SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g183000

Feature Type:gene_model
Chromosome:Gm02
Start:33333161
stop:33337270
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g183000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G41850.1AT ADPG2,PGAZAT JGI N/AIEA
3.2.1.15EC endo-polygalacturonase JGI N/AIEA
K01213KEGG Pentose and glucuronate interconversions JGI N/AIEA
PTHR31375PantherFam FAMILY NOT NAMED JGI N/AIEA
PF12708Pfam Pectate lyase superfamily protein JGI N/AIEA

Gene model name correspondences to Glyma.02g183000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g31540 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g183000
>Glyma.02g183000.1 sequence-type=CDS polypeptide=Glyma.02g183000.1.p locus=Glyma.02g183000 id=Glyma.02g183000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCCTCCAAAGGCATCACCTCTCGTTACTTTTTATCATGTTTTCTTTTGTTGCTTGTCATAGCACCGTGCTATTTGATGATGGTAGTACGTTCAAGGACTTTATCAAACAAAAGAGTACAGATGTTTTGAGCTTAAAGAAATTTGTCAAGTTGGGTGACATTTCTTCTTCGCTTAAAACGGTTAACGTCAATGATTATGGAGCTCGTGGAGATGGCAAAACTGATGACACTCAGGCATTCAATGACGCTTGGGAAGTAGCATGTTCTTCTGGGGGTGCAGTTCTTCTGGTGCCTGAGAATAATTATCTACTCAAGCCATTCAGATTTTCTGGCCCTTGCAGATCCAACATCGAAGTCCAGATTTCTGGAACCATTGAAGCATCAGAAAACCTATCAGATTACAGCGAAGATCTCACTCACTGGCTTACTTTCGACAGTGTTGAGAAACTATCAGTTAAAGGTGGTGGTACCATCCATGGAAATGGGAACATATGGTGGCAAAACTCATGCAAAGTGAACGAAAAGCTTCCTTGCAAGGATGCCCCTACGGCATTGACTTTCTACAAGTGCAACGATTTGACAGTGGAGGATTTGACGATAAAAAATGGCCAAAAGATGCAAGTTTCATTCCAAGACTCTGAGAATGTTAAAGTTTCCGGTCTCACTGTGACAGCACCGGGGGATAGCCCAAACACTGATGGAATTCATGTCACAAACACCCAAAACATTCAAATCTCAAGCTCCGTTATAGGAACTGGTGATGATTGTATATCGATTGTAAGTGGATCCAAGGATGTACTAGCCACAGACATAATCTGCGGACCAGGCCATGGTATCAGCATCGGAAGCCTAGGGGCTGGGGGATCCAAGGACTTCGTTTCAGGAATAACGGTGAAAGGAGCTATGCTTTCCGGAACTACAAATGGACTAAGAATTAAGACATGGCAGGGAGGGTCAGGAAGTGCAAGCAATATCCAATTTCAGAACATTCAAATGGACAATGTGACCAACCCCATCATAATAGATCAAAATTATTGTGATCAAGAGACACCATGCGAAGAACAAAAATCCGCTGTTCAGATTAGGAACGTGATGTACCAAAACATAAAGGGCACAAGTGCTTCTGATGTGGGTGTGCAATTTGATTGCAGCAACAACTTTCCATGCCAGGGGATAGTGTTGCAGAACATAGACTTGCAACTTGAAGGTGGAGGAGGGGCCAAGGCTTCATGCAACAGTGTTGAATTGTCCTACAGAGGAGATGTTATCCCTCTCTGCCCATAG
Predicted protein sequences of Glyma.02g183000
>Glyma.02g183000.1.p sequence-type=predicted peptide transcript=Glyma.02g183000.1 locus=Glyma.02g183000 id=Glyma.02g183000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MALQRHHLSLLFIMFSFVACHSTVLFDDGSTFKDFIKQKSTDVLSLKKFVKLGDISSSLKTVNVNDYGARGDGKTDDTQAFNDAWEVACSSGGAVLLVPENNYLLKPFRFSGPCRSNIEVQISGTIEASENLSDYSEDLTHWLTFDSVEKLSVKGGGTIHGNGNIWWQNSCKVNEKLPCKDAPTALTFYKCNDLTVEDLTIKNGQKMQVSFQDSENVKVSGLTVTAPGDSPNTDGIHVTNTQNIQISSSVIGTGDDCISIVSGSKDVLATDIICGPGHGISIGSLGAGGSKDFVSGITVKGAMLSGTTNGLRIKTWQGGSGSASNIQFQNIQMDNVTNPIIIDQNYCDQETPCEEQKSAVQIRNVMYQNIKGTSASDVGVQFDCSNNFPCQGIVLQNIDLQLEGGGGAKASCNSVELSYRGDVIPLCP*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo