SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g044200

Feature Type:gene_model
Chromosome:Gm02
Start:4081343
stop:4086382
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g044200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G66060.1AT JGI N/AIEA
1.14.11.2EC procollagen-proline 4-dioxygenase JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
K00472KEGG Arginine and proline metabolism JGI N/AIEA
PTHR10869PantherFam PROLYL 4-HYDROXYLASE ALPHA SUBUNIT JGI N/AIEA
PF03171Pfam 2OG-Fe(II) oxygenase superfamily JGI N/AIEA

Gene model name correspondences to Glyma.02g044200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments


Coding sequences of Glyma.02g044200
>Glyma.02g044200.1 sequence-type=CDS polypeptide=Glyma.02g044200.1.p locus=Glyma.02g044200 id=Glyma.02g044200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTGAAAGCCAGACAGTGTTCTCGGCTGTGGCCTCGCAAATCATGGTGGCGGGTTTCGTCTCCGGCCACGCTCACTCTGCTGCTGCTGACTTGCTCCTTCCTCACTCTCATTCTTCTAGCTCTCCACATTCTCTCCACTCCCCATGCCAATGCCAACTCCTCCGTTTCTCGCAACACTCACATCGAAGCTGAAGAAGACGACCAGGTAGCGTTGCGGATGGAAGTAATATCCTGGCAGCCCAGAGCTTTTCTCTATCATAACTTTCTGACCAAGGAGGAATGTGAATATCTAATTAATATTGCCACACCACACATGCAAAAATCAACAGTTGCTGATAATCAATCTGGACAGAGTGTAGTCCACGACGTACGGAAAAGCACTGGTGCTTTTCTGGACAGAGGACAAGATGAAATTGTGAGGAATATTGAGAAGAGAATAGCTGATGTTACTTTTATACCCATAGAGAATGGTGAACCAATTTATGTTATCCATTATGAAGTTGGACAATATTATGATCCTCATTATGACTACTTTATTGACGATTTTAACATTGAGAACGGGGGTCAGCGGATAGCAACAATGTTGATGTACCTTTCAAATGTTGAAGAAGGGGGTGAGACAATGTTCCCACGTGCCAAAGCAAATTTTAGCTCTGTGCCTTGGTGGAATGAGCTTTCTAATTGTGGAAAAATGGGACTTTCAATTAAGCCAAAGATGGGTGATGCTTTACTTTTCTGGAGCATGAAGCCTAATGCAACTTTAGATGCATTGACTTTGCATAGTGCTTGTCCGGTGATTAAGGGTAATAAGTGGTCATGTACCAAATGGATGCATCCCACTGAATTCAAAATGGTTTAA

>Glyma.02g044200.2 sequence-type=CDS polypeptide=Glyma.02g044200.2.p locus=Glyma.02g044200 id=Glyma.02g044200.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCAATGCCAACTCCTCCGTTTCTCGCAACACTCACATGTATCGTATCTCTACTCTGCTTCATTCTGCTACATTTCCTTCACTCTTTCTCTGTTTTATGCCTATGCAGCGAAGCTGAAGAAGACGACCAGGTAGCGTTGCGGATGGAAGTAATATCCTGGCAGCCCAGAGCTTTTCTCTATCATAACTTTCTGACCAAGGAGGAATGTGAATATCTAATTAATATTGCCACACCACACATGCAAAAATCAACAGTTGCTGATAATCAATCTGGACAGAGTGTAGTCCACGACGTACGGAAAAGCACTGGTGCTTTTCTGGACAGAGGACAAGATGAAATTGTGAGGAATATTGAGAAGAGAATAGCTGATGTTACTTTTATACCCATAGAGAATGGTGAACCAATTTATGTTATCCATTATGAAGTTGGACAATATTATGATCCTCATTATGACTACTTTATTGACGATTTTAACATTGAGAACGGGGGTCAGCGGATAGCAACAATGTTGATGTACCTTTCAAATGTTGAAGAAGGGGGTGAGACAATGTTCCCACGTGCCAAAGCAAATTTTAGCTCTGTGCCTTGGTGGAATGAGCTTTCTAATTGTGGAAAAATGGGACTTTCAATTAAGCCAAAGATGGGTGATGCTTTACTTTTCTGGAGCATGAAGCCTAATGCAACTTTAGATGCATTGACTTTGCATAGTGCTTGTCCGGTGATTAAGGGTAATAAGTGGTCATGTACCAAATGGATGCATCCCACTGAATTCAAAATGGTTTAA

>Glyma.02g044200.3 sequence-type=CDS polypeptide=Glyma.02g044200.3.p locus=Glyma.02g044200 id=Glyma.02g044200.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCAATGCCAACTCCTCCGTTTCTCGCAACACTCACATGTATCGTATCTCTACTCTGCTTCATTCTGCTACATTTCCTTCACTCTTTCTCTGTTTTATGCCTATGCAGCGAAGCTGAAGAAGACGACCAGGTAGCGTTGCGGATGGAAGTAATATCCTGGCAGCCCAGAGCTTTTCTCTATCATAACTTTCTGACCAAGGAGGAATGTGAATATCTAATTAATATTGCCACACCACACATGCAAAAATCAACAGTTGCTGATAATCAATCTGGACAGAGTGTAGTCCACGACGTACGGAAAAGCACTGGTGCTTTTCTGGACAGAGGACAAGATGAAATTGTGAGGAATATTGAGAAGAGAATAGCTGATGTTACTTTTATACCCATAGAGAATGGTGAACCAATTTATGTTATCCATTATGAAGTTGGACAATATTATGATCCTCATTATGACTACTTTATTGACGATTTTAACATTGAGAACGGGGGTCAGCGGATAGCAACAATGTTGATGTACCTTTCAAATGTTGAAGAAGGGGGTGAGACAATGTTCCCACGTGCCAAAGCAAATTTTAGCTCTGTGCCTTGGTGGAATGAGCTTTCTAATTGTGGAAAAATGGGACTTTCAATTAAGCCAAAGATGGGTGATGCTTTACTTTTCTGGAGCATGAAGCCTAATGCAACTTTAGATGCATTGACTTTGCATAGTTAG
Predicted protein sequences of Glyma.02g044200
>Glyma.02g044200.1.p sequence-type=predicted peptide transcript=Glyma.02g044200.1 locus=Glyma.02g044200 id=Glyma.02g044200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVKARQCSRLWPRKSWWRVSSPATLTLLLLTCSFLTLILLALHILSTPHANANSSVSRNTHIEAEEDDQVALRMEVISWQPRAFLYHNFLTKEECEYLINIATPHMQKSTVADNQSGQSVVHDVRKSTGAFLDRGQDEIVRNIEKRIADVTFIPIENGEPIYVIHYEVGQYYDPHYDYFIDDFNIENGGQRIATMLMYLSNVEEGGETMFPRAKANFSSVPWWNELSNCGKMGLSIKPKMGDALLFWSMKPNATLDALTLHSACPVIKGNKWSCTKWMHPTEFKMV*

>Glyma.02g044200.2.p sequence-type=predicted peptide transcript=Glyma.02g044200.2 locus=Glyma.02g044200 id=Glyma.02g044200.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPMPTPPFLATLTCIVSLLCFILLHFLHSFSVLCLCSEAEEDDQVALRMEVISWQPRAFLYHNFLTKEECEYLINIATPHMQKSTVADNQSGQSVVHDVRKSTGAFLDRGQDEIVRNIEKRIADVTFIPIENGEPIYVIHYEVGQYYDPHYDYFIDDFNIENGGQRIATMLMYLSNVEEGGETMFPRAKANFSSVPWWNELSNCGKMGLSIKPKMGDALLFWSMKPNATLDALTLHSACPVIKGNKWSCTKWMHPTEFKMV*

>Glyma.02g044200.3.p sequence-type=predicted peptide transcript=Glyma.02g044200.3 locus=Glyma.02g044200 id=Glyma.02g044200.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPMPTPPFLATLTCIVSLLCFILLHFLHSFSVLCLCSEAEEDDQVALRMEVISWQPRAFLYHNFLTKEECEYLINIATPHMQKSTVADNQSGQSVVHDVRKSTGAFLDRGQDEIVRNIEKRIADVTFIPIENGEPIYVIHYEVGQYYDPHYDYFIDDFNIENGGQRIATMLMYLSNVEEGGETMFPRAKANFSSVPWWNELSNCGKMGLSIKPKMGDALLFWSMKPNATLDALTLHS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo