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Report for Sequence Feature Glyma.02g047500

Feature Type:gene_model
Chromosome:Gm02
Start:4354814
stop:4356050
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g047500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G36020.1AT CSDP1 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
K09250KEGG Transcription factors JGI N/AIEA
PTHR11544PantherFam COLD SHOCK DOMAIN CONTAINING PROTEINS JGI N/AIEA
PF00098Pfam Zinc knuckle JGI N/AIEA
PF00313Pfam 'Cold-shock' DNA-binding domain JGI N/AIEA

Gene model name correspondences to Glyma.02g047500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g05335 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g047500
>Glyma.02g047500.1 sequence-type=CDS polypeptide=Glyma.02g047500.1.p locus=Glyma.02g047500 id=Glyma.02g047500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGGAAGAGCGATTCACGGGCGTGGTGCAGTGGTTCAACAATGGCAAGGGCTTCGGCTTCATCAAGCCCGACGACGGCGGCGAGGATCTCTTCGTTCACCAGTCCTCCATCAGATCCGACGGCTACCGCACCCTCCTCGAGGGCGACCGCGTCGAGTTCGCCATCGCCACCGGCGACAACGACAAGACCAAGGCCGTCGACGTCACCGGCGTCGACGGCGCCCCTCTCCAGCCCCGCGCAGCCGCCGGCAACAACAACCGCGCCGCCGGCTCTGGCTTCGGTTTCGGCGCCAGGCGCAATGGCGGAGGCGGCGCCGCGTGCTACCAGTGTGGCGAGTTTGGACACCTCGCCAGGGATTGCAACAGGAGCAGTAATTCTGGTGGCGGCGGAGGCGGCAGCGGCGGTGGTTGTTTCAATTGCGGGGGGTTCGGCCACCTCGCGAGAGATTGCGTGCGCGGAGGCGGCGGCAGTGTAGGCATTGGAGGTGGTGGCGGAGGCGGATCTTGCTTTAGGTGTGGCGGATTTGGACACATGGCGAGGGATTGCGCCACCGGGAAGGGCAACATTGGCGGTGGAGGAAGCGGTGGAGGTTGTTTTCGGTGTGGGGAGGTTGGTCATTTGGCTAGGGATTGCGGCATGGAAGGAGGGAGATTTGGTGGTGGTGGCGGAAGCGGCGGCGGCGGTGGAAAAAGCACTTGCTTTAATTGTGGGAAGCCAGGGCATTTTGCGAGGGAATGTGTTGAAGCTTCAGGTTGA
Predicted protein sequences of Glyma.02g047500
>Glyma.02g047500.1.p sequence-type=predicted peptide transcript=Glyma.02g047500.1 locus=Glyma.02g047500 id=Glyma.02g047500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAEERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATGDNDKTKAVDVTGVDGAPLQPRAAAGNNNRAAGSGFGFGARRNGGGGAACYQCGEFGHLARDCNRSSNSGGGGGGSGGGCFNCGGFGHLARDCVRGGGGSVGIGGGGGGGSCFRCGGFGHMARDCATGKGNIGGGGSGGGCFRCGEVGHLARDCGMEGGRFGGGGGSGGGGGKSTCFNCGKPGHFARECVEASG*






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