Glyma.02g120200

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Report for Sequence Feature Glyma.02g120200

Feature Type:	gene_model
Chromosome:	Gm02
Start:	11850522
stop:	11856212
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.02g120200

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G13700.1	AT	6-phosphogluconolactonase 1	JGI	N/A	IEA
GO:0005975	GO-bp	carbohydrate metabolic process	EnsemblGenomes	N/A	IEA
GO:0005975	GO-bp	carbohydrate metabolic process	JGI	N/A	IEA
GO:0006098	GO-bp	pentose-phosphate shunt	EnsemblGenomes	N/A	IEA
GO:0009051	GO-bp	pentose-phosphate shunt, oxidative branch	EnsemblGenomes	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0017057	GO-mf	6-phosphogluconolactonase activity	EnsemblGenomes	N/A	IEA
KOG3147	KOG	6-phosphogluconolactonase - like protein	JGI	N/A	IEA
PTHR11054	Panther	6-PHOSPHOGLUCONOLACTONASE	JGI	N/A	IEA
PF01182	PFAM	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	JGI	N/A	IEA
OXIDATIVEPENT-PWY	SoyCyc9	pentose phosphate pathway (oxidative branch) I	Plant Metabolic Network		ISS
PENTOSE-P-PWY	SoyCyc9	pentose phosphate pathway	Plant Metabolic Network		ISS
GN7V-67724	SoyCyc9-rxn	6-phosphogluconolactonase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.02g120200

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.02g120200 not represented in the dataset	Glyma.02g120200 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.02g120200

Paralog	Evidence	Comments
Glyma.01g062000	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.02g120200 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma02g13250	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.02g120200

Limit To All Plant Sequences

>Glyma.02g120200.2 sequence-type=transcript locus=Glyma.02g120200 ID=Glyma.02g120200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTTCTAAAAGAAATAAATACTGGCGGAAAATTAAAAATAAAATAAAATTATGATCTCTTTTTAAATACAGACGCGTCCAAAATGATCCGGTGCAGTGCAGCCAAGAAAAAATTAACTGTACAAGAGCTTTTGGAGTTTGGAGTCTCTTGAACCATGGCTAAGAATAGAGGAGAGTTGAGGATTCATGAGAGTGTGGATGAGCTAAGGACTGATTTGGCAGACTATGTTGCTGAGTTATCAGAGGCATCTGTGAAAGAGCGAGGAGTCTTTGCCATTGCTTTATCTGGTGGTTCTCTCATTGGCTTAATGGGAAAACTCTGTGAAGCTCCTTATAACAAGACAGTGGACTGGTCCAAGTGGTATATCTTCTGGGCTGACGAGCACGTTGTGGCGAAAAACCATGCCGATAGCAATTATAAGCTTGCTAAAGATGGCCTTTTGTCCAAGGTGCCTATTGTCCCTAGTCATGTGCATTCGATTAACGATTCCGTGTCAGCAGAAGAAGCTGCCGATGATTACGAGTTTGTCATTCGACAGCTGGTGAAAACCCGTGTTGTCAGCGTGTCTGAGATTAGTGATTGTCCCAAGTTTGACCTCATTCTGCTTGGATTGGGTCCAGACGGCCACATTGCCTCTTTGTTTCCTAACCACTCAGCACTCAATGAAAGGGAAGAATGGGTAACTTTCATTACTGACTTCCCCAAACCCCCACCTGAGAGAATCACATTCACCTTGCCTGTCATCAATTCTGCATCCAATGTTGCAGTAGTTGTCACCGGTGAAAGCAAAGCGGAATCCGTACACTTGGCAATAGGCGATGTTGGACCTGATGGCCCCTTAATACCGGCGAGAATGGTCCAACCAGCTATGGGGAAGTTGGTGTGGTTTTTGGATAAACTGGCTGCCTCAAAACTTGAAGATTCCAATTTAAACAAGTAGGACTTGTTGTAAGTTTGTATGTAGTGTTAAGGGATTTCACAAGTGTTGACCATCCTTAGAATCCTGCCTATTTCTTTTCTCTTGGATAGAAAGtctttgttttttttttttttttttttccatttcttgctttctCCTAGGAGGTTGTTTGGAGAAATTGTGGTATAGTTTTTGTAACCGGCCAATAAAAGTTGTGGAGAGCATCATTCCAAGTTCCAACACCCTTGTCTCCTTCTAATTCTTAATTGGGTTATTGGCTATGATGATGGTCTCACCTGTTTGCAATTTAGAAAGTGAAATCAGGTTCATGTAATTCCAAGAGTTCACTTTCCCACACCCTCCCGTTTTCTTTTTTTATCTATTTTGTTTCAATTTCAATATATCTATTCTCTACTTGATGATGG

>Glyma.02g120200.3 sequence-type=transcript locus=Glyma.02g120200 ID=Glyma.02g120200.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
TGATGTTGCTTATGCATCTATCAATTCTCATTGGTTATATATATTTTTTTTTGTGTCAAAAAAATTATATTTGTATTTTGTAATAATATAAGAAAAATTTTATGGTTGAATTCCTTTAGAACCTTATACAATCCAATTTCTCACACGTAatatatatatatatatatatatatatGCCCACACCCATCGTCCACATTCGTCAGCTTCTTCTGTGTGCCACCCCCTCTTTAATTTTTTTTTTCTTTAGCTTTTGGAGTTTGGAGTCTCTTGAACCATGGCTAAGAATAGAGGAGAGTTGAGGATTCATGAGAGTGTGGATGAGCTAAGGACTGATTTGGCAGACTATGTTGCTGAGTTATCAGAGGCATCTGTGAAAGAGCGAGGAGTCTTTGCCATTGCTTTATCTGGTGGTTCTCTCATTGGCTTAATGGGAAAACTCTGTGAAGCTCCTTATAACAAGACAGTGGACTGGTCCAAGTGGTATATCTTCTGGGCTGACGAGCACGTTGTGGCGAAAAACCATGCCGATAGCAATTATAAGCTTGCTAAAGATGGCCTTTTGTCCAAGGTGCCTATTGTCCCTAGTCATGTGCATTCGATTAACGATTCCGTGTCAGCAGAAGAAGCTGCCGATGATTACGAGTTTGTCATTCGACAGCTGGTGAAAACCCGTGTTGTCAGCGTGTCTGAGATTAGTGATTGTCCCAAGTTTGACCTCATTCTGCTTGGATTGGGTCCAGACGGCCACATTGCCTCTTTGTTTCCTAACCACTCAGCACTCAATGAAAGGGAAGAATGGGTAACTTTCATTACTGACTTCCCCAAACCCCCACCTGAGAGAATCACATTCACCTTGCCTGTCATCAATTCTGCATCCAATGTTGCAGTAGTTGTCACCGGTGAAAGCAAAGCGGAATCCGTACACTTGGCAATAGGCGATGTTGGACCTGATGGCCCCTTAATACCGGCGAGAATGGTCCAACCAGCTATGGGGAAGTTGGTGTGGTTTTTGGATAAACTGGCTGCCTCAAAACTTGAAGATTCCAATTTAAACAAGTAGGACTTGTTGTAAGTTTGTATGTAGTGTTAAGGGATTTCACAAGTGTTGACCATCCTTAGAATCCTGCCTATTTCTTTTCTCTTGGATAGAAAGtctttgttttttttttttttttttttccatttcttgctttctCCTAGGAGGTTGTTTGGAGAAATTGTGGTATAGTTTTTGTAACCGGCCAATAAAAGTTGTGGAGAGCATCATTCCAAGTTCCAACACCCTTGTCTCCTTCTAATTCTTAATTGGGTTATTGGCTATGATGATGGTCTCACCTGTTTGCAATTTAGAAAGTGAAATCAGGTTCATGTAATTCCAAGAGTTCACTTTCCCACACCCTCCCGTTTTCTTTTTTTATCTATTTTGTTTCAATTTCAATATATCTATTCTCTACTTGATGATGG

>Glyma.02g120200.4 sequence-type=transcript locus=Glyma.02g120200 ID=Glyma.02g120200.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
TCTACTGTTGTGAAACGTGTTGATTCTTTGTGTGATGCAGTTTCCAAGCTTTTGGAGTTTGGAGTCTCTTGAACCATGGCTAAGAATAGAGGAGAGTTGAGGATTCATGAGAGTGTGGATGAGCTAAGGACTGATTTGGCAGACTATGTTGCTGAGTTATCAGAGGCATCTGTGAAAGAGCGAGGAGTCTTTGCCATTGCTTTATCTGGTGGTTCTCTCATTGGCTTAATGGGAAAACTCTGTGAAGCTCCTTATAACAAGACAGTGGACTGGTCCAAGTGGTATATCTTCTGGGCTGACGAGCACGTTGTGGCGAAAAACCATGCCGATAGCAATTATAAGCTTGCTAAAGATGGCCTTTTGTCCAAGGTGCCTATTGTCCCTAGTCATGTGCATTCGATTAACGATTCCGTGTCAGCAGAAGAAGCTGCCGATGATTACGAGTTTGTCATTCGACAGCTGGTGAAAACCCGTGTTGTCAGCGTGTCTGAGATTAGTGATTGTCCCAAGTTTGACCTCATTCTGCTTGGATTGGGTCCAGACGGCCACATTGCCTCTTTGTTTCCTAACCACTCAGCACTCAATGAAAGGGAAGAATGGGTAACTTTCATTACTGACTTCCCCAAACCCCCACCTGAGAGAATCACATTCACCTTGCCTGTCATCAATTCTGCATCCAATGTTGCAGTAGTTGTCACCGGTGAAAGCAAAGCGGAATCCGTACACTTGGCAATAGGCGATGTTGGACCTGATGGCCCCTTAATACCGGCGAGAATGGTCCAACCAGCTATGGGGAAGTTGGTGTGGTTTTTGGATAAACTGGCTGCCTCAAAACTTGAAGATTCCAATTTAAACAAGTAGGACTTGTTGTAAGTTTGTATGTAGTGTTAAGGGATTTCACAAGTGTTGACCATCCTTAGAATCCTGCCTATTTCTTTTCTCTTGGATAGAAAGtctttgttttttttttttttttttttccatttcttgctttctCCTAGGAGGTTGTTTGGAGAAATTGTGGTATAGTTTTTGTAACCGGCCAATAAAAGTTGTGGAGAGCATCATTCCAAGTTCCAACACCCTTGTCTCCTTCTAATTCTTAATTGGGTTATTGGCTATGATGATGGTCTCACCTGTTTGCAATTTAGAAAGTGAAATCAGGTTCATGTAATTCCAAGAGTTCACTTTCCCACACCCTCCCGTTTTCTTTTTTTATCTATTTTGTTTCAATTTCAATATATCTATTCTCTACTTGATGATGG

Coding sequences of Glyma.02g120200

Limit To All Plant Sequences

>Glyma.02g120200.1 sequence-type=CDS polypeptide=Glyma.02g120200.1.p locus=Glyma.02g120200 ID=Glyma.02g120200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTAAGAATAGAGGAGAGTTGAGGATTCATGAGAGTGTGGATGAGCTAAGGACTGATTTGGCAGACTATGTTGCTGAGTTATCAGAGGCATCTGTGAAAGAGCGAGGAGTCTTTGCCATTGCTTTATCTGGTGGTTCTCTCATTGGCTTAATGGGAAAACTCTGTGAAGCTCCTTATAACAAGACAGTGGACTGGTCCAAGTGGTATATCTTCTGGGCTGACGAGCACGTTGTGGCGAAAAACCATGCCGATAGCAATTATAAGCTTGCTAAAGATGGCCTTTTGTCCAAGGTGCCTATTGTCCCTAGTCATGTGCATTCGATTAACGATTCCGTGTCAGCAGAAGAAGCTGCCGATGATTACGAGTTTGTCATTCGACAGCTGGTGAAAACCCGTGTTGTCAGCGTGTCTGAGATTAGTGATTGTCCCAAGTTTGACCTCATTCTGCTTGGATTGGGTCCAGACGGCCACATTGCCTCTTTGTTTCCTAACCACTCAGCACTCAATGAAAGGGAAGAATGGGTAACTTTCATTACTGACTTCCCCAAACCCCCACCTGAGAGAATCACATTCACCTTGCCTGTCATCAATTCTGCATCCAATGTTGCAGTAGTTGTCACCGGTGAAAGCAAAGCGGAATCCGTACACTTGGCAATAGGCGATGTTGGACCTGATGGCCCCTTAATACCGGCGAGAATGGTCCAACCAGCTATGGGGAAGTTGGTGTGGTTTTTGGATAAACTGGCTGCCTCAAAACTTGAAGATTCCAATTTAAACAAGTAG

>Glyma.02g120200.2 sequence-type=CDS polypeptide=Glyma.02g120200.2.p locus=Glyma.02g120200 ID=Glyma.02g120200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTAAGAATAGAGGAGAGTTGAGGATTCATGAGAGTGTGGATGAGCTAAGGACTGATTTGGCAGACTATGTTGCTGAGTTATCAGAGGCATCTGTGAAAGAGCGAGGAGTCTTTGCCATTGCTTTATCTGGTGGTTCTCTCATTGGCTTAATGGGAAAACTCTGTGAAGCTCCTTATAACAAGACAGTGGACTGGTCCAAGTGGTATATCTTCTGGGCTGACGAGCACGTTGTGGCGAAAAACCATGCCGATAGCAATTATAAGCTTGCTAAAGATGGCCTTTTGTCCAAGGTGCCTATTGTCCCTAGTCATGTGCATTCGATTAACGATTCCGTGTCAGCAGAAGAAGCTGCCGATGATTACGAGTTTGTCATTCGACAGCTGGTGAAAACCCGTGTTGTCAGCGTGTCTGAGATTAGTGATTGTCCCAAGTTTGACCTCATTCTGCTTGGATTGGGTCCAGACGGCCACATTGCCTCTTTGTTTCCTAACCACTCAGCACTCAATGAAAGGGAAGAATGGGTAACTTTCATTACTGACTTCCCCAAACCCCCACCTGAGAGAATCACATTCACCTTGCCTGTCATCAATTCTGCATCCAATGTTGCAGTAGTTGTCACCGGTGAAAGCAAAGCGGAATCCGTACACTTGGCAATAGGCGATGTTGGACCTGATGGCCCCTTAATACCGGCGAGAATGGTCCAACCAGCTATGGGGAAGTTGGTGTGGTTTTTGGATAAACTGGCTGCCTCAAAACTTGAAGATTCCAATTTAAACAAGTAG

>Glyma.02g120200.3 sequence-type=CDS polypeptide=Glyma.02g120200.3.p locus=Glyma.02g120200 ID=Glyma.02g120200.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTAAGAATAGAGGAGAGTTGAGGATTCATGAGAGTGTGGATGAGCTAAGGACTGATTTGGCAGACTATGTTGCTGAGTTATCAGAGGCATCTGTGAAAGAGCGAGGAGTCTTTGCCATTGCTTTATCTGGTGGTTCTCTCATTGGCTTAATGGGAAAACTCTGTGAAGCTCCTTATAACAAGACAGTGGACTGGTCCAAGTGGTATATCTTCTGGGCTGACGAGCACGTTGTGGCGAAAAACCATGCCGATAGCAATTATAAGCTTGCTAAAGATGGCCTTTTGTCCAAGGTGCCTATTGTCCCTAGTCATGTGCATTCGATTAACGATTCCGTGTCAGCAGAAGAAGCTGCCGATGATTACGAGTTTGTCATTCGACAGCTGGTGAAAACCCGTGTTGTCAGCGTGTCTGAGATTAGTGATTGTCCCAAGTTTGACCTCATTCTGCTTGGATTGGGTCCAGACGGCCACATTGCCTCTTTGTTTCCTAACCACTCAGCACTCAATGAAAGGGAAGAATGGGTAACTTTCATTACTGACTTCCCCAAACCCCCACCTGAGAGAATCACATTCACCTTGCCTGTCATCAATTCTGCATCCAATGTTGCAGTAGTTGTCACCGGTGAAAGCAAAGCGGAATCCGTACACTTGGCAATAGGCGATGTTGGACCTGATGGCCCCTTAATACCGGCGAGAATGGTCCAACCAGCTATGGGGAAGTTGGTGTGGTTTTTGGATAAACTGGCTGCCTCAAAACTTGAAGATTCCAATTTAAACAAGTAG

>Glyma.02g120200.4 sequence-type=CDS polypeptide=Glyma.02g120200.4.p locus=Glyma.02g120200 ID=Glyma.02g120200.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTAAGAATAGAGGAGAGTTGAGGATTCATGAGAGTGTGGATGAGCTAAGGACTGATTTGGCAGACTATGTTGCTGAGTTATCAGAGGCATCTGTGAAAGAGCGAGGAGTCTTTGCCATTGCTTTATCTGGTGGTTCTCTCATTGGCTTAATGGGAAAACTCTGTGAAGCTCCTTATAACAAGACAGTGGACTGGTCCAAGTGGTATATCTTCTGGGCTGACGAGCACGTTGTGGCGAAAAACCATGCCGATAGCAATTATAAGCTTGCTAAAGATGGCCTTTTGTCCAAGGTGCCTATTGTCCCTAGTCATGTGCATTCGATTAACGATTCCGTGTCAGCAGAAGAAGCTGCCGATGATTACGAGTTTGTCATTCGACAGCTGGTGAAAACCCGTGTTGTCAGCGTGTCTGAGATTAGTGATTGTCCCAAGTTTGACCTCATTCTGCTTGGATTGGGTCCAGACGGCCACATTGCCTCTTTGTTTCCTAACCACTCAGCACTCAATGAAAGGGAAGAATGGGTAACTTTCATTACTGACTTCCCCAAACCCCCACCTGAGAGAATCACATTCACCTTGCCTGTCATCAATTCTGCATCCAATGTTGCAGTAGTTGTCACCGGTGAAAGCAAAGCGGAATCCGTACACTTGGCAATAGGCGATGTTGGACCTGATGGCCCCTTAATACCGGCGAGAATGGTCCAACCAGCTATGGGGAAGTTGGTGTGGTTTTTGGATAAACTGGCTGCCTCAAAACTTGAAGATTCCAATTTAAACAAGTAG

Predicted protein sequences of Glyma.02g120200

Limit To All Plant Sequences

>Glyma.02g120200.1.p sequence-type=predicted peptide transcript=Glyma.02g120200.1 locus=Glyma.02g120200 ID=Glyma.02g120200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAKNRGELRIHESVDELRTDLADYVAELSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWSKWYIFWADEHVVAKNHADSNYKLAKDGLLSKVPIVPSHVHSINDSVSAEEAADDYEFVIRQLVKTRVVSVSEISDCPKFDLILLGLGPDGHIASLFPNHSALNEREEWVTFITDFPKPPPERITFTLPVINSASNVAVVVTGESKAESVHLAIGDVGPDGPLIPARMVQPAMGKLVWFLDKLAASKLEDSNLNK*

>Glyma.02g120200.2.p sequence-type=predicted peptide transcript=Glyma.02g120200.2 locus=Glyma.02g120200 ID=Glyma.02g120200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAKNRGELRIHESVDELRTDLADYVAELSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWSKWYIFWADEHVVAKNHADSNYKLAKDGLLSKVPIVPSHVHSINDSVSAEEAADDYEFVIRQLVKTRVVSVSEISDCPKFDLILLGLGPDGHIASLFPNHSALNEREEWVTFITDFPKPPPERITFTLPVINSASNVAVVVTGESKAESVHLAIGDVGPDGPLIPARMVQPAMGKLVWFLDKLAASKLEDSNLNK*

>Glyma.02g120200.3.p sequence-type=predicted peptide transcript=Glyma.02g120200.3 locus=Glyma.02g120200 ID=Glyma.02g120200.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAKNRGELRIHESVDELRTDLADYVAELSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWSKWYIFWADEHVVAKNHADSNYKLAKDGLLSKVPIVPSHVHSINDSVSAEEAADDYEFVIRQLVKTRVVSVSEISDCPKFDLILLGLGPDGHIASLFPNHSALNEREEWVTFITDFPKPPPERITFTLPVINSASNVAVVVTGESKAESVHLAIGDVGPDGPLIPARMVQPAMGKLVWFLDKLAASKLEDSNLNK*

>Glyma.02g120200.4.p sequence-type=predicted peptide transcript=Glyma.02g120200.4 locus=Glyma.02g120200 ID=Glyma.02g120200.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAKNRGELRIHESVDELRTDLADYVAELSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWSKWYIFWADEHVVAKNHADSNYKLAKDGLLSKVPIVPSHVHSINDSVSAEEAADDYEFVIRQLVKTRVVSVSEISDCPKFDLILLGLGPDGHIASLFPNHSALNEREEWVTFITDFPKPPPERITFTLPVINSASNVAVVVTGESKAESVHLAIGDVGPDGPLIPARMVQPAMGKLVWFLDKLAASKLEDSNLNK*

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