SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g047800

Feature Type:gene_model
Chromosome:Gm02
Start:4377508
stop:4379851
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g047800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G07090.1AT JGI N/AIEA
GO:0006412GO-bp translation JGI N/AIEA
GO:0005622GO-cc intracellular anatomical structure JGI N/AIEA
GO:0005840GO-cc ribosome JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0003735GO-mf structural constituent of ribosome JGI N/AIEA
K02987KEGG Ribosome JGI N/AIEA
KOG0378 KOG 40S ribosomal protein S4 JGI N/AIEA
PTHR11581PantherFam 30S/40S RIBOSOMAL PROTEIN S4 JGI N/AIEA
PF00467Pfam KOW motif JGI N/AIEA
PF00900Pfam Ribosomal family S4e JGI N/AIEA
PF01479Pfam S4 domain JGI N/AIEA
PF08071Pfam RS4NT (NUC023) domain JGI N/AIEA
PF16121Pfam 40S ribosomal protein S4 C-terminus JGI N/AIEA

Gene model name correspondences to Glyma.02g047800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g05370 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g047800
>Glyma.02g047800.1 sequence-type=CDS polypeptide=Glyma.02g047800.1.p locus=Glyma.02g047800 id=Glyma.02g047800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTTGCTCCTAAGCCCTCATCTGGACCACACAAATCCAGGGAATGCCTGCCACTCATACTCATTTTGCGAAACCGGCTGAAGTATGCTCTGACATACCGTGAAGTCATTGCTATTCTGATGCAGCGACATGTCCTTGTTGATGGCAAAGTCAGGACAGACAAGACATATCCTGCTGGTTTCATGGATGTTGTATCAATCCCTAAAACAAATGAGAACTTCCGCCTGCTGTATGACACCAAAGGCCGATTCCGTCTTCACTCAGTCATAGATGACGAGGCTAAGTTCAAGCTTTGCAAAGTTCGCTCAGTGCAGTTTGGGCAAAAAGGTATCCCATACTTGAACACCTACGATGGTCGCACTATCCGCTACCCAGACCCTCTCATCAGAGCTAATGACACCATTAAGTTGGATTTGGAGGAGAACAAGATTGTCGATTTCATCAAGTTTGATGTTGGGAATGTAGTCATGGTGACAGGTGGAAGGAATAGGGGTCGTGTTGGAGTGATCAAGAACAGAGAGAAGCATAAGGGAAGCTTTGAGACTATCCATGTTCAGGATGCCACTGGCCACGAGTTTGCAACTCGTATGGGCAATGTGTTCACCATTGGCAAGGGAACAAAACCATGGATATCTCTTCCCAAGGGTAAAGGTATTAAACTATCAATCATTGAGGAAGCTAGGAAAAGGATTGCCGCCCAACAAGCAACTGCTGCTTAA
Predicted protein sequences of Glyma.02g047800
>Glyma.02g047800.1.p sequence-type=predicted peptide transcript=Glyma.02g047800.1 locus=Glyma.02g047800 id=Glyma.02g047800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVIDDEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQATAA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo