SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g178600

Feature Type:gene_model
Chromosome:Gm02
Start:32036686
stop:32039154
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g178600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G52950.1AT JGI N/AIEA
K07466KEGG DNA repair and recombination proteins JGI N/AIEA
PTHR23273PantherFam REPLICATION FACTOR A 1, RFA1 JGI N/AIEA
PF02721Pfam Domain of unknown function DUF223 JGI N/AIEA
PF08646Pfam Replication factor-A C terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.02g178600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g30881 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g178600
>Glyma.02g178600.1 sequence-type=CDS polypeptide=Glyma.02g178600.1.p locus=Glyma.02g178600 id=Glyma.02g178600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAAGGATTCCTGACAAGATTAGGTCTATTGATGGATCAAAAGAAACGCTTAAGCTTGCTGTTAGGATCACCGATCTTTGGTTCGTTGGGACTCCTAACAAGTCTGAGCAAGCGGAAATGGTTTTTGTTGATTCAGAGGGTGATCAAATTCATGCTATTTGTAAATCGGACCACCTCAAGTCTTGGAAAGTTGATTTAAAAGAGAATTGCACTTATGTTATGCATAATTTCAAAGTTGTTAAGAATGATGGTCAATTTAGAGTGTGCGAACATGAGTACAAGTTATTTTTTATTGGAGTGACGGTTGTTAGAGAAGCTAATTTGCATGAACTGCCTTTTAAGGAATTTAGATTTGTTGAATTTGCAAATGTTGTTGCTGGCAATTTTGTGTCTGGCCTGTTGATTGATATTATTGGGGTCGTTGATATGGTGGTCTTTCGGTATGTTTCATCGAAAAATACCAGGGTTGTTTTTAGAATGAATGATTTGAGGTTATGTGGTGAAATTTTGTCTTGCACACTTTGGGAGAATTACTGTACTCAGTTCCTATCCTATTTGAATGAACGTGGGGATGATGGGCCGATGGTTATTATATTGACACATGCCAGAATAAAAGATGCACAGGGAAGTTATCCAGCTTCAGTGAGCAATTCCTTCAAGGCGTCAAAACTATTGATTAATGATCCTATATTGGAAATTCAGGAATTTAAAGAGAGGCTTTTAGATTTAGGTGTTGAGGTGAGTCGAGTTTTGCTACCTGGCGATCAAGCAAGCTCACAAGTTTCAGGGGGAAGTCAGCTATCATCAAAGGATTCGTTTCTTTCAAAGGCTGAAGCCAAAACTATTTTAGAAATCAATGCCATTTCTGAGGACGTTGTTTGTGTTACGGTGGGGACTATTAGAAAAATAGTCATGGATAACCATTCATGGTGTTATCCAGCCTGTGCTCAATGTCATAGGAAAACTGACATCCAAACAGGACCATTCACATGTGGATGTGGCAAGGATAATGATCAACCTGTTCTGAGGTATAGAGTTGAAGTCATGGTTACCCAAAACAATGAGAGTAGCAAATTTTTGCTCTGGGACCGTGAATGTGCTGAATTGATTGGTGAAACAGCTGATGATGTGAATAGGGTCAAGATTGAAGATGGTGATCTTGATTTGAATGCTTCCCCTCAAGCACTTGACAAATTCTTGGGTCATGTGCTTGCTTTTAAGGTCAGGATTCAATCAAAATTCAAAAATGCAGTTGTACTAAGATACTCAAAAGACCTGGATTTGATCAATGCTATTCTCGAGATGCTGCCTGATAGTGAGGCATGTTCCAAAATAGATCCTTCCAATGTTGATTGCAATGATGCTGCACATGCTGAATGTCAATCTCTGTCTGTCATAGCTGACCATGATCCGGTTGCGGGATTGCCTTTAACACCCAAAAAGCGGATGTCATCTGATGAAGCCGATGATGAGTTAGGGAGCTCTCAAATTTCGCCAGCCTAA
Predicted protein sequences of Glyma.02g178600
>Glyma.02g178600.1.p sequence-type=predicted peptide transcript=Glyma.02g178600.1 locus=Glyma.02g178600 id=Glyma.02g178600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MARIPDKIRSIDGSKETLKLAVRITDLWFVGTPNKSEQAEMVFVDSEGDQIHAICKSDHLKSWKVDLKENCTYVMHNFKVVKNDGQFRVCEHEYKLFFIGVTVVREANLHELPFKEFRFVEFANVVAGNFVSGLLIDIIGVVDMVVFRYVSSKNTRVVFRMNDLRLCGEILSCTLWENYCTQFLSYLNERGDDGPMVIILTHARIKDAQGSYPASVSNSFKASKLLINDPILEIQEFKERLLDLGVEVSRVLLPGDQASSQVSGGSQLSSKDSFLSKAEAKTILEINAISEDVVCVTVGTIRKIVMDNHSWCYPACAQCHRKTDIQTGPFTCGCGKDNDQPVLRYRVEVMVTQNNESSKFLLWDRECAELIGETADDVNRVKIEDGDLDLNASPQALDKFLGHVLAFKVRIQSKFKNAVVLRYSKDLDLINAILEMLPDSEACSKIDPSNVDCNDAAHAECQSLSVIADHDPVAGLPLTPKKRMSSDEADDELGSSQISPA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo