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Report for Sequence Feature Glyma.02g011100

Feature Type:gene_model
Chromosome:Gm02
Start:1047224
stop:1055040
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.02g011100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G62370.1AT heme binding JGI N/AIEA
GO:0020037GO-mf heme binding EnsemblGenomesN/AIEA
GO:0020037GO-mf heme binding JGI N/AIEA
PF09459PFAM Ethylbenzene dehydrogenase JGI N/AIEA

Expression Patterns of Glyma.02g011100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.02g011100
ParalogEvidenceComments
Glyma.10g011700 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.02g011100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g01450 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.02g011100
>Glyma.02g011100.2 sequence-type=transcript locus=Glyma.02g011100 ID=Glyma.02g011100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GAGTCTTCACTCTATATTTATTTATTAAAGTAAGAGAACATCAGGCACTTAATTCTTTGGAGAAGATGCTCTGGATAGATGACAAGGGCAGGTGGGGTGTTTAACGTGTATATTTCATTTCACGGTTGGGTAAAGGCAGAATGAAAGTGCAGGCGAAAAGGGGGAAAACAAATTGGCTAGTGCTGTGCGTCACGTCTAATATCTTAGTTTGTCTGATCTAATCTAAATTTTCTCGCAAACAGAAGAAAAGTCAAGCGCGGCACGAATCGCGAtctttccttctttctttctttcgttccttcACAATCCTACCAGCCGCCAAGCCGCAGAGTCAACTTGTACAAATGCCCACCGAATCCATTAAAACTAAAAAATCTTCTACCACGAACACTTGTCTTCATTCTTCAACCTTCGTTTCGTTTCTACCACTCCATTCCAGAATGCTTCGTTACCTGTTGGTGTTCTTCTTATTGGGCTTGGGAACCCGGGTGGAGTCACACGAGGAATCGGGTCATTGGAGCTGcgagtccgagtcggagatccgagtcgagactgagtTCAAACCCGGTGTAATCACACTGGATGGTCACGCTGATGATTGGAAGGACATTGATGGGTCCTACTTTCCCCTCCTTCCCGCCCTTGACCCAGATGCTGAAAATGAATTCAAAGGGGGAAAGATGAGCGTTAAAAGTGTCCATGATGGCCGCGATATCTTCTTTCTGCTGCAAGTAGATGGTGACTATGCCTACTCTAAAGGTGAAAGCAATAAATGTCCATCTGTTGCTCTCATGTTTCAAATTGGAGATAGTGCCTCTTATCATGATATGGGTGGCTGTAAAGAACATTCGACCTCATGCACTGACAAGACCTGCAAAGGTCATGAAGTTGACATTATGCACTTTTCGATAGGAAGTGCTATTCCAGGACGACTTTACGGTGGCAATCCCCTAGACAATAGAGATGGGAATGGTGGCGATAGGTTTGGTCACTTGGTTGATCTATATGCTTGGAATCCACATTGTAGATACTTGGATGGAATTGGTCCTCCAGGTTCTGCTAATGATTCAAGTGCGCAGAATGACTGGAAAGGTGCTTGGTGGCATAGCAGCTTCACAGTTCACTCAGGATTCGTAGAGGATGAGAGTCCATATGCAGATAATGGAAAAAAGGGCACATACTTTTTTGAATTCTCGAGGTCTTTGAGGACTATGGATCATCTTCAACAGGTTGGAACTTAGAAAGTAATTTGATATTCATAAGTTTTATAGGCTAAGAGTTTGCATTGATTTTTTCAGATTTTTTTCCCAATTAGCTGAATTTTTTGTTCACAAGTTCTTTTTCGATTAATTTTTGGGATCATTTGTAAATCTAATGGATTGTGGATGAAAAAACATATGAAATTATTTATCAATTTTAATCAATGTTGGCGTAGAG

>Glyma.02g011100.3 sequence-type=transcript locus=Glyma.02g011100 ID=Glyma.02g011100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GAGTCTTCACTCTATATTTATTTATTAAAGTAAGAGAACATCAGGCACTTAATTCTTTGGAGAAGATGCTCTGGATAGATGACAAGGGCAGGTGGGGTGTTTAACGTGTATATTTCATTTCACGGTTGGGTAAAGGCAGAATGAAAGTGCAGGCGAAAAGGGGGAAAACAAATTGGCTAGTGCTGTGCGTCACGTCTAATATCTTAGTTTGTCTGATCTAATCTAAATTTTCTCGCAAACAGAAGAAAAGTCAAGCGCGGCACGAATCGCGAtctttccttctttctttctttcgttccttcACAATCCTACCAGCCGCCAAGCCGCAGAGTCAACTTGTACAAATGCCCACCGAATCCATTAAAACTAAAAAATCTTCTACCACGAACACTTGTCTTCATTCTTCAACCTTCGTTTCGTTTCTACCACTCCATTCCAGAATGCTTCGTTACCTGTTGGTGTTCTTCTTATTGGGCTTGGGAACCCGGGTGGAGTCACACGAGGAATCGGGTCATTGGAGCTGcgagtccgagtcggagatccgagtcgagactgagtTCAAACCCGGTGTAATCACACTGGATGGTCACGCTGATGATTGGAAGGACATTGATGGGTCCTACTTTCCCCTCCTTCCCGCCCTTGACCCAGATGCTGAAAATGAATTCAAAGGGGGAAAGATGAGCGTTAAAAGTGTCCATGATGGCCGCGATATCTTCTTTCTGCTGCAAGTAGATGGTGACTATGCCTACTCTAAAGGTGAAAGCAATAAATGTCCATCTGTTGCTCTCATGTTTCAAATTGGAGATAGTGCCTCTTATCATGATATGGGTGGCTGTAAAGAACATTCGACCTCATGCACTGACAAGACCTGCAAAGGTCATGAAGTTGACATTATGCACTTTTCGATAGGAAGTGCTATTCCAGGACGACTTTACGGTGGCAATCCCCTAGACAATAGAGATGGGAATGGTGGCGATAGGTTTGGTCACTTGGTTGATCTATATGCTTGGAATCCACATTGTAGATACTTGGATGGAATTGGTCCTCCAGGTTCTGGCACATAATGTTACTCCTCCTTTGAATTATGGATCTGCCACCTTCATGAACTTACCTGTCAAAGTCCCAGTATTCTAAGTAGCAAAAAGCTTTGAACTTCTTTATCCACATCCATTCAAGAAATTGTGAGGACTC

>Glyma.02g011100.4 sequence-type=transcript locus=Glyma.02g011100 ID=Glyma.02g011100.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
GAGTCTTCACTCTATATTTATTTATTAAAGTAAGAGAACATCAGGCACTTAATTCTTTGGAGAAGATGCTCTGGATAGATGACAAGGGCAGGTGGGGTGTTTAACGTGTATATTTCATTTCACGGTTGGGTAAAGGCAGAATGAAAGTGCAGGCGAAAAGGGGGAAAACAAATTGGCTAGTGCTGTGCGTCACGTCTAATATCTTAGTTTGTCTGATCTAATCTAAATTTTCTCGCAAACAGAAGAAAAGTCAAGCGCGGCACGAATCGCGAtctttccttctttctttctttcgttccttcACAATCCTACCAGCCGCCAAGCCGCAGAGTCAACTTGTACAAATGCCCACCGAATCCATTAAAACTAAAAAATCTTCTACCACGAACACTTGTCTTCATTCTTCAACCTTCGTTTCGTTTCTACCACTCCATTCCAGAATGCTTCGTTACCTGTTGGTGTTCTTCTTATTGGGCTTGGGAACCCGGGTGGAGTCACACGAGGAATCGGGTCATTGGAGCTGcgagtccgagtcggagatccgagtcgagactgagtTCAAACCCGGTGTAATCACACTGGATGGTCACGCTGATGATTGGAAGGACATTGATGGGTCCTACTTTCCCCTCCTTCCCGCCCTTGACCCAGATGCTGAAAATGAATTCAAAGGGGGAAAGATGAGCGTTAAAAGTGTCCATGATGGCCGCGATATCTTCTTTCTGCTGCAAGTAGATGGTGACTATGCCTACTCTAAAGGTGAAAGCAATAAATGTCCATCTGTTGCTCTCATGTTTCAAATTGGAGATAGTGCCTCTTATCATGATATGGGTGGCTGTAAAGAACATTCGACCTCATGCACTGACAAGACCTGCAAAGGTCATGAAGTTGACATTATGCACTTTTCGATAGGAAGTGCTATTCCAGGACGACTTTACGGTGGCAATCCCCTAGACAATAGAGATGGGAATGGTGGCGATAGGTTATGAGCTGAAAAATTCCTTGACTTTCAATTATGATAGTCGTGGGCTATCTTATTTGTTGGT
Coding sequences of Glyma.02g011100
>Glyma.02g011100.1 sequence-type=CDS polypeptide=Glyma.02g011100.1.p locus=Glyma.02g011100 ID=Glyma.02g011100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCCACCGAATCCATTAAAACTAAAAAATCTTCTACCACGAACACTTGTCTTCATTCTTCAACCTTCGTTTCGTTTCTACCACTCCATTCCAGAATGCTTCGTTACCTGTTGGTGTTCTTCTTATTGGGCTTGGGAACCCGGGTGGAGTCACACGAGGAATCGGGTCATTGGAGCTGCGAGTCCGAGTCGGAGATCCGAGTCGAGACTGAGTTCAAACCCGGTGTAATCACACTGGATGGTCACGCTGATGATTGGAAGGACATTGATGGGTCCTACTTTCCCCTCCTTCCCGCCCTTGACCCAGATGCTGAAAATGAATTCAAAGGGGGAAAGATGAGCGTTAAAAGTGTCCATGATGGCCGCGATATCTTCTTTCTGCTGCAAGTAGATGGTGACTATGCCTACTCTAAAGGTGAAAGCAATAAATGTCCATCTGTTGCTCTCATGTTTCAAATTGGAGATAGTGCCTCTTATCATGATATGGGTGGCTGTAAAGAACATTCGACCTCATGCACTGACAAGACCTGCAAAGGTCATGAAGTTGACATTATGCACTTTTCGATAGGAAGTGCTATTCCAGGACGACTTTACGGTGGCAATCCCCTAGACAATAGAGATGGGAATGGTGGCGATAGGTTTGGTCACTTGGTTGATCTATATGCTTGGAATCCACATTGTAGATACTTGGATGGAATTGGTCCTCCAGGTTCTGCTAATGATTCAAGTGCGCAGAATGACTGGAAAGGTGCTTGGTGGCATAGCAGCTTCACAGTTCACTCAGGATTCGTAGAGGATGAGAGTCCATATGCAGATAATGGAAAAAAGGGCACATACTTTTTTGAATTCTCGAGGTCTTTGAGGACTATGGATCATCTTCAACAGGACGTGCAATTTAACATTGGTGGATCCAGTAAGATGTCTGTTGCATTCTGGTATCCAGTAGATGGTCAACCTTGGCATGGTTCTGGGCACTACTCTGTTTACTGTGATTGGGTTCCCATTGACATATCTGTTGGTAAATCTTTGAATGGCAAGTCAGTAGATGCAGCATCAAATAGCTCGTGGAATGTTGCTAGTGCCTTTTCTGTTATACTATCAGTAGCAGCACTTTGTGTGTCTGTTTTTGTGAGCTATAGGGTGTTCAGCCCCAAGAGTGTCTCTTTTACACCGATAGAGAACAACAACCTTTAA

>Glyma.02g011100.2 sequence-type=CDS polypeptide=Glyma.02g011100.2.p locus=Glyma.02g011100 ID=Glyma.02g011100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCCACCGAATCCATTAAAACTAAAAAATCTTCTACCACGAACACTTGTCTTCATTCTTCAACCTTCGTTTCGTTTCTACCACTCCATTCCAGAATGCTTCGTTACCTGTTGGTGTTCTTCTTATTGGGCTTGGGAACCCGGGTGGAGTCACACGAGGAATCGGGTCATTGGAGCTGCGAGTCCGAGTCGGAGATCCGAGTCGAGACTGAGTTCAAACCCGGTGTAATCACACTGGATGGTCACGCTGATGATTGGAAGGACATTGATGGGTCCTACTTTCCCCTCCTTCCCGCCCTTGACCCAGATGCTGAAAATGAATTCAAAGGGGGAAAGATGAGCGTTAAAAGTGTCCATGATGGCCGCGATATCTTCTTTCTGCTGCAAGTAGATGGTGACTATGCCTACTCTAAAGGTGAAAGCAATAAATGTCCATCTGTTGCTCTCATGTTTCAAATTGGAGATAGTGCCTCTTATCATGATATGGGTGGCTGTAAAGAACATTCGACCTCATGCACTGACAAGACCTGCAAAGGTCATGAAGTTGACATTATGCACTTTTCGATAGGAAGTGCTATTCCAGGACGACTTTACGGTGGCAATCCCCTAGACAATAGAGATGGGAATGGTGGCGATAGGTTTGGTCACTTGGTTGATCTATATGCTTGGAATCCACATTGTAGATACTTGGATGGAATTGGTCCTCCAGGTTCTGCTAATGATTCAAGTGCGCAGAATGACTGGAAAGGTGCTTGGTGGCATAGCAGCTTCACAGTTCACTCAGGATTCGTAGAGGATGAGAGTCCATATGCAGATAATGGAAAAAAGGGCACATACTTTTTTGAATTCTCGAGGTCTTTGAGGACTATGGATCATCTTCAACAGGTTGGAACTTAG

>Glyma.02g011100.3 sequence-type=CDS polypeptide=Glyma.02g011100.3.p locus=Glyma.02g011100 ID=Glyma.02g011100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCCACCGAATCCATTAAAACTAAAAAATCTTCTACCACGAACACTTGTCTTCATTCTTCAACCTTCGTTTCGTTTCTACCACTCCATTCCAGAATGCTTCGTTACCTGTTGGTGTTCTTCTTATTGGGCTTGGGAACCCGGGTGGAGTCACACGAGGAATCGGGTCATTGGAGCTGCGAGTCCGAGTCGGAGATCCGAGTCGAGACTGAGTTCAAACCCGGTGTAATCACACTGGATGGTCACGCTGATGATTGGAAGGACATTGATGGGTCCTACTTTCCCCTCCTTCCCGCCCTTGACCCAGATGCTGAAAATGAATTCAAAGGGGGAAAGATGAGCGTTAAAAGTGTCCATGATGGCCGCGATATCTTCTTTCTGCTGCAAGTAGATGGTGACTATGCCTACTCTAAAGGTGAAAGCAATAAATGTCCATCTGTTGCTCTCATGTTTCAAATTGGAGATAGTGCCTCTTATCATGATATGGGTGGCTGTAAAGAACATTCGACCTCATGCACTGACAAGACCTGCAAAGGTCATGAAGTTGACATTATGCACTTTTCGATAGGAAGTGCTATTCCAGGACGACTTTACGGTGGCAATCCCCTAGACAATAGAGATGGGAATGGTGGCGATAGGTTTGGTCACTTGGTTGATCTATATGCTTGGAATCCACATTGTAGATACTTGGATGGAATTGGTCCTCCAGGTTCTGGCACATAA

>Glyma.02g011100.4 sequence-type=CDS polypeptide=Glyma.02g011100.4.p locus=Glyma.02g011100 ID=Glyma.02g011100.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCCACCGAATCCATTAAAACTAAAAAATCTTCTACCACGAACACTTGTCTTCATTCTTCAACCTTCGTTTCGTTTCTACCACTCCATTCCAGAATGCTTCGTTACCTGTTGGTGTTCTTCTTATTGGGCTTGGGAACCCGGGTGGAGTCACACGAGGAATCGGGTCATTGGAGCTGCGAGTCCGAGTCGGAGATCCGAGTCGAGACTGAGTTCAAACCCGGTGTAATCACACTGGATGGTCACGCTGATGATTGGAAGGACATTGATGGGTCCTACTTTCCCCTCCTTCCCGCCCTTGACCCAGATGCTGAAAATGAATTCAAAGGGGGAAAGATGAGCGTTAAAAGTGTCCATGATGGCCGCGATATCTTCTTTCTGCTGCAAGTAGATGGTGACTATGCCTACTCTAAAGGTGAAAGCAATAAATGTCCATCTGTTGCTCTCATGTTTCAAATTGGAGATAGTGCCTCTTATCATGATATGGGTGGCTGTAAAGAACATTCGACCTCATGCACTGACAAGACCTGCAAAGGTCATGAAGTTGACATTATGCACTTTTCGATAGGAAGTGCTATTCCAGGACGACTTTACGGTGGCAATCCCCTAGACAATAGAGATGGGAATGGTGGCGATAGGTTATGA
Predicted protein sequences of Glyma.02g011100
>Glyma.02g011100.1.p sequence-type=predicted peptide transcript=Glyma.02g011100.1 locus=Glyma.02g011100 ID=Glyma.02g011100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPTESIKTKKSSTTNTCLHSSTFVSFLPLHSRMLRYLLVFFLLGLGTRVESHEESGHWSCESESEIRVETEFKPGVITLDGHADDWKDIDGSYFPLLPALDPDAENEFKGGKMSVKSVHDGRDIFFLLQVDGDYAYSKGESNKCPSVALMFQIGDSASYHDMGGCKEHSTSCTDKTCKGHEVDIMHFSIGSAIPGRLYGGNPLDNRDGNGGDRFGHLVDLYAWNPHCRYLDGIGPPGSANDSSAQNDWKGAWWHSSFTVHSGFVEDESPYADNGKKGTYFFEFSRSLRTMDHLQQDVQFNIGGSSKMSVAFWYPVDGQPWHGSGHYSVYCDWVPIDISVGKSLNGKSVDAASNSSWNVASAFSVILSVAALCVSVFVSYRVFSPKSVSFTPIENNNL*

>Glyma.02g011100.2.p sequence-type=predicted peptide transcript=Glyma.02g011100.2 locus=Glyma.02g011100 ID=Glyma.02g011100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPTESIKTKKSSTTNTCLHSSTFVSFLPLHSRMLRYLLVFFLLGLGTRVESHEESGHWSCESESEIRVETEFKPGVITLDGHADDWKDIDGSYFPLLPALDPDAENEFKGGKMSVKSVHDGRDIFFLLQVDGDYAYSKGESNKCPSVALMFQIGDSASYHDMGGCKEHSTSCTDKTCKGHEVDIMHFSIGSAIPGRLYGGNPLDNRDGNGGDRFGHLVDLYAWNPHCRYLDGIGPPGSANDSSAQNDWKGAWWHSSFTVHSGFVEDESPYADNGKKGTYFFEFSRSLRTMDHLQQVGT*

>Glyma.02g011100.3.p sequence-type=predicted peptide transcript=Glyma.02g011100.3 locus=Glyma.02g011100 ID=Glyma.02g011100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPTESIKTKKSSTTNTCLHSSTFVSFLPLHSRMLRYLLVFFLLGLGTRVESHEESGHWSCESESEIRVETEFKPGVITLDGHADDWKDIDGSYFPLLPALDPDAENEFKGGKMSVKSVHDGRDIFFLLQVDGDYAYSKGESNKCPSVALMFQIGDSASYHDMGGCKEHSTSCTDKTCKGHEVDIMHFSIGSAIPGRLYGGNPLDNRDGNGGDRFGHLVDLYAWNPHCRYLDGIGPPGSGT*

>Glyma.02g011100.4.p sequence-type=predicted peptide transcript=Glyma.02g011100.4 locus=Glyma.02g011100 ID=Glyma.02g011100.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPTESIKTKKSSTTNTCLHSSTFVSFLPLHSRMLRYLLVFFLLGLGTRVESHEESGHWSCESESEIRVETEFKPGVITLDGHADDWKDIDGSYFPLLPALDPDAENEFKGGKMSVKSVHDGRDIFFLLQVDGDYAYSKGESNKCPSVALMFQIGDSASYHDMGGCKEHSTSCTDKTCKGHEVDIMHFSIGSAIPGRLYGGNPLDNRDGNGGDRL*






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