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Report for Sequence Feature Glyma.02g170100

Feature Type:gene_model
Chromosome:Gm02
Start:26355835
stop:26357491
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.02g170100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G04040.1AT Phosphofructokinase family protein JGI N/AIEA
GO:0006096GO-bp glycolytic process EnsemblGenomesN/AIEA
GO:0061615GO-bp glycolytic process through fructose-6-phosphate EnsemblGenomesN/AIEA
GO:0003872GO-mf 6-phosphofructokinase activity EnsemblGenomesN/AIEA
PTHR13697Panther PHOSPHOFRUCTOKINASE JGI N/AIEA
PWY-1042SoyCyc9 glycolysis IV (plant cytosol) Plant Metabolic Network ISS
PWY-5464SoyCyc9 superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle Plant Metabolic Network ISS
GN7V-42592SoyCyc9-rxn diphosphate-fructose-6-phosphate 1-phosphotransferase Plant Metabolic Network ISS

Expression Patterns of Glyma.02g170100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.02g170100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g26530 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g170100
>Glyma.02g170100.1 sequence-type=CDS polypeptide=Glyma.02g170100.1.p locus=Glyma.02g170100 ID=Glyma.02g170100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACCGAAGGAGATTTTGCAATCAACGGTGGTTTCCCCGGCGCCAGAGTCACTCCTCCTTCCGTCACCGGTCGCTTCGCCGCCGTCTACAGCGAGGTCCAAAACAGTTGCATTGACCACGAACTCCCTCTCCCCTCCGTTCTCAAAAGCCCTTTCATCATTGTCGATAGTCCCCAAAGCTCTGCCGCCGGCAACCCTGAGGAGATCGCGAAGCCGTTCCCGAAACTGTTCGGGCAACCGTCCGCGGCTTTGGTGTCAAGTGATTCCCATGCGCCGCATGCAAATCGAAAGCTGAAGATTGGCGTGGTTCTGTCCGGTGTCCAGCCTCCCGACGGTCACAATGTTATTTTTGGAATCTTCGATTACCTACAAGACCTTGCAGAAGGAAGCACATTGTATGGTTTCAGGGGTGGTCCAGCTGGCATCATGAAGTGCAAATACATTGAACTTACCTCAGATTATATTTATCCTTCCAGAAATCAGACTATTGTGGCTAGGGAAACCCATTTCATCCCATTTCATCTTGTTATTAATACCATAGTTAGAACTTAG
Predicted protein sequences of Glyma.02g170100
>Glyma.02g170100.1.p sequence-type=predicted peptide transcript=Glyma.02g170100.1 locus=Glyma.02g170100 ID=Glyma.02g170100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTEGDFAINGGFPGARVTPPSVTGRFAAVYSEVQNSCIDHELPLPSVLKSPFIIVDSPQSSAAGNPEEIAKPFPKLFGQPSAALVSSDSHAPHANRKLKIGVVLSGVQPPDGHNVIFGIFDYLQDLAEGSTLYGFRGGPAGIMKCKYIELTSDYIYPSRNQTIVARETHFIPFHLVINTIVRT*






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