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Report for Sequence Feature Glyma.02g085100

Feature Type:gene_model
Chromosome:Gm02
Start:7413727
stop:7418900
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.02g085100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G24880.1AT UDP-3-O-acyl N-acetylglycosamine deacetylase family protein JGI N/AIEA
GO:0009245GO-bp lipid A biosynthetic process EnsemblGenomesN/AIEA
GO:0009245GO-bp lipid A biosynthetic process JGI N/AIEA
GO:0008759GO-mf UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity EnsemblGenomesN/AIEA
GO:0008759GO-mf UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity JGI N/AIEA
PF03331PFAM UDP-3-O-acyl N-acetylglycosamine deacetylase JGI N/AIEA
NAGLIPASYN-PWYSoyCyc9 lipid IVA biosynthesis Plant Metabolic Network ISS
GN7V-57241SoyCyc9-rxn UDP-3-O-acyl-N-acetylglucosamine deacetylase Plant Metabolic Network ISS

Expression Patterns of Glyma.02g085100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.02g085100 not represented in the dataset
Glyma.02g085100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.02g085100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g09350 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g085100
>Glyma.02g085100.1 sequence-type=CDS polypeptide=Glyma.02g085100.1.p locus=Glyma.02g085100 ID=Glyma.02g085100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCTTCCTCCAACGCTCTCAGATCATCAAAACTGGTCTCATGGAATAGAACTGGGAGGCTGCAGCAAACCCTAGCGGATTGCGTGGAGCGGCAAGGCAAGGCGTTGCATTCGGGAAAGGTTTCGACGGTGAGACTGTGTCCCGAACGCGCTTCCCGAGGCAGGTACTTCGATTTTCGTTCCAATTTCGTTCCCGCCTCTGTTGAATTCGCTCAGGTCTCGCCCCTCTGCACCACTCTGTACAAAGGCGGGTTCCGAATTCGAACCGTGGAGCACTTGCTTTCGGCTTTGGAGGCTTCGGGTGTCGATAATTGCAGGATCGAGATTGAGGATTCGGATACTCAAGGACACGACGCAGAGATTCCTATATTTGATGGGTCTGCAAGGGAATGGGTGGCTGCAGTGGAAGAAGTTGGTTTGACAGTGGCCACTGATCTTGATGGCAAAAGTGTTGAGAAAATGGCACCACATGTGAATGAACCAGTGTATGCTTGGAGAAATGATTCTTTTGTTGCTGCATTTCCTTCAGAAGTGGTTCGAATAACTTATGGCATTAACTTTTCGCAGGCACCTGTTATTGGCTGCCAGTGGTTTTCTACACCCCCCTTGGATAATTTGGTGTATTCCATGCAGATAGCTTTGTCAAGAACCTTCTGCATTTATGAAGAGGTTGAGCAAATGCGCAATGCTGGACTTATCAAAGGAGGTTCTCTAGAAAATGCCATTGTGTGCAGTGCCAGTAAAGGTTGGTTGAATCCACCTTTGCATTTCAGTGATGAACCATGTCGTCACAAGATCTTAGACCTTATTGGTGATCTGTCACTGTTTGCCCAGTTTGGGAATCAAGGACTCCCAGTGGCTCATATCGTTGCGTACAAGGCATGTGCCTTTGGTTCTGGTGGCCATGCATTGCATACTGATTTGGCACGCCGCCTGATAGGAATGATTTGA
Predicted protein sequences of Glyma.02g085100
>Glyma.02g085100.1.p sequence-type=predicted peptide transcript=Glyma.02g085100.1 locus=Glyma.02g085100 ID=Glyma.02g085100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSSSNALRSSKLVSWNRTGRLQQTLADCVERQGKALHSGKVSTVRLCPERASRGRYFDFRSNFVPASVEFAQVSPLCTTLYKGGFRIRTVEHLLSALEASGVDNCRIEIEDSDTQGHDAEIPIFDGSAREWVAAVEEVGLTVATDLDGKSVEKMAPHVNEPVYAWRNDSFVAAFPSEVVRITYGINFSQAPVIGCQWFSTPPLDNLVYSMQIALSRTFCIYEEVEQMRNAGLIKGGSLENAIVCSASKGWLNPPLHFSDEPCRHKILDLIGDLSLFAQFGNQGLPVAHIVAYKACAFGSGGHALHTDLARRLIGMI*






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