SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g077400

Feature Type:gene_model
Chromosome:Gm02
Start:6674838
stop:6679381
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g077400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G71770.2AT PAB5 JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
K13126KEGG Spliceosome JGI N/AIEA
KOG0123 KOG Polyadenylate-binding protein (RRM superfamily) JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF00658Pfam Poly-adenylate binding protein, unique domain JGI N/AIEA

Gene model name correspondences to Glyma.02g077400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g08480 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g077400
>Glyma.02g077400.1 sequence-type=CDS polypeptide=Glyma.02g077400.1.p locus=Glyma.02g077400 id=Glyma.02g077400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGGCGGCGATGGTTCCAGCAGGAGCATTGAACGGTATGCAATCTGGGAATGCCTCTTTGTACGTTGGTGATCTTGAAAGGAACGTTGACGAGGCGCAGCTGTTTCAACTGTTTGCCCGAGTGGGCCCAATATTTTCAATTAGAGTTTGTAGGGATGAGACAAACCGATCTCTTGGATATGCTTATGTTAACTTTGTCAACCCACAGGATGCTGCTAATGCCATGGAGCATCTGAATTTCACTCCTCTGAATGGAAAATCCATTCGTGTTATGTTTTCTAACCGAGATCCTAGCATTCGAAAAAGTGGATATGCAAATGTGTTTATCAAGAACCTTGACATATCAATAGATAACAAGACATTGCATGACACTTTTGCTGCCTTTGGATTTGTACTCTCTAGTAAGGTAGCCGTTGATAGCATTGGTCAGTCGAAAGGGTATGGATTTGTGCAATTTGACAATGAAGAGTCTGCGCAAAATGCTATCAAAGAGTTGAATGGCATGTTGATAAATGATAAAAAAGTCTATGTTGGACTCTTTGTTAATCGCCAGGAAAGGGCTCAGGTAGATGGATCACCAAAGTTCACCAATGTGTATGTGAAAAACTTTTCCGAAACATATACTGATGAAGATCTTGAGCAGCTCTTTAGCACCTATGGTACAATAACTAGTGCTGTGGTCATGAAAGACACAGATGGAAAATCTAGATGTTTTGGTTTTGTGAATTTCGAAAGTCCAGATTCAGCGGTTGCTGCGGTTGAAAGGTTAAACGGAACCACAGTCAATGATGATAAGGTTTTATATGTAGGGAGAGCTCAAAGAAAAGCAGAAAGAGAGGCGGAGTTGAAAGCCAGATTTGAGTTGGAAAGAATAAGGAAATATGAAAAATACCATGGTACTAATTTGTACGTGAAAAACCTTGACTATAATATCAATGATGACAAATTGAAGGAGCTGTTTTCTGAGTTTGGAACAATAACATCTTGCAAGGTGATGCTTGAACCGAATGGGCGTAGCAAGGGTTATGGTTTTGTTGCCTTTTCTGCTCCTCGGAATGCAAATAGAGCCTTGCATGAAATGAATGGAAAGATGATTGGACGGAGGCCCCTATATGTAGCTGTGGCCCAACGCAAAGAAGAGAGGAAGGCTCTTTTGGAGGCTCAATTTTCTCAAATGCATGCCCTATATGCAATCACGCATTTACCTACGGGAATCCCTGTATATCATCCAGGGGCACCAAGACATGGCCCTCAAGCATTGCATTATGGTCAAGGGGCACCAAGTCTTGTAGCACCTCAACCAACAGGATATGGTTTCCAGCAGCAGCTCTTGCCGGGCATGCATCCTGGTGTTGCTCCAAATTTCATCATGCCATACCACCGCCAGAGACAGGTTCCTCCAAGACTTAGAAATCTCCACCGGAACCAGATGTTGCATCTTAACTCCAGCCAAGGGTTTGGATACATGGGAAATGGTCAAAATGGCATGGATCCGTCAGTAGTTCCCCATGGTATAGTGGCTCCAATGATGCCATTGCCCTTTGATGGTTCAGGAATTTCCGCAGCTCCTACTTATAATCAGCATCCTGGTGGTTCATTGTCCAACACATTTGCCTCAGCTCTGGCTTCTGCTACCCCAGAAAATCAGCACCTGATGCTAGCTGAACATCTATATCCACTTGTGGACGAAATTACTAAAAATCATCATCAGACTGAAAAGGTGACAGGAATGTTGTTGGAAATGGATCAGTCGGAGGTCATCCATCTGACTGAGTCTCCCGAGGACTTGAAAATAAAGGTGTTTGAGGCAATGCAGGCCCTTGGTGAAGCCGCACCAGATTCTGAAGAAGTTGGTGATCAACTTGGCTCAGTCTCATTGAAGGAATGA

>Glyma.02g077400.2 sequence-type=CDS polypeptide=Glyma.02g077400.2.p locus=Glyma.02g077400 id=Glyma.02g077400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGGCGGCGATGGTTCCAGCAGGAGCATTGAACGGTATGCAATCTGGGAATGCCTCTTTGTACGTTGGTGATCTTGAAAGGAACGTTGACGAGGCGCAGCTGTTTCAACTGTTTGCCCGAGTGGGCCCAATATTTTCAATTAGAGTTTGTAGGGATGAGACAAACCGATCTCTTGGATATGCTTATGTTAACTTTGTCAACCCACAGGATGCTGCTAATGCCATGGAGCATCTGAATTTCACTCCTCTGAATGGAAAATCCATTCGTGTTATGTTTTCTAACCGAGATCCTAGCATTCGAAAAAGTGGATATGCAAATGTGTTTATCAAGAACCTTGACATATCAATAGATAACAAGACATTGCATGACACTTTTGCTGCCTTTGGATTTGTACTCTCTAGTAAGGTAGCCGTTGATAGCATTGGTCAGTCGAAAGGGTATGGATTTGTGCAATTTGACAATGAAGAGTCTGCGCAAAATGCTATCAAAGAGTTGAATGGCATGTTGATAAATGATAAAAAAGTCTATGTTGGACTCTTTGTTAATCGCCAGGAAAGGGCTCAGGTAGATGGATCACCAAAGTTCACCAATGTGTATGTGAAAAACTTTTCCGAAACATATACTGATGAAGATCTTGAGCAGCTCTTTAGCACCTATGGTACAATAACTAGTGCTGTGGTCATGAAAGACACAGATGGAAAATCTAGATGTTTTGGTTTTGTGAATTTCGAAAGTCCAGATTCAGCGGTTGCTGCGGTTGAAAGGTTAAACGGAACCACAGTCAATGATGATAAGGTTTTATATGTAGGGAGAGCTCAAAGAAAAGCAGAAAGAGAGGCGGAGTTGAAAGCCAGATTTGAGTTGGAAAGAATAAGGAAATATGAAAAATACCATGGTACTAATTTGTACGTGAAAAACCTTGACTATAATATCAATGATGACAAATTGAAGGAGCTGTTTTCTGAGTTTGGAACAATAACATCTTGCAAGGTGATGCTTGAACCGAATGGGCGTAGCAAGGGTTATGGTTTTGTTGCCTTTTCTGCTCCTCGGAATGCAAATAGAGCCTTGCATGAAATGAATGGAAAGATGATTGGACGGAGGCCCCTATATGTAGCTGTGGCCCAACGCAAAGAAGAGAGGAAGGCTCTTTTGGAGGCTCAATTTTCTCAAATGCATGCCCTATATGCAATCACGCATTTACCTACGGGAATCCCTGTATATCATCCAGGGGCACCAAGACATGGCCCTCAAGCATTGCATTATGGTCAAGGGGCACCAAGTCTTGTAGCACCTCAACCAACAGGATATGGTTTCCAGCAGCAGCTCTTGCCGGGCATGCATCCTGGTGTTGCTCCAAATTTCATCATGCCATACCACCGCCAGAGACAGGTTCCTCCAAGACTTAGAAATCTCCACCGGAACCAGATGTTGCATCTTAACTCCAGCCAAGGGTTTGGATACATGGGAAATGGTCAAAATGGCATGGATCCGTCAGTAGTTCCCCATGGTATAGTGGCTCCAATGATGCCATTGCCCTTTGATGGTTCAGGAATTTCCGCAGCTCCTACTTATAATCAGCATCCTGGTGGTTCATTGTCCAACACATTTGCCTCAGCTCTGGCTTCTGCTACCCCAGAAAATCAGCACCTGATGCTAGCTGAACATCTATATCCACTTGTGGACGAAATTACTAAAAATCATCATCAGACTGAAAAGGTGACAGGAATGTTGTTGGAAATGGATCAGTCGGAGGTCATCCATCTGACTGAGTCTCCCGAGGACTTGAAAATAAAGGTGTTTGAGGCAATGCAGGCCCTTGGTGAAGCCGCACCAGATTCTGAAGAAGTTGGTGATCAACTTGGCTCAGTCTCATTGAAGGAATGA
Predicted protein sequences of Glyma.02g077400
>Glyma.02g077400.1.p sequence-type=predicted peptide transcript=Glyma.02g077400.1 locus=Glyma.02g077400 id=Glyma.02g077400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAAAMVPAGALNGMQSGNASLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDETNRSLGYAYVNFVNPQDAANAMEHLNFTPLNGKSIRVMFSNRDPSIRKSGYANVFIKNLDISIDNKTLHDTFAAFGFVLSSKVAVDSIGQSKGYGFVQFDNEESAQNAIKELNGMLINDKKVYVGLFVNRQERAQVDGSPKFTNVYVKNFSETYTDEDLEQLFSTYGTITSAVVMKDTDGKSRCFGFVNFESPDSAVAAVERLNGTTVNDDKVLYVGRAQRKAEREAELKARFELERIRKYEKYHGTNLYVKNLDYNINDDKLKELFSEFGTITSCKVMLEPNGRSKGYGFVAFSAPRNANRALHEMNGKMIGRRPLYVAVAQRKEERKALLEAQFSQMHALYAITHLPTGIPVYHPGAPRHGPQALHYGQGAPSLVAPQPTGYGFQQQLLPGMHPGVAPNFIMPYHRQRQVPPRLRNLHRNQMLHLNSSQGFGYMGNGQNGMDPSVVPHGIVAPMMPLPFDGSGISAAPTYNQHPGGSLSNTFASALASATPENQHLMLAEHLYPLVDEITKNHHQTEKVTGMLLEMDQSEVIHLTESPEDLKIKVFEAMQALGEAAPDSEEVGDQLGSVSLKE*

>Glyma.02g077400.2.p sequence-type=predicted peptide transcript=Glyma.02g077400.2 locus=Glyma.02g077400 id=Glyma.02g077400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAAAMVPAGALNGMQSGNASLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDETNRSLGYAYVNFVNPQDAANAMEHLNFTPLNGKSIRVMFSNRDPSIRKSGYANVFIKNLDISIDNKTLHDTFAAFGFVLSSKVAVDSIGQSKGYGFVQFDNEESAQNAIKELNGMLINDKKVYVGLFVNRQERAQVDGSPKFTNVYVKNFSETYTDEDLEQLFSTYGTITSAVVMKDTDGKSRCFGFVNFESPDSAVAAVERLNGTTVNDDKVLYVGRAQRKAEREAELKARFELERIRKYEKYHGTNLYVKNLDYNINDDKLKELFSEFGTITSCKVMLEPNGRSKGYGFVAFSAPRNANRALHEMNGKMIGRRPLYVAVAQRKEERKALLEAQFSQMHALYAITHLPTGIPVYHPGAPRHGPQALHYGQGAPSLVAPQPTGYGFQQQLLPGMHPGVAPNFIMPYHRQRQVPPRLRNLHRNQMLHLNSSQGFGYMGNGQNGMDPSVVPHGIVAPMMPLPFDGSGISAAPTYNQHPGGSLSNTFASALASATPENQHLMLAEHLYPLVDEITKNHHQTEKVTGMLLEMDQSEVIHLTESPEDLKIKVFEAMQALGEAAPDSEEVGDQLGSVSLKE*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo