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Report for Sequence Feature Glyma.02g169100

Feature Type:gene_model
Chromosome:Gm02
Start:26110905
stop:26115481
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.02g169100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G11980.1AT Jojoba acyl CoA reductase-related male sterility protein JGI N/AIEA
GO:0006629GO-bp lipid metabolic process EnsemblGenomesN/AIEA
GO:0010345GO-bp suberin biosynthetic process EnsemblGenomesN/AIEA
GO:0035336GO-bp long-chain fatty-acyl-CoA metabolic process EnsemblGenomesN/AIEA
GO:0044237GO-bp cellular metabolic process JGI N/AIEA
GO:0045226GO-bp extracellular polysaccharide biosynthetic process JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0043231GO-cc intracellular membrane-bounded organelle EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0008831GO-mf dTDP-4-dehydrorhamnose reductase activity JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
GO:0050662GO-mf coenzyme binding JGI N/AIEA
GO:0080019GO-mf fatty-acyl-CoA reductase (alcohol-forming) activity EnsemblGenomesN/AIEA
GO:0080019GO-mf fatty-acyl-CoA reductase (alcohol-forming) activity JGI N/AIEA
GO:0102965GO-mf alcohol-forming fatty acyl-CoA reductase activity EnsemblGenomesN/AIEA
KOG1221 KOG Acyl-CoA reductase JGI N/AIEA
PTHR11011Panther MALE STERILITY PROTEIN 2-RELATED JGI N/AIEA
PTHR11011:SF1Panther JGI N/AIEA
PF03015PFAM Male sterility protein JGI N/AIEA
PF07993PFAM Male sterility protein JGI N/AIEA
GN7V-60693SoyCyc9-rxn Hexadecanal dehydrogenase (acylating) Plant Metabolic Network ISS

Expression Patterns of Glyma.02g169100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.02g169100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g26670 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g169100
>Glyma.02g169100.1 sequence-type=CDS polypeptide=Glyma.02g169100.1.p locus=Glyma.02g169100 ID=Glyma.02g169100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGGTCTTGTCCATAGTGCCACAAAACAATGAGCGGTGCCCTTCAAGGAGGAAGGCATGTGTTGTGTATTGCCAAGGGGGTGGGAATGTAATTAAGTCCTCCTCAGGCTTGTCTTCTGTGTTGACAGAAAGATCAGCATTGGTTGGCACAGATCATGCAGCTGCAGTTCTAATGGATGCAGGAAGCTTGGTCTTGTCACAAAATGGGAAAAGCCAGGCAGAGATTTTGGTGAAGGATTTGGTGCCTTATGATGGACCAACAACATTGATAGGGGTGGAAGATGGAATAGGCATTGTCAAGTTTCTTGGAGGGAAAAAGTTTTTCATTACTGGGGCAACTGGGTTTCTAGCCAAAGTTTTTATTGAGAAGATTCTAAGGACAGAGCCAGATGTGGGGAAAATGTACCTTTTGATCAAGGCAAAGAATAAGCAAGCTGCAATGGAGAGATTGCAAAACGAAATCATAAACACAGAACTTTTCAGATGCCTTCAAGAAATCCATGGAAAATCATACCAAGCCTTTATGTTGAGCAAGCTAGTTCCTGTTGTAGGCAATATTTGTGAACATAATCTTGGACTAGATGAGGGTATATCTGATGTTATAGCAGAGGAGGTAGATGTCATTGTAAATTCTGCAGCTAATACCACATTTGATGAAAGATATGACACTGCTATCAACATAAACACCATAGGGCCATGCCGCCTTATGAACATTGCCAAAAAGTGCAAGAAGCTCAAGCTCTTTCTGCATGTTTCAACAGCATATGTCAATGGACAAAGGCAAGGTAGGATCATGGAGAGACCATTTAGCATTGGAGAGTGCATAGCAAGAGAAAAATATATATCTGAAGTTTCCCCAAAATACCTTCCCACATTGGACATTGAAGGAGAAATAAATCTGGTTTCAAATTACAAAGGGGACATTGAAGACAACTTACTAGCTCAGAAAATGAAGGAGATTGGTCTAGAGAGGGCCAGAAGATATGGGTGGCAGGATACATATGTGTTCACAAAGGCTATGGGAGAAATGATGATTGACAAATTGAGAGGGGATATTCCAGTTGTTGTAATGCGACCAAGTGTTATTGAGAGCACTTTCAGTGAACCATTTCCTGGATGGATGGAAGGAAATAGGATGATGGATCCAATAGTTCTCTGCTATGGGAAAGGGCAGCTAACAGGTTTTCTGGTAGATCCAAATGGAGTACTAGATGTGGTCCCAGCTGACATGGTTGTTAATGCAACCTTAGCTGCAATGGCAAGGCATGGAGTGAGCCAAAAGCCAGATATCAATGTGTACCAAATTGCTTCATCTGTGGTGAACCCTCTAGTTTTCCAAGACCTGGCAAGGCTTCTCTATGAACATTACAGCTCCTCACCATGCATTGACTCAAAGGGTAGGCCAATTCAAGTTCCACTGATGAAGTTGTTTAGCTCCACAGAAGAATTCTCTGGCCACCTGTGGAGAGATGCTATTCAGAAAAGAGGCCTCACAGCTGTGGCCTCCTCAAAGGGGAAGATGTCTCAAAAACTTGAAAACATGTGCAGAAAATCAGTGGAGCAAGCAAAGTACTTGGCCAACATTTATGAACCATACACATTTTACGGTGGAAGGTTTGATAACAGTAACACACAAAGATTAATGGAAAGCATGTCTGAAAAAGAAAAAAGGGAGTTTGGCTTTGATGTAAAGAGCATTGATTGGAATGACTACATCACCAATGTCCATATACCTGGCCTAAGGAGACATGTCATGAAGGGACGAGGAATGGGGAGTCAGTGA
Predicted protein sequences of Glyma.02g169100
>Glyma.02g169100.1.p sequence-type=predicted peptide transcript=Glyma.02g169100.1 locus=Glyma.02g169100 ID=Glyma.02g169100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGVLSIVPQNNERCPSRRKACVVYCQGGGNVIKSSSGLSSVLTERSALVGTDHAAAVLMDAGSLVLSQNGKSQAEILVKDLVPYDGPTTLIGVEDGIGIVKFLGGKKFFITGATGFLAKVFIEKILRTEPDVGKMYLLIKAKNKQAAMERLQNEIINTELFRCLQEIHGKSYQAFMLSKLVPVVGNICEHNLGLDEGISDVIAEEVDVIVNSAANTTFDERYDTAININTIGPCRLMNIAKKCKKLKLFLHVSTAYVNGQRQGRIMERPFSIGECIAREKYISEVSPKYLPTLDIEGEINLVSNYKGDIEDNLLAQKMKEIGLERARRYGWQDTYVFTKAMGEMMIDKLRGDIPVVVMRPSVIESTFSEPFPGWMEGNRMMDPIVLCYGKGQLTGFLVDPNGVLDVVPADMVVNATLAAMARHGVSQKPDINVYQIASSVVNPLVFQDLARLLYEHYSSSPCIDSKGRPIQVPLMKLFSSTEEFSGHLWRDAIQKRGLTAVASSKGKMSQKLENMCRKSVEQAKYLANIYEPYTFYGGRFDNSNTQRLMESMSEKEKREFGFDVKSIDWNDYITNVHIPGLRRHVMKGRGMGSQ*






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