SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g081200

Feature Type:gene_model
Chromosome:Gm02
Start:6984056
stop:6986004
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g081200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G16010.1AT JGI N/AIEA
1.3.1.22EC 3-oxo-5alpha-steroid 4-dehydrogenase (NADP+) JGI N/AIEA
GO:0006629GO-bp lipid metabolic process JGI N/AIEA
GO:0005737GO-cc cytoplasm JGI N/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
GO:0016627GO-mf oxidoreductase activity, acting on the CH-CH group of donors JGI N/AIEA
KOG1638 KOG Steroid reductase JGI N/AIEA
PTHR10556PantherFam 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE JGI N/AIEA
PTHR10556:SF35PantherFam S5A_REDUCTASE DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF02544Pfam 3-oxo-5-alpha-steroid 4-dehydrogenase JGI N/AIEA

Gene model name correspondences to Glyma.02g081200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g08970 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g081200
>Glyma.02g081200.1 sequence-type=CDS polypeptide=Glyma.02g081200.1.p locus=Glyma.02g081200 id=Glyma.02g081200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTGATTATGTCTGCCTTGTTCAGCTTCATATTCCCACCACCATCTTCTCTGGTGGTTTCGGGGATGTCAGTGATAAGCCTTGTGTCACTGGCTAATGCTGGCTTCTCAGAGATTAGAGGGAAGCATTTGAACTATTCAAAGTTTTGGAATGCTAATCCCTCTGCAGAAAAGCAGGTCAAGTTGTCTAGCAAAGCTGGCATGCTTTTGCTGTACACTCCTGCTTTTCTTGCTGGCCTTGCATCCTTCTGGATCTTTCCTCATCAAGGCCTCAGATCCACCCTCCTTCAGTCTGCAGTTACCCTGCATTTCTTCAAGAGGGTCTTTGAGGTTGTGTTTATTCACAAATATAGTGGTGCCATGCTTCTTGATTCTGCAATCCCCATCACTCTGAGTTATTTCCTATCAACTGCAACTATGATCTATGCTCAACACTTAACACAAGGGCTTCCAGAACCACCAATCGATCTGTTGTATCCTGGCATTGTTTTGTTTGTGGTGGGCATCATTGGCAACTTCTACCACCACTACCTTCTATCCAACTTAAGGGGAAAGGGTGAAAAGGAGTACAAGATTCCAAAGGGTGGCATGTTTGAGCTTGTCATATGTCCCCACTACCTGTTTGAGATTATTGAGTTTTATGGGTTCTCCTTCATTTCGCAGACGCTATATGCATTCTCTTTCACCGTAGGCACTACTTTATACTTGCTAGGTAGGAGTTATTCAACTAGGAAATGGTATCTTTCTAAGTTTGAAGATTTCCCTGAGCATGTTAAGGCTATCATCCCATTTGTCTTCTAG
Predicted protein sequences of Glyma.02g081200
>Glyma.02g081200.1.p sequence-type=predicted peptide transcript=Glyma.02g081200.1 locus=Glyma.02g081200 id=Glyma.02g081200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVIMSALFSFIFPPPSSLVVSGMSVISLVSLANAGFSEIRGKHLNYSKFWNANPSAEKQVKLSSKAGMLLLYTPAFLAGLASFWIFPHQGLRSTLLQSAVTLHFFKRVFEVVFIHKYSGAMLLDSAIPITLSYFLSTATMIYAQHLTQGLPEPPIDLLYPGIVLFVVGIIGNFYHHYLLSNLRGKGEKEYKIPKGGMFELVICPHYLFEIIEFYGFSFISQTLYAFSFTVGTTLYLLGRSYSTRKWYLSKFEDFPEHVKAIIPFVF*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo