363457
stop: 39365713
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.02g208600
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G18490.1 AT
Protein of unknown function (DUF1637)
JGI N/A IEA
GO:0055114 GO-bp
oxidation-reduction process
EnsemblGenomes N/A IEA
GO:0055114 GO-bp
oxidation-reduction process
JGI N/A IEA
GO:0016702 GO-mf
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
EnsemblGenomes N/A IEA
GO:0047800 GO-mf
cysteamine dioxygenase activity
JGI N/A IEA
KOG4281
KOG
Uncharacterized conserved protein
JGI N/A IEA
PTHR22966 Panther
UNCHARACTERIZED
JGI N/A IEA
PF07847 PFAM
Protein of unknown function (DUF1637)
JGI N/A IEA
GN7V-66119 SoyCyc9-rxn
cysteamine dioxygenase
Plant Metabolic Network ISS
Expression Patterns of Glyma.02g208600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.02g208600
Paralog Evidence Comments
Glyma.14g176800 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.02g208600 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma02g37100 Wm82.a1.v1.1 IGC As supplied by JGI
Transcripts of Glyma.02g208600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.02g208600.2 sequence-type=transcript locus=Glyma.02g208600 ID=Glyma.02g208600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CCAAGGTTTGTTTTACGTTATTATTCACAATCCTTTTTTCTCCCTTCTTCACTGTCCCTTCCATTTAATGCCATCAACCAAACCATAATAATCTTATAGTGATGCTTTAAATTTGGTTGGCTACATAACCAGCTAAGGTTAATTATTACTAAGCTTTACTACCCCAAAACAATGGAAAGGAGCAAAATACAAGTGCTTTATGATGCTAGCCATGCCGTGTTTTCTCAAGAGGGGCTTCCAACCTTTCAACAAATCCACTATCTAAAAACTTTGCTAGGAGTCGACGAGTCCGGGTTGTGTGATTCTCCAACATCAGACGCAACCGTTGATagcagcagcagcagcagcaacagcaAGGGTTTGCTTTGTGGACACGGATTCTCTGAGATAACATACATTCACATTCATGAATGTGACTATTTCTCTATGGGTGTATTCTGTCTTCCAGCAGGAAAAGTGTTTCCACTTCATGATCACCCGGGAATGACAGTGTTGAGTAAGCTCTTGTATGGCTCTACCTGTGTCAAAGCTTATGACTGGATCGCATTGGATTGTGCTGGAAGCCAAACAATAGGATTGGCTGGGAGGGTAGTGGATGAAGTAATCAAAGCACCACAGGAACCATCCATATTATTTCCAAGAAGTGGTGGCAATATTCATTCTTTCACAGCGTTGACGCCATGTGCAATACTAGACGTGCTATCTCCACCATACTCTGAAGAGTTTGGAAGGCCTTCCACTTACTTCTCAGATATCCCTATCCCTTCTCTTAATGGTTATGCCATACTTGAAGAGAAACCAATGCCTAGTAACCTAGTTGTTCAAGGAGCACCATACCTTGGACCTTCAATTGTAACCGTTGACCATTACAACTTCGGTCAAATCGATTTTGATAATCACGTGTAAATTGAGTGTCTTTTTTGAACAGTACAAATTAAATAGAATAATACAAAATACTATTCATATATCATATTTAACTAATTCAACTAAATTCTT
Coding sequences of Glyma.02g208600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.02g208600.1 sequence-type=CDS polypeptide=Glyma.02g208600.1.p locus=Glyma.02g208600 ID=Glyma.02g208600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAAGGAGCAAAATACAAGTGCTTTATGATGCTAGCCATGCCGTGTTTTCTCAAGAGGGGCTTCCAACCTTTCAACAAATCCACTATCTAAAAACTTTGCTAGACAAAATTGAAGCTATTGATGTAGGAGTCGACGAGTCCGGGTTGTGTGATTCTCCAACATCAGACGCAACCGTTGATAGCAGCAGCAGCAGCAGCAACAGCAAGGGTTTGCTTTGTGGACACGGATTCTCTGAGATAACATACATTCACATTCATGAATGTGACTATTTCTCTATGGGTGTATTCTGTCTTCCAGCAGGAAAAGTGTTTCCACTTCATGATCACCCGGGAATGACAGTGTTGAGTAAGCTCTTGTATGGCTCTACCTGTGTCAAAGCTTATGACTGGATCGCATTGGATTGTGCTGGAAGCCAAACAATAGGATTGGCTGGGAGGGTAGTGGATGAAGTAATCAAAGCACCACAGGAACCATCCATATTATTTCCAAGAAGTGGTGGCAATATTCATTCTTTCACAGCGTTGACGCCATGTGCAATACTAGACGTGCTATCTCCACCATACTCTGAAGAGTTTGGAAGGCCTTCCACTTACTTCTCAGATATCCCTATCCCTTCTCTTAATGGTTATGCCATACTTGAAGAGAAACCAATGCCTAGTAACCTAGTTGTTCAAGGAGCACCATACCTTGGACCTTCAATTGTAACCGTTGACCATTACAACTTCGGTCAAATCGATTTTGATAATCACGTGTAA
>Glyma.02g208600.2 sequence-type=CDS polypeptide=Glyma.02g208600.2.p locus=Glyma.02g208600 ID=Glyma.02g208600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAAGGAGCAAAATACAAGTGCTTTATGATGCTAGCCATGCCGTGTTTTCTCAAGAGGGGCTTCCAACCTTTCAACAAATCCACTATCTAAAAACTTTGCTAGGAGTCGACGAGTCCGGGTTGTGTGATTCTCCAACATCAGACGCAACCGTTGATAGCAGCAGCAGCAGCAGCAACAGCAAGGGTTTGCTTTGTGGACACGGATTCTCTGAGATAACATACATTCACATTCATGAATGTGACTATTTCTCTATGGGTGTATTCTGTCTTCCAGCAGGAAAAGTGTTTCCACTTCATGATCACCCGGGAATGACAGTGTTGAGTAAGCTCTTGTATGGCTCTACCTGTGTCAAAGCTTATGACTGGATCGCATTGGATTGTGCTGGAAGCCAAACAATAGGATTGGCTGGGAGGGTAGTGGATGAAGTAATCAAAGCACCACAGGAACCATCCATATTATTTCCAAGAAGTGGTGGCAATATTCATTCTTTCACAGCGTTGACGCCATGTGCAATACTAGACGTGCTATCTCCACCATACTCTGAAGAGTTTGGAAGGCCTTCCACTTACTTCTCAGATATCCCTATCCCTTCTCTTAATGGTTATGCCATACTTGAAGAGAAACCAATGCCTAGTAACCTAGTTGTTCAAGGAGCACCATACCTTGGACCTTCAATTGTAACCGTTGACCATTACAACTTCGGTCAAATCGATTTTGATAATCACGTGTAA
Predicted protein sequences of Glyma.02g208600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.02g208600.1.p sequence-type=predicted peptide transcript=Glyma.02g208600.1 locus=Glyma.02g208600 ID=Glyma.02g208600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MERSKIQVLYDASHAVFSQEGLPTFQQIHYLKTLLDKIEAIDVGVDESGLCDSPTSDATVDSSSSSSNSKGLLCGHGFSEITYIHIHECDYFSMGVFCLPAGKVFPLHDHPGMTVLSKLLYGSTCVKAYDWIALDCAGSQTIGLAGRVVDEVIKAPQEPSILFPRSGGNIHSFTALTPCAILDVLSPPYSEEFGRPSTYFSDIPIPSLNGYAILEEKPMPSNLVVQGAPYLGPSIVTVDHYNFGQIDFDNHV*
>Glyma.02g208600.2.p sequence-type=predicted peptide transcript=Glyma.02g208600.2 locus=Glyma.02g208600 ID=Glyma.02g208600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MERSKIQVLYDASHAVFSQEGLPTFQQIHYLKTLLGVDESGLCDSPTSDATVDSSSSSSNSKGLLCGHGFSEITYIHIHECDYFSMGVFCLPAGKVFPLHDHPGMTVLSKLLYGSTCVKAYDWIALDCAGSQTIGLAGRVVDEVIKAPQEPSILFPRSGGNIHSFTALTPCAILDVLSPPYSEEFGRPSTYFSDIPIPSLNGYAILEEKPMPSNLVVQGAPYLGPSIVTVDHYNFGQIDFDNHV*