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Report for Sequence Feature Glyma.02g152300

Feature Type:gene_model
Chromosome:Gm02
Start:16063149
stop:16067070
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g152300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G03120.1AT JGI N/AIEA
GO:0000387GO-bp spliceosomal snRNP assembly JGI N/AIEA
GO:0000398GO-bp mRNA splicing, via spliceosome JGI N/AIEA
GO:0005685GO-cc U1 snRNP JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
K11095KEGG Spliceosome JGI N/AIEA
PTHR31148PantherFam U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C JGI N/AIEA
PTHR31148:SF1PantherFam U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C JGI N/AIEA
PF06220Pfam U1 zinc finger JGI N/AIEA

Gene model name correspondences to Glyma.02g152300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g17120 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g152300
>Glyma.02g152300.1 sequence-type=CDS polypeptide=Glyma.02g152300.1.p locus=Glyma.02g152300 id=Glyma.02g152300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTCGGTACTACTGTGACTACTGCGACACCTATTTGACCCACGATTCTCCATCTGTTAGAAAGCAGCACAATGCAGGTTACAAACACAAGGCAAATGTGAGGACCTACTACCAGCAATTTGAAGAACAACAAACACAAAGTTTAATTGATCAAAGGATCAAAGAACATCTTGGGCAAGCTGCAGCGTTTCAGCAGGTTGGTGTGGCTTATAATCATCTAATGGTTCAGAGGCCTAACCTTCCTCCTGTATTGCCACCACCAAGATTGCCTATTCCTGGAAATGCACAAATACCTGGAAGCCAACCACTAATGCCAGGGATGAGACCACCTGTCTTTCCTAGACCTCCTGGTGCACCAGGATATGTTTCTGCACCTACCATGCCTCCAATGTTACCTCCACCTGGTGCTCCCCAGGCACCAGGTCAACTAAATACCATACCAAGGCCCCCTTCATTAGCTCCCCCTCCAGCAGTTCCTGGAAGCACTGCTGCTCCAGCTTCCAATGGTGCTCCCTCTATGGTATCATCAGCAATGTATCAAGCCAATCCTCCGGCACCATCATCTGGAAGTTATGATAATTACAATGCCAGTGCTCAAGCACCTGAGGGTAATCACTGA
Predicted protein sequences of Glyma.02g152300
>Glyma.02g152300.1.p sequence-type=predicted peptide transcript=Glyma.02g152300.1 locus=Glyma.02g152300 id=Glyma.02g152300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQIPGSQPLMPGMRPPVFPRPPGAPGYVSAPTMPPMLPPPGAPQAPGQLNTIPRPPSLAPPPAVPGSTAAPASNGAPSMVSSAMYQANPPAPSSGSYDNYNASAQAPEGNH*






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