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Report for Sequence Feature Glyma.02g181200

Feature Type:gene_model
Chromosome:Gm02
Start:32759724
stop:32776886
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g181200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G57660.1AT NRPA1 JGI N/AIEA
2.7.7.6EC DNA-directed RNA polymerase JGI N/AIEA
GO:0006351GO-bp transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003899GO-mf DNA-directed 5'-3' RNA polymerase activity JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
PTHR19376PantherFam DNA-DIRECTED RNA POLYMERASE JGI N/AIEA
PTHR19376:SF11PantherFam DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA1 JGI N/AIEA
PF00623Pfam RNA polymerase Rpb1, domain 2 JGI N/AIEA
PF04983Pfam RNA polymerase Rpb1, domain 3 JGI N/AIEA
PF04997Pfam RNA polymerase Rpb1, domain 1 JGI N/AIEA
PF04998Pfam RNA polymerase Rpb1, domain 5 JGI N/AIEA
PF05000Pfam RNA polymerase Rpb1, domain 4 JGI N/AIEA

Gene model name correspondences to Glyma.02g181200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g31295 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g181200
>Glyma.02g181200.1 sequence-type=CDS polypeptide=Glyma.02g181200.1.p locus=Glyma.02g181200 id=Glyma.02g181200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTTCTCTCAACCGAGGGCGCAACAAACTCCGTCGAGGTGGTGGCGTTCAGTTTCCTAACGGACGACGAGATACGGCGGAGCAGCCGCGTGAAGATAACGAACCCGATTCTGATTTTTAATTTAAGTTGTACTTATTTTACATGTCTTGAATTGAGTTGTAAGTCTTGTGGTCAAACAACTAAACATTGCCCAGATCATTTTGGTCACATTGAGCTTGTTTCCCCTGTCTACAACCCTTTGACGTTCAATATTCCTAGCAATATTCTACAAAGAACTTGTTTCTCTTGCCATCATTTTCAGTCCCTTAGAAAAGAGGTGGATATTCGTGCATTCCAATTGGAGCTTATAATGAAAGGGGATATTATCATGGCCAAAAATTTGGAATCTATTATCACAGAAAAAAGCAATTCTGTTCTAAGGAAATTCCTGACGAAAAAACATAAGTGTCAAGAATGTGGAGCTGAGAATCCTAGAATCAGTAAACCAACCTTTGGATGGTTTTATATGGTTTTACAATGCAATATATCCTTGGGAGATGCCCATCTAAATAAGTCAGATCCCTCAAAGGTTCTAAGCTGGTGGATGGATCTTCAGCAATCTGTAAACATGCTATTTGACAATAAAACTGCTTCTGGCAAGAGAGATGTGGCTACTGGAATTTGTCGATTGCTGGAGAAGAAGGAAGGCATCTTTCGGCAGAAAATGATGGGAAAGATGGTTTATTTTGCATGTCGCTCTGTCATATCACCAGATCCTTATTTAGCAGTCAATGAAATTGGGATTCCCCCATATTTTGCTTTAAGATTATCAGTGACTCCTTGGAATGTAGTGAAGTTAAGGAATGCTATCCTTAATGGTGCTGAATCCCATCCCAGTGCTTCTCATTATGCTGATAAAGTATCAATAGTCAAGCTTCCACCAAAAGGGAAGGAGATATCTGACCATGAGTTTGAAGGGAAAGTTGTTTATCGCCACTTGAAGGATGGCGATGTTGTGCTTGCCAATCGACAGCCAACACTCCATAAACCTAGTATAATGGCACATATAGTTCGCGTTCTAAAGGGGGAGAAAACTGTACGCATGCACTATGCAAACTGTAGGGTTACTACAGTTAATAACTTCTTTGTTTTATTTTTTCCCCTTCGTGATCTCTGTACTTATAATGCTGATTTTGATGGTGATGAGATTAATGTTCATTTTCCACAAGATGAAATTTCTCGGGCTGAAGCTTACAATATTGTAAATGCTAACAATCAATATGTGAAACCTACAAGTGGGGATCCAATCAGAGCTTTGATTCAGGATCATATTGTAAGTGCTGCTCTTCTTACAAAAAAGGATACTTTTCTAAGCTATGAAGAGTTCAATCAACTACTGTACAGTTCTGGTGTATCCATGGCTGGGCTAGGCTCATTCTATGGCAAACATGGGCAGAAAGTTTTCATGTCAAATTCTGAGAGTGAAATGTTTCTTGCATTGCTATACTATATCACCAGAGGTTCACCATCATTTACTGTTGAGAAGAATGCAAAAATCCCATCTAATTTTTTCAAGACTCGGATCAGGAAGGGGAAAAGATACACTCAAGATACATCAAAAAAGAAGGAAAAGCCTGATGAGGATAAATTATTGATATATAAAAATGACTTGGTGCTGCAAGAACTTTATGGATCAAATGTTGCTGGCAACCTACTTTCCGCATTAAGTCGGTTATTCACTACCTTTTTACAGATGCATGGGTTCACATGTGGAGTAGATGATCTTATGTTAACAGAAGGAAAGGATGTTGAAAGAATGAATCAGCTTAATAGTTGTGAGATAATTGGTAACAGTGTTCATCGTGAATTCATTAGAGTGAAGAATAGTGACAATATAGATTCAGTCACATTGCAATTGAATATTGAGAAAAAAATACGCAGTAATGGAGAAGCAACCTTAACATCAGATAGGAAGATGACAAACAAGCTTAACTCAACAACAAGCTCAGGTATATTAAAGGAGCTACTATCTGAAGGAATATTGCAACCTTCAGGAAAAAATTGTATTTCTCTTATGACTACATCTGGAGCTAAGGGTAGTATGGTAAATTTCCAGCAGATATCTTCTCATCTAGGCCAGCAAGAGTTGGAAGGAAAACGAGTCCCACGCATGGTTTCTGGAAAGACCTTACCCTGCTTTCCTCCCTGGGATTGTTCCCCTAGAGCAGGAGGGTTCATTATTGATCGGTTTCTTACTGCCCTTCACCCTCAGGAATACTACTTTTTTGATACTGCAGTCAAAACATCTCGGAGTGGTTACCTGCAAAGATGCCTAATGAAAAACCTTGAGTGTCTTAAAGTTTGTTATGACCATACTGTCCGTGATGCTGATGGTTCAATTATTCAGTTTCACTATGGAGAAGATGGTGTTGATAATAAAGAATTGGTTTATAGCAACTATTGCCGTCAGCTAGACAGATCCAGTCCATATATTAACAAATTACCTGATGCTCTTGAAGGAAAAGCAGAAAAATTCTCAAAACAGAGAAATCTTGGTTCTATGGAGCATGCAGATTTCGTAAGATTGATAGAGCATAAGTATGTCTCATGTCTCACTCAACCAGGTGAACCAGTTGGTGTATTAGCTTCTCAATCTGTTGGAGAACCGGCAACGCAGATGACAGAGAGAGGGGAGGAATCAAGTTACTCCAAGAGTAACTCTAAAATGAGTTTTCTTTTAATTGTTTTAACGAAAATCCTGATGGCTGCTGCACGTGATATCAAAACTCCATTTATGACATGCCCCTTGAGACATGAGAAATCTATAAATTTGAAGAAGATCACTGTAGCTGACATAATTAAGAGTATGAAAGTTTCTGTTGTACCAGTAACTGTTCTTGGTGGTCAGATTTGCAGTATATATAAACTTGTAATGAAGCTATATAAATCTAAACAGTATCCAGAATATACTGATATTACCCTTGAAGACTGGGAGGAAACTCTAAGGGTTAACTTTGTGAGAGACTCTGAAGATGCTCACGACAATGGATCAGAATCTGAGAAAAAAGGTCAAAGTAATGATGAAGATGATGATGGTGTTGTTGTTGAAGACACTGAAGGGAATGAAGATCTTGGATCAGATGCACAAAAGAGAAAACTACAAGGTACTGATGAGGTTGATTATGAGGATGGTCCTGAAGAGGAAACACATGATGAAAAGAAAAAATCTGAACCAACAAAAAGATATGACTGGGCAATTTTTGTGGAAGCTAAAGGGATGCATTTTGAGATCCACTTTAGATTTACTGGTGAACCTCACATTTTGTTAACTCAGATTGTTCAGAGAACAGCCAAGAAGTTTTGCCTCCAAAATTTTGGAAAGGTTGGTGAATGTAAAGCTATTACATGTAAAGAAAGTGGAGTAATCTACTATGGTAAAGATGACAGAAAAGGGGATGAGATTTCAGCCTTTGAGAAAGAAGAAATACCAGCACTTCAGACATCAGGGGTACATTTTAAAACATTTTGGGAGTTGGAAGATGATCTGGATGTGAGGTACATTTATTCAAACAACGTGCTTGCTATGCTAAATGCTTATGGGGTGGAAGCAGCCAGGGAGACCATCATCAGGGAAGTACAGAATCTCAATGCCGACTTTATGACACACTCTGGTGGCTACTGCCTGATGAACAGAACGGGGAGCATAGCAGACTCAACATCCCTTTTCATCAAAATGTGCTTTGAGACAGCTGCCAAATTTATTGTTGAAGCAGCTTATCATGGGCAAGTGGACAATTTGGAGACACCATCTGCTAGAATTTGTATTGGTTTGCCAGTGAAGATGGGAACTGGGTGCCATGACTTGATACAGAAGCTGGAGATATGA

>Glyma.02g181200.4 sequence-type=CDS polypeptide=Glyma.02g181200.4.p locus=Glyma.02g181200 id=Glyma.02g181200.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATACATAGAGTGCAAGAACTTTATGGATCAAATGTTGCTGGCAACCTACTTTCCGCATTAAGTCGGTTATTCACTACCTTTTTACAGATGCATGGGTTCACATGTGGAGTAGATGATCTTATGTTAACAGAAGGAAAGGATGTTGAAAGAATGAATCAGCTTAATAGTTGTGAGATAATTGGTAACAGTGTTCATCGTGAATTCATTAGAGTGAAGAATAGTGACAATATAGATTCAGTCACATTGCAATTGAATATTGAGAAAAAAATACGCAGTAATGGAGAAGCAACCTTAACATCAGATAGGAAGATGACAAACAAGCTTAACTCAACAACAAGCTCAGGTATATTAAAGGAGCTACTATCTGAAGGAATATTGCAACCTTCAGGAAAAAATTGTATTTCTCTTATGACTACATCTGGAGCTAAGGGTAGTATGGTAAATTTCCAGCAGATATCTTCTCATCTAGGCCAGCAAGAGTTGGAAGGAAAACGAGTCCCACGCATGGTTTCTGGAAAGACCTTACCCTGCTTTCCTCCCTGGGATTGTTCCCCTAGAGCAGGAGGGTTCATTATTGATCGGTTTCTTACTGCCCTTCACCCTCAGGAATACTACTTTTGTGACACCCTCTACCCCTCACATATATACTAA
Predicted protein sequences of Glyma.02g181200
>Glyma.02g181200.1.p sequence-type=predicted peptide transcript=Glyma.02g181200.1 locus=Glyma.02g181200 id=Glyma.02g181200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVLSTEGATNSVEVVAFSFLTDDEIRRSSRVKITNPILIFNLSCTYFTCLELSCKSCGQTTKHCPDHFGHIELVSPVYNPLTFNIPSNILQRTCFSCHHFQSLRKEVDIRAFQLELIMKGDIIMAKNLESIITEKSNSVLRKFLTKKHKCQECGAENPRISKPTFGWFYMVLQCNISLGDAHLNKSDPSKVLSWWMDLQQSVNMLFDNKTASGKRDVATGICRLLEKKEGIFRQKMMGKMVYFACRSVISPDPYLAVNEIGIPPYFALRLSVTPWNVVKLRNAILNGAESHPSASHYADKVSIVKLPPKGKEISDHEFEGKVVYRHLKDGDVVLANRQPTLHKPSIMAHIVRVLKGEKTVRMHYANCRVTTVNNFFVLFFPLRDLCTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFMSNSESEMFLALLYYITRGSPSFTVEKNAKIPSNFFKTRIRKGKRYTQDTSKKKEKPDEDKLLIYKNDLVLQELYGSNVAGNLLSALSRLFTTFLQMHGFTCGVDDLMLTEGKDVERMNQLNSCEIIGNSVHREFIRVKNSDNIDSVTLQLNIEKKIRSNGEATLTSDRKMTNKLNSTTSSGILKELLSEGILQPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFFDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDNKELVYSNYCRQLDRSSPYINKLPDALEGKAEKFSKQRNLGSMEHADFVRLIEHKYVSCLTQPGEPVGVLASQSVGEPATQMTERGEESSYSKSNSKMSFLLIVLTKILMAAARDIKTPFMTCPLRHEKSINLKKITVADIIKSMKVSVVPVTVLGGQICSIYKLVMKLYKSKQYPEYTDITLEDWEETLRVNFVRDSEDAHDNGSESEKKGQSNDEDDDGVVVEDTEGNEDLGSDAQKRKLQGTDEVDYEDGPEEETHDEKKKSEPTKRYDWAIFVEAKGMHFEIHFRFTGEPHILLTQIVQRTAKKFCLQNFGKVGECKAITCKESGVIYYGKDDRKGDEISAFEKEEIPALQTSGVHFKTFWELEDDLDVRYIYSNNVLAMLNAYGVEAARETIIREVQNLNADFMTHSGGYCLMNRTGSIADSTSLFIKMCFETAAKFIVEAAYHGQVDNLETPSARICIGLPVKMGTGCHDLIQKLEI*

>Glyma.02g181200.4.p sequence-type=predicted peptide transcript=Glyma.02g181200.4 locus=Glyma.02g181200 id=Glyma.02g181200.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MIHRVQELYGSNVAGNLLSALSRLFTTFLQMHGFTCGVDDLMLTEGKDVERMNQLNSCEIIGNSVHREFIRVKNSDNIDSVTLQLNIEKKIRSNGEATLTSDRKMTNKLNSTTSSGILKELLSEGILQPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFCDTLYPSHIY*






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