SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g009300

Feature Type:gene_model
Chromosome:Gm02
Start:913374
stop:916116
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g009300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G02460.1AT JGI N/AIEA
3.2.1.15EC endo-polygalacturonase JGI N/AIEA
GO:0005975GO-bp carbohydrate metabolic process JGI N/AIEA
GO:0004650GO-mf polygalacturonase activity JGI N/AIEA
PTHR31375PantherFam FAMILY NOT NAMED JGI N/AIEA
PTHR31375:SF43PantherFam PROTEIN, PUTATIVE-RELATED JGI N/AIEA
PF00295Pfam Glycosyl hydrolases family 28 JGI N/AIEA

Gene model name correspondences to Glyma.02g009300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g01230 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g009300
>Glyma.02g009300.1 sequence-type=CDS polypeptide=Glyma.02g009300.1.p locus=Glyma.02g009300 id=Glyma.02g009300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGGCATTCTCATATTTTGACACTAGCATTGTCCTTATATTTTCTTGCTTTATTTCTTCCCACCCAAGCTAGGCACCATTACCACAAAAAACACAAGCACTCATATTATCATAATGCACCTGAAATTTCACCATCTCCTGCTCCTGCACCTTCTAATGCTCCTGATGATGCTTCTAGTCCTAGCCCCTCTGGTAACGAGAACTACCACAATGCATCCAGTAACTTATTCGATGTACGAACATTTGGGGCCATTGGAGATGGAATAACTGATGATACAGAGTCATTCAAGATGGCATGGGACACTGCTTGCGAAAGTGAATCACCGGTCAAAGTTATCCTTGTTCCCCAAGGTTTCTCCTTCGTTATTCAATCTACTATTTTCACAGGTCCTTGTAAAGGTGGCTTAGTACTAAAGGTTGATGGCACTCTTATGCCACCTGATGGACCTGAATCTTGGCCAAAGAACAACAGCAAGCGTCAATGGCTTGTCTTTTATAGAATCAATGGGATGTCACTTGAAGGAAGTGGTTTAATAGATGGGAGAGGAGCAAAATGGTGGGACCTTCCTTGTAAGCCTCATAAGGGACCTAATGGAACAACATCTCCAGGACCTTGTGACAGCCCAGTTGCCATAAGGTTTTTCATGAGTTCCAACTTGACTGTACAAGGATTGAGGATCAAGAACAGCCCCCAATTCCATTTCAGATTTGATGGCTGCGAAAGTGTCCACGTGGAATCAATTTACATAACCGCTCCAGCGCTAAGCCCCAACACTGATGGAATACACATAGAAAATACCAATGACGTGAGAATATACAATTCAGTCATTTCTAATGGTGATGACTGCGTGTCCATTGGAGCTGGTTGCCATGATGTTGATATAAAGAACATCACCTGTGGACCTGGTCATGGAATTAGCATTGGTAGTCTGGGAAATCACAACTCTAGAGCCTGTGTTTCAAACATTACGGTGAGGGACTCGGTTATAAAAGTGGCAGATAATGGGGTTAGAATCAAGACATGGCAAGGTGGATCAGGATCAGTATCTGGTGTGACATTCAGTAACATTCACATGGAAAGTGTAAGGAACCCTATTATAATTGACCAGTTTTACTGCCTTAGTAAGGATTGCTCCAACAAGACCTCTGCAGTCTTTGTAACGGATATAGTTTACACAAACATAAAGGGTACATATGACATAAGGCATCCACCAATGCGTTTTGCTTGCAGTGACTCTGTACCATGCACCAACTTGACCCTCTCAGATATTGAGCTTCTTCCTGCTCAAGGAAACATAGTGCTCGATCCTTTCTGCTGGAGTGCCTATGGAAACTCTGAGACACTAACAATTCCCCCAGTCTTTTGCATGCTGGAAGGCCTTCCTCAGTCCATTTCAGGCAATGACATAGATCATTGCTGA
Predicted protein sequences of Glyma.02g009300
>Glyma.02g009300.1.p sequence-type=predicted peptide transcript=Glyma.02g009300.1 locus=Glyma.02g009300 id=Glyma.02g009300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRHSHILTLALSLYFLALFLPTQARHHYHKKHKHSYYHNAPEISPSPAPAPSNAPDDASSPSPSGNENYHNASSNLFDVRTFGAIGDGITDDTESFKMAWDTACESESPVKVILVPQGFSFVIQSTIFTGPCKGGLVLKVDGTLMPPDGPESWPKNNSKRQWLVFYRINGMSLEGSGLIDGRGAKWWDLPCKPHKGPNGTTSPGPCDSPVAIRFFMSSNLTVQGLRIKNSPQFHFRFDGCESVHVESIYITAPALSPNTDGIHIENTNDVRIYNSVISNGDDCVSIGAGCHDVDIKNITCGPGHGISIGSLGNHNSRACVSNITVRDSVIKVADNGVRIKTWQGGSGSVSGVTFSNIHMESVRNPIIIDQFYCLSKDCSNKTSAVFVTDIVYTNIKGTYDIRHPPMRFACSDSVPCTNLTLSDIELLPAQGNIVLDPFCWSAYGNSETLTIPPVFCMLEGLPQSISGNDIDHC*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo