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Report for Sequence Feature Glyma.02g169300

Feature Type:gene_model
Chromosome:Gm02
Start:26147495
stop:26148132
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.02g169300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G24960.1AT HVA22 homologue D JGI N/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
PTHR12300Panther HVA22-LIKE PROTEINS JGI N/AIEA
PTHR12300:SF11Panther JGI N/AIEA
PF03134PFAM TB2/DP1, HVA22 family JGI N/AIEA

Expression Patterns of Glyma.02g169300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.02g169300 not represented in the dataset
Glyma.02g169300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.02g169300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g26643 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g169300
>Glyma.02g169300.1 sequence-type=CDS polypeptide=Glyma.02g169300.1.p locus=Glyma.02g169300 ID=Glyma.02g169300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATTCTTCAACCTATCTTAGAGTGGATACCAATTTGGTACAATGTGAAGCTATTGACAGTGGCATGGCTGGTGTTGCCACAGTTCGCAGGAGCTGCGTACTTATATGAAAGGTTTAGACAACATCTCTATGACAACCACCAGCAACAAAGAAAAAAGTCTCCCAATAACGGTGGCAAGGCCAAGAAGTTCTTCGAATTCGTCACGCCCAAGAAAAGGGATCAAGAGGCGTATTGA
Predicted protein sequences of Glyma.02g169300
>Glyma.02g169300.1.p sequence-type=predicted peptide transcript=Glyma.02g169300.1 locus=Glyma.02g169300 ID=Glyma.02g169300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MILQPILEWIPIWYNVKLLTVAWLVLPQFAGAAYLYERFRQHLYDNHQQQRKKSPNNGGKAKKFFEFVTPKKRDQEAY*






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