SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g174800

Feature Type:gene_model
Chromosome:Gm02
Start:29888460
stop:29894810
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g174800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G57800.2AT JGI N/AIEA
GO:0046983GO-mf protein dimerization activity JGI N/AIEA
PTHR12565PantherFam STEROL REGULATORY ELEMENT-BINDING PROTEIN JGI N/AIEA
PTHR12565:SF112PantherFam TRANSCRIPTION FACTOR BHLH48 JGI N/AIEA
PF00010Pfam Helix-loop-helix DNA-binding domain JGI N/AIEA

Gene model name correspondences to Glyma.02g174800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g29518 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g174800
>Glyma.02g174800.1 sequence-type=CDS polypeptide=Glyma.02g174800.1.p locus=Glyma.02g174800 id=Glyma.02g174800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGCAAACCACTCTCGAAGCCATTCAGTTCAACGAGGAAATCCAAGGTCTCATGGCTGCTCCGGCGCCGGAAACCGCCAATTCCTTCACCGCGCTGCTCGAGCTTCCCCCGACGCAGGCCGTCGAACTCTTCCACTCGCCGGAGCGCGCCGGGAAACCGCCGCGCCACAGTCCCAAATCCTATCCGTTGACCTCCTTCGCCGCCTCCGCATCCGCCCCCGCCACCGCCACCGCCACCGCCAACGCCAACCTCACCTTTCCCTCCAACGCCGCGCTGATCGATCGCGCCGCCAGGTTCTCCGTCTTCGCCGGCCAGAGCTCGAACTCGAACTCGCCGGAGGTGAAGCGAGAGCTGCCGGAGACCGATTCCAACCCGAGCTCCACTCACGGCGGCGGCGGCGGAGGCTCCGTCTCCGATCTCGCCGTGGAGAACCAGAATCTGAAAACTGCGAAGAGGAAGGAGCGAGAGAAGAAGGTTAAAGCGTCGTCGAAGAAGAGCAAGAGCGTCGCCGCCGCCGACGAGATTTCCGGCGACGGCGAGAAGCTTCCGTACGTTCACGTTCGAGTTCGTCGAGGTCAAGCCACTGATAGCCATAGCTTAGCAGAAAGGGCTAGGAGAGAGAAGATAAATGCTCGGATGAAGCTTTTACAAGAGCTGGTCCCGGGTTGCAACAAGATATCGGGAACGGCATTGGTTCTGGATAAAATCATCAACCATGTGCAATCTCTACAGAATGAAGTGGAGATATTATCAATGAAACTGGCAGCAGTTAACCCAGTAATTGATTTCAACCTCGACAGCTTACTGGCTACTGAAGGAGTGACTCCAATGGACTGTAACTTCCCTCCGACAGTTGCACCTGTCATGTGGCCAGAAATCCCACAGAACGGAAACAGACAACAATATCAGCAACCATGGCCGTTTGATGCACTCCACCAACCCCTTTGGGGGAGGGAAGAAGACAACACTAATTTCATGACTCCAGAAAACTCACTCTTGAGTTATGACTCATCGGCAAATTCAGTATCTCTGCATTCAAATCAGTTGAAGATGGAGCTCTAA
Predicted protein sequences of Glyma.02g174800
>Glyma.02g174800.1.p sequence-type=predicted peptide transcript=Glyma.02g174800.1 locus=Glyma.02g174800 id=Glyma.02g174800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEQTTLEAIQFNEEIQGLMAAPAPETANSFTALLELPPTQAVELFHSPERAGKPPRHSPKSYPLTSFAASASAPATATATANANLTFPSNAALIDRAARFSVFAGQSSNSNSPEVKRELPETDSNPSSTHGGGGGGSVSDLAVENQNLKTAKRKEREKKVKASSKKSKSVAAADEISGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNEVEILSMKLAAVNPVIDFNLDSLLATEGVTPMDCNFPPTVAPVMWPEIPQNGNRQQYQQPWPFDALHQPLWGREEDNTNFMTPENSLLSYDSSANSVSLHSNQLKMEL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo