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Report for Sequence Feature Glyma.02g125600

Feature Type:gene_model
Chromosome:Gm02
Start:12584740
stop:12587472
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.02g125600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G14960.1AT Auxin-responsive GH3 family protein JGI N/AIEA
PF03321PFAM GH3 auxin-responsive promoter JGI N/AIEA
PWY-6219SoyCyc9 indole-3-acetate inactivation VIII Plant Metabolic Network ISS
GN7V-44607SoyCyc9-rxn Enzyme name not determined Plant Metabolic Network ISS

Proteins Associated with Glyma.02g125600
LocusGene SymbolProtein Name
GH3.1 auxin synthesis-related gene

Expression Patterns of Glyma.02g125600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.02g125600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g13910 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g125600
>Glyma.02g125600.1 sequence-type=CDS polypeptide=Glyma.02g125600.1.p locus=Glyma.02g125600 ID=Glyma.02g125600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTGTGGACTCTGCGATTTCGTCCCCATTGGGTCCCCCGGCCTGTGAGAAGGACGCAAAGGCGTTGCGGTTCATCGAAGAAATGACTCGCAACGCCGACGCCGTCCAGGAGAGAGTCCTGGAGGAGATTCTCACACGCAACGCCCAGACAGAGTACCTTAAACGCTTCGAACTCGACGGCGCCGCCGACCGCCAAGCCTTCAAGTCCAAGATTCCCGTCATAACCTACGAGGACGTCCAGCCGGAGATTCAGCGCATCGCCAATGGCGACCGCTCCCCCATCCTGTCCGCTCACCCCATCTCCGAGTTTCTCACCAGTTCTGGGACTTCAGCTGGGGAAAGAAAACTAATGCCCACAATCAAGGAAGAGCTGGATCGTCGCCAACTTCTATACAGCCTCCTCATGCCAGTTATGAACCTTTATGTGCCCGGCTTGGACAAGGGAAAGGGCCTATACTTTTTGTTCGTGAAGTCCGAAACAAGGACCCCGGGTGGGTTACTGGCCCGTCCGGTTCTCACAAGCTACTACAAAAGTGACCATTTCAAGACCCGACCCTATGACCCGTACAATGTTTACACAAGTCCAAATGAAGCCATTCTTTGCTCGGACTCATTCCAAAGCATGTATACTCAAATGCTATGTGGCCTCATTGAGCGCCACCATGTCCTCCGCCTCGGCGCCGTCTTCGCCTCCGGGCTCCTCCGTGCAATCCGGTTCCTCCAACTCAATTGGCCCGAACTTGCCCATGATATCCAAACCGGAACCTTAAATTCTCGGATCACCGACCCGGCAATTAGGAGTTACATGGACAAGGTGCTAAAATCCGACCCGGAATTGGCCCAATTTGTGACACAACAATGTTCCAAGGACAATTGGGAAGGAATCATCACAAGGATTTGGCCCAACACAAAATACTTGGACGTCATCGTAACGGGTGCCATGGCCCAATACATTCCCACTCTTAACTACTACAGCGGAGGAGGGTTGCCACTTGCATGCACCATGTACGCTTCATCAGAGTGTTACTTTGGACTCAACCTTAATCCGATGTGCAAGCCCTCTGAGGTTTCATACACCATTATGCCAAACATGGCATATTTCGAATTCCTTCCCCACGATCCTAAGCCTGGCTCCACCAGTTCAAAACTAGTGGAGTTGGCGGACGTTGAAGTGGGGAAGGAATACGAACTGGTGATCACAACCTATGCGGGACTCTATCGGTACCGTGTGGGCGACATCCTCCGAGTCACCGGTTTCCACAACTCGGCACCACAATTCCACTTCGTGCGCAGGAAGAACGTGTTGCTGAGCATTGACTCAGACAAAACAGACGAGTCAGAGTTGCAAAAGGGGATTGAGAATGCCTCAAAGCTTTTATCAGAGTTCAATACAAGCGTTGTGGAGTACACGAGTTATGCAGACACAACAACGATTCCGGGTCACTACGTGATTTATTGGGAATTGTTGACCAAGGACTCGACGAACTCACCCAGTCACGAGGTGTTGAATCGGTGTTGTTTGGAGATGGAGGAGTGCTTGAACTCGGTGTATAGACAATGTCGTGTTGCTGATCATTCCATTGGCCCATTGGAAATTCGTGTTGTGAGGAATGGGACCTTTGAGGAGCTTATGGATTATGCAATCTCAAGAGGTGCGTCCATAAATCAATATAAGGTGCCAAGATGTGTGAATTTCACACCCATAATGGAGTTATTGGACTCTAGGGTTGTGTCTGTGCATTTTAGCCAGGAATTACCACATTGGACCCCTGAAAGGAGGAGGTGA
Predicted protein sequences of Glyma.02g125600
>Glyma.02g125600.1.p sequence-type=predicted peptide transcript=Glyma.02g125600.1 locus=Glyma.02g125600 ID=Glyma.02g125600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAVDSAISSPLGPPACEKDAKALRFIEEMTRNADAVQERVLEEILTRNAQTEYLKRFELDGAADRQAFKSKIPVITYEDVQPEIQRIANGDRSPILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPYNVYTSPNEAILCSDSFQSMYTQMLCGLIERHHVLRLGAVFASGLLRAIRFLQLNWPELAHDIQTGTLNSRITDPAIRSYMDKVLKSDPELAQFVTQQCSKDNWEGIITRIWPNTKYLDVIVTGAMAQYIPTLNYYSGGGLPLACTMYASSECYFGLNLNPMCKPSEVSYTIMPNMAYFEFLPHDPKPGSTSSKLVELADVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDESELQKGIENASKLLSEFNTSVVEYTSYADTTTIPGHYVIYWELLTKDSTNSPSHEVLNRCCLEMEECLNSVYRQCRVADHSIGPLEIRVVRNGTFEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVVSVHFSQELPHWTPERRR*






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