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Report for Sequence Feature Glyma.02g195500

Feature Type:gene_model
Chromosome:Gm02
Start:38725273
stop:38735374
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g195500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G35920.1AT JGI N/AIEA
3.6.4.13EC RNA helicase JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0004386GO-mf helicase activity JGI N/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
K14442KEGG Messenger RNA biogenesis JGI N/AIEA
PTHR18934PantherFam ATP-DEPENDENT RNA HELICASE JGI N/AIEA
PTHR18934:SF100PantherFam 3'-5' RNA HELICASE YTHDC2 JGI N/AIEA
PF00270Pfam DEAD/DEAH box helicase JGI N/AIEA
PF00271Pfam Helicase conserved C-terminal domain JGI N/AIEA
PF04408Pfam Helicase associated domain (HA2) JGI N/AIEA
PF07717Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold JGI N/AIEA

Gene model name correspondences to Glyma.02g195500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g35240 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g195500
>Glyma.02g195500.1 sequence-type=CDS polypeptide=Glyma.02g195500.1.p locus=Glyma.02g195500 id=Glyma.02g195500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTCGCTGTCTCTACCGCCCTACTTTCTACTACTCCCATACTCATCTCCCTCTCACCTTCCTACACCCGCCCGCACCCGAGCTTTCCCCCACTCACCTTCGGATCTCCTCCTCCGTCATGGCCTACCGCCCCAACTACCGAGGCGGCGGCGGCAGTGGAGCCTCCTCCTCCGCCGCTCGCGGCGGCAGCCGCCGTGGTGGCGGTGGTGGACGTGGCGGTGGCAGCGGAGGACGCGGTGGACGCGGCGAGCAGAGGTGGTGGGACCCTGTTTGGCGCGCCGAGCGCCTGAGGCAACAACAAGCTGAGAAGGAGGTGTTGGATGAGAATGAGTGGTGGGATAAGATAGAGAAGATGAAGAGAGGAGGGGAGCAGGAGATGGTAATTAAGCGTAACTTTAGTATTGCAGACCAGAAAACCCTAGCTGATATTGCCTATCAGCATGAGCTCTACTTCCATGCTTATAGTAAGGGGAAGGTTCTCATTGTTAGCAAAGTTCCATTGCCTGATTATCGTGCAGATCTTGATGAGCGTCATGGATCAACACAGAAAGAGATTAAAATGTCCACAGACATTGAGAGAAGGGTAGGAAATCTTTTGAATAGCTCACAGTCAACTGGGGCAACACTGTCTAGTCTTCCTTCTATATCAGCTGACCTTGGACAAAAACAATCTGCAGCCCCTATAAAATATGTTTCTTCACGACAGACTGATTCTTCTAAGGAGAAACTTAGTGTTGCACTCAAGGAAAGGCAAGAACTTGTACAGGCAAGTGATAGTTTGAAGGAAATGAAATCATTTAGGGAGAAGCTTCCTGCATTTAAAATGAAGTCTGAGTTTCTGAAAGCTGTTCAAGAAAATCAGGTATTAGTAGTTTCAGGAGAGACAGGTTGTGGTAAAACAACACAGTTGCCACAATTCCTTCTGGAAGAAGAAATATCTTGTTTGCGCGGAGCTGATTGCAACATAATTTGTACTCAGCCTCGTCGAGTATCTGCAATTTCTGTTGCAGCTCGAATATCTGCTGAAAGAGGTGAGAGTCTTGGGGAAGCAGTTGGATACCAAATCCGTCTTGAATCAAAACGTTCTGCAGAAACACGCCTTCTTTTCTGCACCACTGGTGTATTACTTCGGCAGTTGGTACAAGACCCAGACTTGACTGGTGTTAGTCATTTGCTGGTGGATGAAATTCATGAAAGAGGCATGAATGAAGACTTTTTAATTATAATTTTACGTGACCTTCTTCCTAGGCGTCCAGATTTGCGTCTCATTCTGATGAGTGCCACCATTAATGCTGATATGTTCTCTAAATACTTTGCAAATGCCCCAACAATGCACATACCGGGATTTACTTACCCTGTGGCAGAGCACTTCCTGGAAGATGTGTTGGAGAAAACTCGATACAGCATCAAGTCAGATTTTGACAATTTTGAGGGGAATTCAAGGAGGAGAAGGAAACAACAGGATTCAAAGAAGGATCCTTTGACTGAAATGTTTGAGGATATTGATGTAGATACTAATTACAAAAATTACAGCTTGGGTGTTAGAAAATCTCTAGAAGCTTGGTCAGGTTCGCAGATTGATTTGGGTTTGGTAGAGGCAACAATTGAGTATATATGTCGCAATGAAGCTGGTGGAGCAATTCTTGTATTTCTCACTGGCTGGGATGAAATTTCTAAACTGCTTGACAAACTTAAAGGAAATAACTTAGTTGGAGACCCTAGCAAGTTCTTAATCCTTCCTTTACATGGCTCAATGCCTACTGTCAACCAATGTGAAATATTTGAACGTCCTCCCCCTAACAAGAGAAAAATCGTGCTAGCAACAAATATTGCTGAGAGTAGCATCACCATAGATGACGTTGTGTATGTCATAGACTGGGGAAAAGCAAAGGAGACCAGCTATGATGCTCTAAATAAGCTTGCTTGCTTGTTGCCATCATGGATTTCAAAGGCTTCAGCTCATCAGAGACGTGGTCGTGCTGGTCGAGTGCAACCTGGAGTTTGCTATAGGTTGTATCCAAAACTGATCCATGATGCAATGCCTCAATATCAGTTAGCTGAAATCCTTCGAACACCTTTGCAAGAGTTGTGCCTTCATATTAAAAGTTTGCAGCTTGGGACTGTAGGATCATTTTTAGAAAAGGCACTTCAGCCACCAGATCCTTTAGCTGTTAAGAATGCTATTGAACTTCTCAAAACAATTGGGGCGTTAGATGAACAGGAAGAGCTCACTCCACTTGGTCAGCATCTTTGTAACATACCTTTGGACCCAAATATAGGGAAGATGCTTCTCATGGGCTCTATCTTTCAGTGCTTAAATCCTGCCTTAACTATTGCTGCCTCTCTTGCTTACCGCAACCCATTTGTCTTACCCATAAACAGAAAAGAGGAAGCCGATGCAGCAAAACAATTTTTTGCTGGTGATTCTTGCAGTGATCACATAGCCCTTCTCAAAGCTTTTGAAGGATGGAAGGAGGCAAAGCGAAGTGGGAACGAAAAGCAGTTTTGTTGGGATAATTTCCTTTCCCCTGCAACCTTGCGGTTGATTGACAATATGAGAATGCAGTTTCTCAATTTATTATCTGACATTGGATTTGTTGACAAGTCCAGGGGTGCTAATGTTTACAACCAGTATAGTCATGATTTGGAGATGGTTTGTGCAATTCTTTGTGCTGGGCTCTACCCTAATGTTGTTCAGTGCAAAAGAAGAGGAAAACGGACAGCATTCTACACTAAAGAAGTAGGGAAGGTTGACATCCATCCTGCTTCTGTTAATGCTGGGATCTATCTCTTCCCTCTTCCCTACATGGTGTATAGTGAAAAGGTGAAAACTACCAGCATCTATATTAAAGACTCTACGAACATTTCAGATTATGCCCTACTTCTATTTGGTGGTAATCTTGTCCCTAGCAAAAGTGGTGAGGGCATTGACATGCTTGGAGGTTACCTTCATTTCTCTGCTTCGAAAAGTGTCATCGAGTTAATAAGGAAACTACGTGGGGAGCTTGACAAGCTTCTGAACAGAAAAATTGAAGAACCAGGATTTGACGTTTCTGCTGAAGGAAAGGGAGTGGTTGCTGCTGCTGTTGAATTGCTGCACAGTCAAGTCATGAGATAA

>Glyma.02g195500.2 sequence-type=CDS polypeptide=Glyma.02g195500.2.p locus=Glyma.02g195500 id=Glyma.02g195500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCCACAGACATTGAGAGAAGGGTAGGAAATCTTTTGAATAGCTCACAGTCAACTGGGGCAACACTGTCTAGTCTTCCTTCTATATCAGCTGACCTTGGACAAAAACAATCTGCAGCCCCTATAAAATATGTTTCTTCACGACAGACTGATTCTTCTAAGGAGAAACTTAGTGTTGCACTCAAGGAAAGGCAAGAACTTGTACAGGCAAGTGATAGTTTGAAGGAAATGAAATCATTTAGGGAGAAGCTTCCTGCATTTAAAATGAAGTCTGAGTTTCTGAAAGCTGTTCAAGAAAATCAGGTATTAGTAGTTTCAGGAGAGACAGGTTGTGGTAAAACAACACAGTTGCCACAATTCCTTCTGGAAGAAGAAATATCTTGTTTGCGCGGAGCTGATTGCAACATAATTTGTACTCAGCCTCGTCGAGTATCTGCAATTTCTGTTGCAGCTCGAATATCTGCTGAAAGAGGTGAGAGTCTTGGGGAAGCAGTTGGATACCAAATCCGTCTTGAATCAAAACGTTCTGCAGAAACACGCCTTCTTTTCTGCACCACTGGTGTATTACTTCGGCAGTTGGTACAAGACCCAGACTTGACTGGTGTTAGTCATTTGCTGGTGGATGAAATTCATGAAAGAGGCATGAATGAAGACTTTTTAATTATAATTTTACGTGACCTTCTTCCTAGGCGTCCAGATTTGCGTCTCATTCTGATGAGTGCCACCATTAATGCTGATATGTTCTCTAAATACTTTGCAAATGCCCCAACAATGCACATACCGGGATTTACTTACCCTGTGGCAGAGCACTTCCTGGAAGATGTGTTGGAGAAAACTCGATACAGCATCAAGTCAGATTTTGACAATTTTGAGGGGAATTCAAGGAGGAGAAGGAAACAACAGGATTCAAAGAAGGATCCTTTGACTGAAATGTTTGAGGATATTGATGTAGATACTAATTACAAAAATTACAGCTTGGGTGTTAGAAAATCTCTAGAAGCTTGGTCAGGTTCGCAGATTGATTTGGGTTTGGTAGAGGCAACAATTGAGTATATATGTCGCAATGAAGCTGGTGGAGCAATTCTTGTATTTCTCACTGGCTGGGATGAAATTTCTAAACTGCTTGACAAACTTAAAGGAAATAACTTAGTTGGAGACCCTAGCAAGTTCTTAATCCTTCCTTTACATGGCTCAATGCCTACTGTCAACCAATGTGAAATATTTGAACGTCCTCCCCCTAACAAGAGAAAAATCGTGCTAGCAACAAATATTGCTGAGAGTAGCATCACCATAGATGACGTTGTGTATGTCATAGACTGGGGAAAAGCAAAGGAGACCAGCTATGATGCTCTAAATAAGCTTGCTTGCTTGTTGCCATCATGGATTTCAAAGGCTTCAGCTCATCAGAGACGTGGTCGTGCTGGTCGAGTGCAACCTGGAGTTTGCTATAGGTTGTATCCAAAACTGATCCATGATGCAATGCCTCAATATCAGTTAGCTGAAATCCTTCGAACACCTTTGCAAGAGTTGTGCCTTCATATTAAAAGTTTGCAGCTTGGGACTGTAGGATCATTTTTAGAAAAGGCACTTCAGCCACCAGATCCTTTAGCTGTTAAGAATGCTATTGAACTTCTCAAAACAATTGGGGCGTTAGATGAACAGGAAGAGCTCACTCCACTTGGTCAGCATCTTTGTAACATACCTTTGGACCCAAATATAGGGAAGATGCTTCTCATGGGCTCTATCTTTCAGTGCTTAAATCCTGCCTTAACTATTGCTGCCTCTCTTGCTTACCGCAACCCATTTGTCTTACCCATAAACAGAAAAGAGGAAGCCGATGCAGCAAAACAATTTTTTGCTGGTGATTCTTGCAGTGATCACATAGCCCTTCTCAAAGCTTTTGAAGGATGGAAGGAGGCAAAGCGAAGTGGGAACGAAAAGCAGTTTTGTTGGGATAATTTCCTTTCCCCTGCAACCTTGCGGTTGATTGACAATATGAGAATGCAGTTTCTCAATTTATTATCTGACATTGGATTTGTTGACAAGTCCAGGGGTGCTAATGTTTACAACCAGTATAGTCATGATTTGGAGATGGTTTGTGCAATTCTTTGTGCTGGGCTCTACCCTAATGTTGTTCAGTGCAAAAGAAGAGGAAAACGGACAGCATTCTACACTAAAGAAGTAGGGAAGGTTGACATCCATCCTGCTTCTGTTAATGCTGGGATCTATCTCTTCCCTCTTCCCTACATGGTGTATAGTGAAAAGGTGAAAACTACCAGCATCTATATTAAAGACTCTACGAACATTTCAGATTATGCCCTACTTCTATTTGGTGGTAATCTTGTCCCTAGCAAAAGTGGTGAGGGCATTGACATGCTTGGAGGTTACCTTCATTTCTCTGCTTCGAAAAGTGTCATCGAGTTAATAAGGAAACTACGTGGGGAGCTTGACAAGCTTCTGAACAGAAAAATTGAAGAACCAGGATTTGACGTTTCTGCTGAAGGAAAGGGAGTGGTTGCTGCTGCTGTTGAATTGCTGCACAGTCAAGTCATGAGATAA
Predicted protein sequences of Glyma.02g195500
>Glyma.02g195500.1.p sequence-type=predicted peptide transcript=Glyma.02g195500.1 locus=Glyma.02g195500 id=Glyma.02g195500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPRCLYRPTFYYSHTHLPLTFLHPPAPELSPTHLRISSSVMAYRPNYRGGGGSGASSSAARGGSRRGGGGGRGGGSGGRGGRGEQRWWDPVWRAERLRQQQAEKEVLDENEWWDKIEKMKRGGEQEMVIKRNFSIADQKTLADIAYQHELYFHAYSKGKVLIVSKVPLPDYRADLDERHGSTQKEIKMSTDIERRVGNLLNSSQSTGATLSSLPSISADLGQKQSAAPIKYVSSRQTDSSKEKLSVALKERQELVQASDSLKEMKSFREKLPAFKMKSEFLKAVQENQVLVVSGETGCGKTTQLPQFLLEEEISCLRGADCNIICTQPRRVSAISVAARISAERGESLGEAVGYQIRLESKRSAETRLLFCTTGVLLRQLVQDPDLTGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLILMSATINADMFSKYFANAPTMHIPGFTYPVAEHFLEDVLEKTRYSIKSDFDNFEGNSRRRRKQQDSKKDPLTEMFEDIDVDTNYKNYSLGVRKSLEAWSGSQIDLGLVEATIEYICRNEAGGAILVFLTGWDEISKLLDKLKGNNLVGDPSKFLILPLHGSMPTVNQCEIFERPPPNKRKIVLATNIAESSITIDDVVYVIDWGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYRLYPKLIHDAMPQYQLAEILRTPLQELCLHIKSLQLGTVGSFLEKALQPPDPLAVKNAIELLKTIGALDEQEELTPLGQHLCNIPLDPNIGKMLLMGSIFQCLNPALTIAASLAYRNPFVLPINRKEEADAAKQFFAGDSCSDHIALLKAFEGWKEAKRSGNEKQFCWDNFLSPATLRLIDNMRMQFLNLLSDIGFVDKSRGANVYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTAFYTKEVGKVDIHPASVNAGIYLFPLPYMVYSEKVKTTSIYIKDSTNISDYALLLFGGNLVPSKSGEGIDMLGGYLHFSASKSVIELIRKLRGELDKLLNRKIEEPGFDVSAEGKGVVAAAVELLHSQVMR*

>Glyma.02g195500.2.p sequence-type=predicted peptide transcript=Glyma.02g195500.2 locus=Glyma.02g195500 id=Glyma.02g195500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSTDIERRVGNLLNSSQSTGATLSSLPSISADLGQKQSAAPIKYVSSRQTDSSKEKLSVALKERQELVQASDSLKEMKSFREKLPAFKMKSEFLKAVQENQVLVVSGETGCGKTTQLPQFLLEEEISCLRGADCNIICTQPRRVSAISVAARISAERGESLGEAVGYQIRLESKRSAETRLLFCTTGVLLRQLVQDPDLTGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLILMSATINADMFSKYFANAPTMHIPGFTYPVAEHFLEDVLEKTRYSIKSDFDNFEGNSRRRRKQQDSKKDPLTEMFEDIDVDTNYKNYSLGVRKSLEAWSGSQIDLGLVEATIEYICRNEAGGAILVFLTGWDEISKLLDKLKGNNLVGDPSKFLILPLHGSMPTVNQCEIFERPPPNKRKIVLATNIAESSITIDDVVYVIDWGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYRLYPKLIHDAMPQYQLAEILRTPLQELCLHIKSLQLGTVGSFLEKALQPPDPLAVKNAIELLKTIGALDEQEELTPLGQHLCNIPLDPNIGKMLLMGSIFQCLNPALTIAASLAYRNPFVLPINRKEEADAAKQFFAGDSCSDHIALLKAFEGWKEAKRSGNEKQFCWDNFLSPATLRLIDNMRMQFLNLLSDIGFVDKSRGANVYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTAFYTKEVGKVDIHPASVNAGIYLFPLPYMVYSEKVKTTSIYIKDSTNISDYALLLFGGNLVPSKSGEGIDMLGGYLHFSASKSVIELIRKLRGELDKLLNRKIEEPGFDVSAEGKGVVAAAVELLHSQVMR*






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