SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g171900

Feature Type:gene_model
Chromosome:Gm02
Start:29067831
stop:29088740
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g171900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G42040.1AT JGI N/AIEA
PTHR34122PantherFam EXPRESSED PROTEIN-RELATED JGI N/AIEA
PTHR34122:SF1PantherFam WRC DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF08879Pfam WRC JGI N/AIEA

Gene model name correspondences to Glyma.02g171900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g28962 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g171900
>Glyma.02g171900.1 sequence-type=CDS polypeptide=Glyma.02g171900.1.p locus=Glyma.02g171900 id=Glyma.02g171900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGGATCCGTAAGAGACAAGTGCCTTTCCCTCTCTTGCCGGCGACTTACTCAGATCCCAACCTGATCAACCGGTCACCGGTGATGGTGCAACTCAACGATGCCACCAAAGCTTCTTCTTGCACTCATCATCATGGTTCAACCACCACTGCACCCTCACCCCTCTTGGATTGTCCTCAGCCGTCCGATCAGCCTCTCCCACTGATTGGGAAGCCCACCAACGGCTCTGATGAGTCCTCCGGAGAAGGGCAAAAGAAGCAAGAAGAAGAGTCTTCGGTGAAAGATGGGAGAAGGAAAGAAGAGGGAGAGGGACATAAGGGTAATGGTGCCAGGAGAGGAAGCATCTCATGTTCAGAAAAGCTGGCTGAAACATTTTCATCTCCAACAAGCCCTCCTAAACAAGATGGGAGATGGTGCGAGGGAGATAAAGCTTTTCCACCCAAGAAGCGAAGAGGGGCCTTCGAGAATGCAACCGAAGATATCAACGTCAATGATGATAACAACGATAAGAAGAATTCGAAGACCAAGACGAAGAGAATGAAGAGGAAGATGAACAAGAGTTCGAGGCAAGACGATAGCAATGAAGAAGAGGTAGAGAACCAAGAAGAGGCGGCAACAAAGGAAACGAAACCCGAACAAGCAAACGTTGGTAAGAAGAGGGTAAGGGGTAGTGCACTAATGGAAGGTTCAAGGTGCAGTCGTGTAAACGGAAGAGGATGGAGGTGTTTTCAACAAACCTTGGTGGGTTACTCTCTTTGCGAGCATCACTTAGGGAAAGGAAGGTTGAGAAGCATGACAAGTGTGAGAAACAAGTCCATTGGGACAACAAGTGTTGCACCAAAGAACAATATTGTGCCTCAATCCGAGCATTCATTCGGAAAGCAAACAACAAAGTCTAGTAGTAGTGTCACTGAAGAGTACCCTTTGGGAAATGATGCTGAAAACAATGATGAGAAGAAGCCAGTGATTGTCACAAAGAGGAGGATGAAGCTTGGAATGGTGAAAGCTCGATCCATAAGCAGCTTGCTGGGCCAAACCAACACTGAAATTGTTTCCATAGCCGAGGATAATGATAACAAATAG

>Glyma.02g171900.2 sequence-type=CDS polypeptide=Glyma.02g171900.2.p locus=Glyma.02g171900 id=Glyma.02g171900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGGATCCGTAAGAGACAAGTGCCTTTCCCTCTCTTGCCGGCGACTTACTCAGATCCCAACCTGATCAACCGGTCACCGGTGATGGTGCAACTCAACGATGCCACCAAAGCTTCTTCTTGCACTCATCATCATGGTTCAACCACCACTGCACCCTCACCCCTCTTGGATTGTCCTCAGCCGTCCGATCAGCCTCTCCCACTGATTGGGAAGCCCACCAACGGCTCTGATGAGTCCTCCGGAGAAGGGCAAAAGAAGCAAGAAGAAGAGTCTTCGGTGAAAGATGGGAGAAGGAAAGAAGAGGGAGAGGGACATAAGGGTAATGGTGCCAGGAGAGGAAGCATCTCATGTTCAGAAAAGCTGGCTGAAACATTTTCATCTCCAACAAGCCCTCCTAAACAAGATGGGAGATGGTGCGAGGGAGATAAAGCTTTTCCACCCAAGAAGCGAAGAGGGGCCTTCGAGAATGCAACCGAAGATATCAACGTCAATGATGATAACAACGATAAGAAGAATTCGAAGACCAAGACGAAGAGAATGAAGAGGAAGATGAACAAGAGTTCGAGGCAAGACGATAGCAATGAAGAAGAGGTAGAGAACCAAGAAGAGGCGGCAACAAAGGAAACGAAACCCGAACAAGCAAACGTTGGTAAGAAGAGGGTAAGGGGTAGTGCACTAATGGAAGGTTCAAGGTGCAGTCGTGTAAACGGAAGAGGATGGAGGTGTTTTCAACAAACCTTGGTGGGTTACTCTCTTTGCGAGCATCACTTAGGGAAAGGAAGGTTGAGAAGCATGACAAGTGTGAGAAACAAGTCCATTGGGACAACAAGTGTTGCACCAAAGAACAATATTGTGCCTCAATCCGAGCATTCATTCGGAAAGCAAACAACAAAGTCTAGTAGTAGTGTCACTGAAGAGTACCCTTTGGGAAATGATGCTGAAAACAATGATGAGAAGAAGCCAGTGATTGTCACAAAGAGGAGGATGAAGCTTGGAATGGTGAAAGCTCGATCCATAAGCAGCTTGCTGGGCCAAACCAACACTGAAATTGTTTCCATAGCCGAGGATAATGATAACAAATAG
Predicted protein sequences of Glyma.02g171900
>Glyma.02g171900.1.p sequence-type=predicted peptide transcript=Glyma.02g171900.1 locus=Glyma.02g171900 id=Glyma.02g171900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRIRKRQVPFPLLPATYSDPNLINRSPVMVQLNDATKASSCTHHHGSTTTAPSPLLDCPQPSDQPLPLIGKPTNGSDESSGEGQKKQEEESSVKDGRRKEEGEGHKGNGARRGSISCSEKLAETFSSPTSPPKQDGRWCEGDKAFPPKKRRGAFENATEDINVNDDNNDKKNSKTKTKRMKRKMNKSSRQDDSNEEEVENQEEAATKETKPEQANVGKKRVRGSALMEGSRCSRVNGRGWRCFQQTLVGYSLCEHHLGKGRLRSMTSVRNKSIGTTSVAPKNNIVPQSEHSFGKQTTKSSSSVTEEYPLGNDAENNDEKKPVIVTKRRMKLGMVKARSISSLLGQTNTEIVSIAEDNDNK*

>Glyma.02g171900.2.p sequence-type=predicted peptide transcript=Glyma.02g171900.2 locus=Glyma.02g171900 id=Glyma.02g171900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRIRKRQVPFPLLPATYSDPNLINRSPVMVQLNDATKASSCTHHHGSTTTAPSPLLDCPQPSDQPLPLIGKPTNGSDESSGEGQKKQEEESSVKDGRRKEEGEGHKGNGARRGSISCSEKLAETFSSPTSPPKQDGRWCEGDKAFPPKKRRGAFENATEDINVNDDNNDKKNSKTKTKRMKRKMNKSSRQDDSNEEEVENQEEAATKETKPEQANVGKKRVRGSALMEGSRCSRVNGRGWRCFQQTLVGYSLCEHHLGKGRLRSMTSVRNKSIGTTSVAPKNNIVPQSEHSFGKQTTKSSSSVTEEYPLGNDAENNDEKKPVIVTKRRMKLGMVKARSISSLLGQTNTEIVSIAEDNDNK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo