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Report for Sequence Feature Glyma.02g112400

Feature Type:gene_model
Chromosome:Gm02
Start:10866413
stop:10868450
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g112400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G13950.1AT ATELF5A-1,EIF-5A,EIF5A,ELF5A-1 JGI N/AIEA
GO:0006452GO-bp translational frameshifting JGI N/AIEA
GO:0045901GO-bp positive regulation of translational elongation JGI N/AIEA
GO:0045905GO-bp positive regulation of translational termination JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0003746GO-mf translation elongation factor activity JGI N/AIEA
GO:0043022GO-mf ribosome binding JGI N/AIEA
K03263KEGG Translation factors JGI N/AIEA
KOG3271 KOG Translation initiation factor 5A (eIF-5A) JGI N/AIEA
PTHR11673PantherFam TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER JGI N/AIEA
PF01287Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold JGI N/AIEA

Proteins Associated with Glyma.02g112400
LocusGene SymbolProtein Name
EIF5A eukaryotic translation initiation factor 5A

Gene model name correspondences to Glyma.02g112400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g12520 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g112400
>Glyma.02g112400.1 sequence-type=CDS polypeptide=Glyma.02g112400.1.p locus=Glyma.02g112400 id=Glyma.02g112400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCAGACGAGGAGCACCACTTCGAGTCAAAGGCTGATGCTGGAGCATCAAAGACATTTCCCCAGCAAGCTGGAACCATCCGCAAAAACGGTTACATTGTCATCAAGAACAGGCCATGCAAGGTTGTGGAGGTTTCAACTTCCAAAACTGGCAAGCATGGACACGCAAAGTGTCACTTTGTTGCAATTGACATCTTCACTGGGAAAAAGCTTGAGGATATTGTCCCATCTTCCCATAACTGTGATGTTCCCCATGTTAATCGCATTGACTACCAGCTCATTGACATCTCAGAGGATGGATTTGTGAGTCTGCTGACTGAGACTGGTGGTACTAAGGATGACCTTAGGCTTCCAACCGATGAAAATCTGCTTTCGCAGATCAAGGATGGATTTGCTGAGGGCAAAGATCTGGTTGTGTCTGTTATGTCTTCCATGGGGGAGGAGCAGATTTGTGCCCTTAAGGACATTGGCCCCAAGTAA
Predicted protein sequences of Glyma.02g112400
>Glyma.02g112400.1.p sequence-type=predicted peptide transcript=Glyma.02g112400.1 locus=Glyma.02g112400 id=Glyma.02g112400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRIDYQLIDISEDGFVSLLTETGGTKDDLRLPTDENLLSQIKDGFAEGKDLVVSVMSSMGEEQICALKDIGPK*






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