SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g097300

Feature Type:gene_model
Chromosome:Gm02
Start:8697187
stop:8701169
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g097300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G10840.1AT TIF3H1 JGI N/AIEA
GO:0005737GO-cc cytoplasm JGI N/AIEA
GO:0005852GO-cc eukaryotic translation initiation factor 3 complex JGI N/AIEA
GO:0003743GO-mf translation initiation factor activity JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K03247KEGG Exosome JGI N/AIEA
KOG1560 KOG Translation initiation factor 3, subunit h (eIF-3h) JGI N/AIEA
PTHR10410PantherFam EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED JGI N/AIEA
PTHR10410:SF3PantherFam EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H JGI N/AIEA
PF01398Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease JGI N/AIEA

Gene model name correspondences to Glyma.02g097300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g10760 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g097300
>Glyma.02g097300.1 sequence-type=CDS polypeptide=Glyma.02g097300.1.p locus=Glyma.02g097300 id=Glyma.02g097300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTACCACCACCACTCCTGCTAGATCTTTTCTCCAAGTCGCCGCTACAGAGGAGGCCGCGCCGCCTCTCAGAGTCGTTCAGATTGAAGGACTGGTTATTCTGAAGATAATTAAGCATTGTAAGGACCACTCGCCTTCTTTAGTCACTGGACAACTTCTTGGGTTGGATGTTGGCAGTGTTCTTGAAGTTACCAACTGCTTCCCCTTTCCAATGAGGGAAGAGGATGAGGAAATTGAAGCTGATGGTGCTAATTATCAGCTTGAAATGATGAGGTGCCTGAGGGAGGTTAATGTTGACAACAACACCGTTGGGTGGTACCAGTCTACATTGCTTGGCTCCTTTCAGACTGTGGAGCTTATTGAAACCTTTATGAACTACCAGGAGAATATTAGACGCTGTGTTTGCATAATATATGATCCATCAAGGTCTGATCAAGGTGTTCTAGCTCTGAAGGCCTTGAAGCTTTCTGACTCATTCATGGAACTCTATCGCAGCAATAATTTTACTGGAGAGAAATTGAGGGAGAAGAACTTATCATGGGTGGATATCTTTGAGGAAATACCGATCAAAGTTTCAAATTCTGCACTTATCAGTGCCTTTATGACAGAGCTAGAACCTGATACTCCAGTCACCCAGTGTGATTATGATCGCTTGCAATTGTCAACCAGTTCATTAATGGAGAGGAATACAGAATTTTTGATTGAATGCATGGATGACTTGTCACTAGAACAACAAAAGTTCCAATTCTACTATCGGAGCCTGTCTCGTCAACAAGCTCAGCAGCAAGCATGGCTTCAAAAGAGAAGGGCGGAGAACATGGCTCGTAAAGCTGCTGGAGAAGAACCTTTGCCGGAGGAAGATCCTTCAAATCCAATTTTCAAGCCGCTCCCAGAGCCATCCCGGTTGGAGAGCTTCCTCATAACAAATCAAATTTCCAACTACTGCAATCAAATCAATGGGGTGTCAGGGCAGAGCTTTAACAGACTCTATTTGATGAAGGCTTTGCATGAGGATTGA
Predicted protein sequences of Glyma.02g097300
>Glyma.02g097300.1.p sequence-type=predicted peptide transcript=Glyma.02g097300.1 locus=Glyma.02g097300 id=Glyma.02g097300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATTTTPARSFLQVAATEEAAPPLRVVQIEGLVILKIIKHCKDHSPSLVTGQLLGLDVGSVLEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIIYDPSRSDQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSLMERNTEFLIECMDDLSLEQQKFQFYYRSLSRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPSNPIFKPLPEPSRLESFLITNQISNYCNQINGVSGQSFNRLYLMKALHED*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo