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Report for Sequence Feature Glyma.02g043700

Feature Type:gene_model
Chromosome:Gm02
Start:4070841
stop:4073516
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.02g043700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G38290.1AT ammonium transporter 2 JGI N/AIEA
GO:0015696GO-bp ammonium transport EnsemblGenomesN/AIEA
GO:0015696GO-bp ammonium transport JGI N/AIEA
GO:0072488GO-bp ammonium transmembrane transport EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0008519GO-mf ammonium transmembrane transporter activity EnsemblGenomesN/AIEA
GO:0008519GO-mf ammonium transmembrane transporter activity JGI N/AIEA
KOG0682 KOG Ammonia permease JGI N/AIEA
PTHR11730Panther AMMONIUM TRANSPORTER JGI N/AIEA
PTHR11730:SF1Panther JGI N/AIEA
PF00909PFAM Ammonium Transporter Family JGI N/AIEA

Proteins Associated with Glyma.02g043700
LocusGene SymbolProtein Name
AMT4.4 ammonium transporter AMT4.4

Expression Patterns of Glyma.02g043700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.02g043700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g04960 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g043700
>Glyma.02g043700.1 sequence-type=CDS polypeptide=Glyma.02g043700.1.p locus=Glyma.02g043700 ID=Glyma.02g043700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGTTCTAGTTCTTATGATATCCCTTTGCCATCGTCCCTTTTGCCAAGCGAGGCATCGCCGGAGTGGAACAACAAAGCAGACAACGCGTGGCAGCTCACGGCGGCAACCCTAGTGGGCCTCCAGAGCGTTCCCGGGCTCGTGATCCTATATGGCAGCATGGTAAAGCGCAAATGGGCCGTGAACTCGGCGTTCATGGCCCTGTACGCCTTCGCGTGTGTGCTCATTTGTTGGGTTTCATGGGCACACCGCATGGCGTTCGGGGCCAGGCTTTTACCCTTTGTGGGAGCGCCCAACCATGCCTTGGCCGAGAAGTTTCTCCTCGCAAAGTCAACAATTGGGTATTTTCCAATGGCTGACTTTGTGTTCTACCAGTTTGCTTTTGCCGCAATTACTCTTGTGTTGCTTGCAGGGTCCTTGCTTGGGAGAATGAACTTCTATGCGTGGATGATGTTTGTCCCTTTGTGGCTTACGTTGTCTTATACCGTTGGTGCCTTCAGCATATGGGACGATGATGGGTTCCTTCAGGGAAAAATAATTGACTATGCTGGTGGGTTTGTCATTCATTTGTCTTCTGGCGTTGGGGGGGGTCACAGCTGCTTATCGATAACAGGATATAACATTGAAATTGTAACCTTTAATTTGATTCATTCAGTTGGTCCAAGAATTTCACAGGACAGGCAAAACTTTCCACCAAACAACATAATTCACGTGCTTGGAGGTGCAGGGTTTTTGTGGATGGGTTGGACAGGTTTCAATGGTGGAGCTCCATTTCAAGTGGGAGAAATCGCATCCTTGGCCATTTACAATACCCATCTTTGCACTGCCACAAGCCTACTCGTTTGGCTTACGCTTGACATGATTGTATATACCAAGAGCTCAGTCATAGGTGCTGTCCAGGGAATGATCACTGGCCTCGTCTGCATCACACCAGGTGCAGGCTTGGTGGATCCATGGGCAGCAGTATTGATGGGAGCATTGTCTGGTTCCATTCCATGGTACACAATGATGGTGCTACACAAAAAATCCGCATTCTTTCAAAGTGTAGATGACACATTAGGAGTCTTTCACACTCATGCTGTGGCTGGTCTTCTTGGGGGTATCCTTTCTGGCGTGTTTGCCAAACCCGACCTTCTAAGAATAATGTATCAAGATACAAATTATTGCCCCGGCTTATTCTACACCTTTTTTAAGGGGGAAGTGGACCATGGCTTTAGGCAAATTTGGTACCAATTACTTGGAGCAGGTTTTATTATTGTTTGGAATGTTGTTATTACTAGCCTCATTTGTATTCTCATAAGCCGCATTGTGGATCTTAGGATGAAAGAAGAGGATCTTGAGGTTGGTGATGATGCTGCCCATGGGGAAGAAGCATATGCATTGTGGGGTGATGGAGAGAGAATGAGGATCCCTCTTCGTCTTCATATAGGTCCAACAATTCCTTCCTTGTGCCGAAAAAGGTTTTCAATTCCTCTCACTAGGAAAGAAGGAGAATAG
Predicted protein sequences of Glyma.02g043700
>Glyma.02g043700.1.p sequence-type=predicted peptide transcript=Glyma.02g043700.1 locus=Glyma.02g043700 ID=Glyma.02g043700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSSSSYDIPLPSSLLPSEASPEWNNKADNAWQLTAATLVGLQSVPGLVILYGSMVKRKWAVNSAFMALYAFACVLICWVSWAHRMAFGARLLPFVGAPNHALAEKFLLAKSTIGYFPMADFVFYQFAFAAITLVLLAGSLLGRMNFYAWMMFVPLWLTLSYTVGAFSIWDDDGFLQGKIIDYAGGFVIHLSSGVGGGHSCLSITGYNIEIVTFNLIHSVGPRISQDRQNFPPNNIIHVLGGAGFLWMGWTGFNGGAPFQVGEIASLAIYNTHLCTATSLLVWLTLDMIVYTKSSVIGAVQGMITGLVCITPGAGLVDPWAAVLMGALSGSIPWYTMMVLHKKSAFFQSVDDTLGVFHTHAVAGLLGGILSGVFAKPDLLRIMYQDTNYCPGLFYTFFKGEVDHGFRQIWYQLLGAGFIIVWNVVITSLICILISRIVDLRMKEEDLEVGDDAAHGEEAYALWGDGERMRIPLRLHIGPTIPSLCRKRFSIPLTRKEGE*






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