SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g181300

Feature Type:gene_model
Chromosome:Gm02
Start:30974188
stop:30982074
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.02g181300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G57650.1AT lysophosphatidyl acyltransferase 2 JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0016746GO-mf transferase activity, transferring acyl groups EnsemblGenomesN/AIEA
GO:0016746GO-mf transferase activity, transferring acyl groups JGI N/AIEA
KOG1505 KOG Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases JGI N/AIEA
PTHR10983Panther 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED JGI N/AIEA
PTHR10983:SF1Panther JGI N/AIEA
PF01553PFAM Acyltransferase JGI N/AIEA
PHOSLIPSYN2-PWYSoyCyc9 superpathway of phospholipid biosynthesis II (plants) Plant Metabolic Network ISS
PWY-5667SoyCyc9 CDP-diacylglycerol biosynthesis I Plant Metabolic Network ISS
PWY-7417SoyCyc9 phospholipid remodeling (phosphatidate, yeast) Plant Metabolic Network ISS
PWY4FS-8SoyCyc9 phosphatidylglycerol biosynthesis II (non-plastidic) Plant Metabolic Network ISS
TRIGLSYN-PWYSoyCyc9 diacylglycerol and triacylglycerol biosynthesis Plant Metabolic Network ISS
GN7V-44723SoyCyc9-rxn 1-acylglycerol-3-phosphate O-acyltransferase Plant Metabolic Network ISS

Expression Patterns of Glyma.02g181300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.02g181300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g31320 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.02g181300
>Glyma.02g181300.2 sequence-type=transcript locus=Glyma.02g181300 ID=Glyma.02g181300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGCTAGAATTAGTGATTATGAAACTCATGGGTTATACTTGTTCCTACATTGCTCAAGGGCTTGAAATTATTGCAATAGAATGTTTAGTTCATTTAGTGATTAGCAGTTTTGCGCACTGACACTATGTGATCTTTTTGTTCACGATTTTAAGGAATTTTGCCTTAAAATAGAGGGAAGATCTTGTGCAGTGCTAATAGGGTCCATATGGGGGGAAACTGGAGCGAGGATTACAAGGATTTGTTATTTTTCTTATTTTTGGGCTTACTTTACCCCTCCTTTTGTGATAAATTTTGGTTTTCTTTTATTTCCCTTAGCCACAAAGCTATGAAAGAAGTAGAGATTTAGGGAGGCTGGATATTACTGTGCTTGCAAGTCATGATCTACCAACCAATTTGGCACAGGGACTCATTCTTTTCTCTTTTTGATAGAGCTTCTTTTCATTTAAACTAAAAGGTTCAGAGATTTCTGATTTCAGAATGGAATTTAACCATGTGAAATGAAAGGTCCAAGTATTCACAGATCCTGAAACCTTTCATTCAATGGGTAAAGAGCATGCTCTTGTCATATCCAATCACAGAAGTGACATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGCCTTGGCAGCACACTTGCTGTGATGAAGAAATCTTCAAAGTTTCTACCGGTCATTGGTTGGTCAATGTGGTTTTCTGAATATCTTTTCCTGGAGAGAAGTTGGGCCAAGGATGAACGCACATTAAAGTCAGGCCTACAGCAACTGAGGGATTTCCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACTCGCTTTACCCAGGCCAAACTATTAGCTGCTCAGGAGTATGCAGCCTCAGCTGGATTGCCTGTTCCAAGAAATGTTTTGATTCCAAGAACTAAGGGTTTTGTTTCAGCAGTAAACCATATGCGCTCGTTTGTTCCTGCCATTTATGATGTAACTGTGGCAATTCCCAAGAGTTCACCTGCTCCTACAATGCTAAGACTCTTCAGAGGGAAATCTTCATTGGTGCATGTGCATATTAAGCGGCATGCGATGAAGGATTTGCCAGAAGAAGATGAAGCTGTTGCTCAATGGTGTCGAGATGTGTTTGTGGCTAAGGATGCATTGTTAGACAAACATATAGCTGAGGACACATTTAGTGATCAAGAGCTGCAGGATACTGGTCGACCCGTAAAGTCTCTTGTGGTTGTCATATTGTGGGCTTGTGTCGTTGTTACGGGGGTCGTAAAGTTCCTCCAATGGTCTTCACTACTATCCTCCTGGAAGGGTGTTGCATTTTCAGCATTTGGTTTGGGAGTTGTCACTCTACTCATGCACATCTTGATCATGTTCTCACAATCTGAGCGTTCAACCCCTTCCAAGGTTGCCCCTACAAAAAAGTCCAAGAATAGCGAACAACTGGAAGCTAGGGATAACAAACAAGACTAGATCACACACGTTACCTGAATATTCTATACATAAGAGAATTCTTCTGAGGTCACATCTTGAACTTGTTTTGCATTTATGTGCTTTTTTTTATAAAAAAAATTGCATTAACGTGTGTTTAGGGACTCACTACCCCCTTTCTTTATTTGTTTGCTTTGGAATTGTACCTCGTATGTGTTCAGTTCTTGTATTATGTATTATGCATATACTATTCATTACTTTCAAATTAATTAGGATGAATTTGTATAGACTAATATATAGGAATGGCGTACAAAAATCCTACCTAACATCGCAGTTTTTTAGGGACTTGTACACTTTCTGGTATTGGACTATTAATTTTGTGGTT
Coding sequences of Glyma.02g181300
>Glyma.02g181300.1 sequence-type=CDS polypeptide=Glyma.02g181300.1.p locus=Glyma.02g181300 ID=Glyma.02g181300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACTGCAGTTGTGGTCGTCCCATTGGGCCTTCTCTTCTTCGCTTCCGGCCTCATCGTTAACCTCATTCAGGCAATATGCTACGTGGTTGTGCGGCCGGTGTCAAAGAATTTGTACCGGCGGATGAACAGGGTGGTGGCTGAACTGCTGTGGCTGGAGCTCGTTTGGATTATTGATTGGTGGGCTGGTGTTAAGGTCCAAGTATTCACAGATCCTGAAACCTTTCATTCAATGGGTAAAGAGCATGCTCTTGTCATATCCAATCACAGAAGTGACATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGCCTTGGCAGCACACTTGCTGTGATGAAGAAATCTTCAAAGTTTCTACCGGTCATTGGTTGGTCAATGTGGTTTTCTGAATATCTTTTCCTGGAGAGAAGTTGGGCCAAGGATGAACGCACATTAAAGTCAGGCCTACAGCAACTGAGGGATTTCCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACTCGCTTTACCCAGGCCAAACTATTAGCTGCTCAGGAGTATGCAGCCTCAGCTGGATTGCCTGTTCCAAGAAATGTTTTGATTCCAAGAACTAAGGGTTTTGTTTCAGCAGTAAACCATATGCGCTCGTTTGTTCCTGCCATTTATGATGTAACTGTGGCAATTCCCAAGAGTTCACCTGCTCCTACAATGCTAAGACTCTTCAGAGGGAAATCTTCATTGGTGCATGTGCATATTAAGCGGCATGCGATGAAGGATTTGCCAGAAGAAGATGAAGCTGTTGCTCAATGGTGTCGAGATGTGTTTGTGGCTAAGGATGCATTGTTAGACAAACATATAGCTGAGGACACATTTAGTGATCAAGAGCTGCAGGATACTGGTCGACCCGTAAAGTCTCTTGTGGTTGTCATATTGTGGGCTTGTGTCGTTGTTACGGGGGTCGTAAAGTTCCTCCAATGGTCTTCACTACTATCCTCCTGGAAGGGTGTTGCATTTTCAGCATTTGGTTTGGGAGTTGTCACTCTACTCATGCACATCTTGATCATGTTCTCACAATCTGAGCGTTCAACCCCTTCCAAGGTTGCCCCTACAAAAAAGTCCAAGAATAGCGAACAACTGGAAGCTAGGGATAACAAACAAGACTAG

>Glyma.02g181300.2 sequence-type=CDS polypeptide=Glyma.02g181300.2.p locus=Glyma.02g181300 ID=Glyma.02g181300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTAAAGAGCATGCTCTTGTCATATCCAATCACAGAAGTGACATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGCCTTGGCAGCACACTTGCTGTGATGAAGAAATCTTCAAAGTTTCTACCGGTCATTGGTTGGTCAATGTGGTTTTCTGAATATCTTTTCCTGGAGAGAAGTTGGGCCAAGGATGAACGCACATTAAAGTCAGGCCTACAGCAACTGAGGGATTTCCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACTCGCTTTACCCAGGCCAAACTATTAGCTGCTCAGGAGTATGCAGCCTCAGCTGGATTGCCTGTTCCAAGAAATGTTTTGATTCCAAGAACTAAGGGTTTTGTTTCAGCAGTAAACCATATGCGCTCGTTTGTTCCTGCCATTTATGATGTAACTGTGGCAATTCCCAAGAGTTCACCTGCTCCTACAATGCTAAGACTCTTCAGAGGGAAATCTTCATTGGTGCATGTGCATATTAAGCGGCATGCGATGAAGGATTTGCCAGAAGAAGATGAAGCTGTTGCTCAATGGTGTCGAGATGTGTTTGTGGCTAAGGATGCATTGTTAGACAAACATATAGCTGAGGACACATTTAGTGATCAAGAGCTGCAGGATACTGGTCGACCCGTAAAGTCTCTTGTGGTTGTCATATTGTGGGCTTGTGTCGTTGTTACGGGGGTCGTAAAGTTCCTCCAATGGTCTTCACTACTATCCTCCTGGAAGGGTGTTGCATTTTCAGCATTTGGTTTGGGAGTTGTCACTCTACTCATGCACATCTTGATCATGTTCTCACAATCTGAGCGTTCAACCCCTTCCAAGGTTGCCCCTACAAAAAAGTCCAAGAATAGCGAACAACTGGAAGCTAGGGATAACAAACAAGACTAG
Predicted protein sequences of Glyma.02g181300
>Glyma.02g181300.1.p sequence-type=predicted peptide transcript=Glyma.02g181300.1 locus=Glyma.02g181300 ID=Glyma.02g181300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTAVVVVPLGLLFFASGLIVNLIQAICYVVVRPVSKNLYRRMNRVVAELLWLELVWIIDWWAGVKVQVFTDPETFHSMGKEHALVISNHRSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDERTLKSGLQQLRDFPLPFWLALFVEGTRFTQAKLLAAQEYAASAGLPVPRNVLIPRTKGFVSAVNHMRSFVPAIYDVTVAIPKSSPAPTMLRLFRGKSSLVHVHIKRHAMKDLPEEDEAVAQWCRDVFVAKDALLDKHIAEDTFSDQELQDTGRPVKSLVVVILWACVVVTGVVKFLQWSSLLSSWKGVAFSAFGLGVVTLLMHILIMFSQSERSTPSKVAPTKKSKNSEQLEARDNKQD*

>Glyma.02g181300.2.p sequence-type=predicted peptide transcript=Glyma.02g181300.2 locus=Glyma.02g181300 ID=Glyma.02g181300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGKEHALVISNHRSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDERTLKSGLQQLRDFPLPFWLALFVEGTRFTQAKLLAAQEYAASAGLPVPRNVLIPRTKGFVSAVNHMRSFVPAIYDVTVAIPKSSPAPTMLRLFRGKSSLVHVHIKRHAMKDLPEEDEAVAQWCRDVFVAKDALLDKHIAEDTFSDQELQDTGRPVKSLVVVILWACVVVTGVVKFLQWSSLLSSWKGVAFSAFGLGVVTLLMHILIMFSQSERSTPSKVAPTKKSKNSEQLEARDNKQD*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo