Report for Sequence Feature Glyma.02g092400
| Feature Type: | gene_model |
| Chromosome: | Gm02 |
| Start: | 8133609 |
| stop: | 8140260 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
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Annotations for Glyma.02g092400
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT1G04950.2 | AT |
ATTAF6,TAF6,TAFII59 |
JGI | N/A | IEA |
| GO:0006352 | GO-bp |
DNA-templated transcription, initiation |
JGI | N/A | IEA |
| GO:0051090 | GO-bp |
regulation of DNA-binding transcription factor activity |
JGI | N/A | IEA |
| GO:0005634 | GO-cc |
nucleus |
JGI | N/A | IEA |
| K03131 | KEGG |
Chromosome and associated proteins |
JGI | N/A | IEA |
| KOG2549 |
KOG |
Transcription initiation factor TFIID, subunit TAF6 (also component of histone acetyltransferase SAGA) |
JGI | N/A | IEA |
| PTHR10221 | PantherFam |
TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 |
JGI | N/A | IEA |
| PF02969 | Pfam |
TATA box binding protein associated factor (TAF) |
JGI | N/A | IEA |
| PF07571 | Pfam |
TAF6 C-terminal HEAT repeat domain |
JGI | N/A | IEA |
Gene model name correspondences to Glyma.02g092400 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma02g10220 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.02g092400
>Glyma.02g092400.1 sequence-type=CDS polypeptide=Glyma.02g092400.1.p locus=Glyma.02g092400 id=Glyma.02g092400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGCATTGTTCCCAAAGAGACGATTGAAGTTATCGCGCAGAGCATTGGGATCAACAATCTGTCTCATGATGTCGCTCTTGCCGTCGCTCCCGATGTCGAATACCGCATGCGCCAGATTATGCAGGAGGCAATTAAGTGCATGCGCCATTCCAAGAGAACCACTTTGACGGCAGATGATGTCGATGCTGCACTCAACTTGAAGAATGTTGAACCAATATATGGATTTGCATCTGGTGGCCCTTTACGGTTCAAAAGAGCTGTTGGACACAGAGACTTGTTTTATATTGATGACAAGGATGTAGATTTAAAAGATGTTATTGAAGCTTCTTTACCAAAGGCACCCCTTGATACTGCAGTTACATGCCACTGGCTTGCCATTGAAGGTGTGCAACCTGCTATTCCGGAAAATGCTCCTGTAGAAGTAATTTCAGCTCCTTCTGATGTCAAAAAGCATGAGCAGAAAGATGATAACCTTCCAGTTGACATCAAATTGCCTGTTAAGCATGTATTATCCAGAGAGCTTCAGCTGTATTTTGACAAAGTGGCTGAGCTAACTTTGAGCGAGTCTGATTCAGTTCTCTTTAAAGAAGCATTAGTAAGTTTGGCTACTGATTCAGGACTTCATCCACTAGTTCCTTATTTCACATGCTTTATAGCTGATGAGGTTTCTCGTGGTTTGAATAATTTTCCTCTTCTATTTGCCTTGATGCGAGTTGTTAGTAGCCTTTTGCAAAACCCTCACATCCAAATTGAACCATATCTACACCAGTTGATGCCATCTGTTGTGACTTGCCTTGTTGCTAAAAGGTTGGGCACTAGGTTGGCAGACAACCACTGGGAACTTAGAGACTTTACGGCTCATCTGGTTGCCTCAATATGTAAAAGGTTTGGACATGTTTATAGTAATCTCCAGTCTCGGTTGACAAAAACATTGCTGAATGCATTCTTGGATCCCAAGAAGGCATTGACACAACACTATGGTGCTATTCAGGGATTAGGAGCACTGGGACCCAACGTGGTTCGCCTTCTTTTGCTGCCAAACCTTGAAACATATATGCAACTTCTTGAACCAGAGATGCTTCTTGAGAAGCAAAAAAATGAATTAAAAAGGCATGAAGCTTGGAGGGTTTATGGAGCCTTGCTGCGTGCTGCAGGTCAGTGTATATATGATCGACTAAAGATTTTCCCAACTTTTCCATCTCCTCCTCTTCATGCTGTCTGGAAGACCAATTCAAAAGTTCTTACTTCTTCAACTTATAAACGCAAGGCAAGCCCTGATCAATTGGAACAGCAGCCACCTTTGAAAAAAGCTGCTACCGATGGTGAGGTTGGTGTGGACCTAATGAATTTCTCACCAGTTCATAAGCAAGAGGAGGCAGGGACTCAAGCTTCTTCAGCTGATTCAATAATTGGCACATCATCATCTTCTGCACAGATGAAAAATGAGACTACTTTAGATGGCGAACTTAGAGGTAAGAGGGGTGATACTCAGGCATTGAAGACATCTGCTGCTCTCACCCAGGTTTGGAAGGACGAGCTTAACTCAGGACGTACCCTGGTATCATTGTTTGAGTTGTTTGGTGAAGGAATTCTCTCCTTCATTAAGGCTCCTGAGATGTATATGTTCTTGTAA
Predicted protein sequences of Glyma.02g092400
>Glyma.02g092400.1.p sequence-type=predicted peptide transcript=Glyma.02g092400.1 locus=Glyma.02g092400 id=Glyma.02g092400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSIVPKETIEVIAQSIGINNLSHDVALAVAPDVEYRMRQIMQEAIKCMRHSKRTTLTADDVDAALNLKNVEPIYGFASGGPLRFKRAVGHRDLFYIDDKDVDLKDVIEASLPKAPLDTAVTCHWLAIEGVQPAIPENAPVEVISAPSDVKKHEQKDDNLPVDIKLPVKHVLSRELQLYFDKVAELTLSESDSVLFKEALVSLATDSGLHPLVPYFTCFIADEVSRGLNNFPLLFALMRVVSSLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGTRLADNHWELRDFTAHLVASICKRFGHVYSNLQSRLTKTLLNAFLDPKKALTQHYGAIQGLGALGPNVVRLLLLPNLETYMQLLEPEMLLEKQKNELKRHEAWRVYGALLRAAGQCIYDRLKIFPTFPSPPLHAVWKTNSKVLTSSTYKRKASPDQLEQQPPLKKAATDGEVGVDLMNFSPVHKQEEAGTQASSADSIIGTSSSSAQMKNETTLDGELRGKRGDTQALKTSAALTQVWKDELNSGRTLVSLFELFGEGILSFIKAPEMYMFL*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
