SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g011800

Feature Type:gene_model
Chromosome:Gm02
Start:1082228
stop:1086663
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g011800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G02560.1AT CLPP5,NCLPP1,NCLPP5 JGI N/AIEA
3.4.21.92EC Endopeptidase Clp JGI N/AIEA
K01358KEGG Peptidases and inhibitors JGI N/AIEA
KOG0840 KOG ATP-dependent Clp protease, proteolytic subunit JGI N/AIEA
PTHR10381PantherFam ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT JGI N/AIEA
PTHR10381:SF12PantherFam ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 5, CHLOROPLASTIC JGI N/AIEA
PF00574Pfam Clp protease JGI N/AIEA

Gene model name correspondences to Glyma.02g011800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g01510 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g011800
>Glyma.02g011800.1 sequence-type=CDS polypeptide=Glyma.02g011800.1.p locus=Glyma.02g011800 id=Glyma.02g011800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGCACACATCCCTTTTCACTCCCTCTTCCTCTCTTAGGTTCAACCCTCTTCTTCTTACCTCCACCCCCTCTTCTTCTTCTTCTTCTCGCTCCAACAACCTTTCTTTCCCCGCTCTCTCCAGCCTTGCTTTGATTTGCAGGAACCTAAGGAAATCGGTAGAAGATAGAAAGATTAACAAAAAATCTGCTGTGAAAGCAGTGTATGGTGATGAATTTTGGACACCTGAGAGGAGTTCACGTCCGGGTATTTGGTCTATAAGGAGTGATTTGCAAGTCCCATCTTCCCCTTATTTCCCTACCTATGCACAAGGGCAAGGGCCACCCCCCATGGTTGCCGAGCGTTTCCAGAGTGTTATAAGTCAGCTTTTTCAATATAGAATAATTCGGTGTGGTGGAGCAGTTGATGACGATATGGCAAACATCATAGTTGCTCAGCTCCTGTACCTTGATGCTGTTGATCCTAACAAGGATATTGTCATGTATGTAAATTCTCCAGGAGGGTCAGTTACAGCTGGAATGGCAATATTTGATACAATGAGGCATATCCGACCTGATGTGTCTACTGTTTGTGTTGGATTAGCGGCTAGTATGGGAGCTTTTCTGCTGAGTGCAGGGACAAAAGGAAAGAGATACAGCTTGCCAAATTCAAGGATAATGATTCATCAACCGCTTGGTGGTGCTCAAGGAGGGCAAACTGACATAGATATTCAGGCTAATGAAATGCTGCATCACAAGGCAAATCTGAATGGATATCTCGCCTATCATACCGGCCAAAGTTTAGATAAGATCAACCAGGATACAGACCGTGACTTTTTCATGAGTGCAAAAGAAGCCAAGGAATATGGACTCATAGATGGAGTCATTATGAATCCTCTCAAAGCTCTCCAGCCATTAGAGGCTGCAGCAGAAGGTAAAGATCGGGCTAGTGTTTGA

>Glyma.02g011800.2 sequence-type=CDS polypeptide=Glyma.02g011800.2.p locus=Glyma.02g011800 id=Glyma.02g011800.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGCACACATCCCTTTTCACTCCCTCTTCCTCTCTTAGGTTCAACCCTCTTCTTCTTACCTCCACCCCCTCTTCTTCTTCTTCTTCTCGCTCCAACAACCTTTCTTTCCCCGCTCTCTCCAGGAACCTAAGGAAATCGGTAGAAGATAGAAAGATTAACAAAAAATCTGCTGTGAAAGCAGTGTATGGTGATGAATTTTGGACACCTGAGAGGAGTTCACGTCCGGGTATTTGGTCTATAAGGAGTGATTTGCAAGTCCCATCTTCCCCTTATTTCCCTACCTATGCACAAGGGCAAGGGCCACCCCCCATGGTTGCCGAGCGTTTCCAGAGTGTTATAAGTCAGCTTTTTCAATATAGAATAATTCGGTGTGGTGGAGCAGTTGATGACGATATGGCAAACATCATAGTTGCTCAGCTCCTGTACCTTGATGCTGTTGATCCTAACAAGGATATTGTCATGTATGTAAATTCTCCAGGAGGGTCAGTTACAGCTGGAATGGCAATATTTGATACAATGAGGCATATCCGACCTGATGTGTCTACTGTTTGTGTTGGATTAGCGGCTAGTATGGGAGCTTTTCTGCTGAGTGCAGGGACAAAAGGAAAGAGATACAGCTTGCCAAATTCAAGGATAATGATTCATCAACCGCTTGGTGGTGCTCAAGGAGGGCAAACTGACATAGATATTCAGGCTAATGAAATGCTGCATCACAAGGCAAATCTGAATGGATATCTCGCCTATCATACCGGCCAAAGTTTAGATAAGATCAACCAGGATACAGACCGTGACTTTTTCATGAGTGCAAAAGAAGCCAAGGAATATGGACTCATAGATGGAGTCATTATGAATCCTCTCAAAGCTCTCCAGCCATTAGAGGCTGCAGCAGAAGGTAAAGATCGGGCTAGTGTTTGA
Predicted protein sequences of Glyma.02g011800
>Glyma.02g011800.1.p sequence-type=predicted peptide transcript=Glyma.02g011800.1 locus=Glyma.02g011800 id=Glyma.02g011800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAHTSLFTPSSSLRFNPLLLTSTPSSSSSSRSNNLSFPALSSLALICRNLRKSVEDRKINKKSAVKAVYGDEFWTPERSSRPGIWSIRSDLQVPSSPYFPTYAQGQGPPPMVAERFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLDKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLEAAAEGKDRASV*

>Glyma.02g011800.2.p sequence-type=predicted peptide transcript=Glyma.02g011800.2 locus=Glyma.02g011800 id=Glyma.02g011800.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAHTSLFTPSSSLRFNPLLLTSTPSSSSSSRSNNLSFPALSRNLRKSVEDRKINKKSAVKAVYGDEFWTPERSSRPGIWSIRSDLQVPSSPYFPTYAQGQGPPPMVAERFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLDKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLEAAAEGKDRASV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo