Report for Sequence Feature Glyma.02g008800
| Feature Type: | gene_model |
| Chromosome: | Gm02 |
| Start: | 882733 |
| stop: | 884178 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
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Annotations for Glyma.02g008800
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT3G15580.1 | AT |
APG8H,ATG8I |
JGI | N/A | IEA |
| GO:0000045 | GO-bp |
autophagosome assembly |
JGI | N/A | IEA |
| GO:0005737 | GO-cc |
cytoplasm |
JGI | N/A | IEA |
| K08341 | KEGG |
Mitochondrial biogenesis |
JGI | N/A | IEA |
| KOG1654 |
KOG |
Microtubule-associated anchor protein involved in autophagy and membrane trafficking |
JGI | N/A | IEA |
| PTHR10969 | PantherFam |
MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED |
JGI | N/A | IEA |
| PTHR10969:SF25 | PantherFam |
AUTOPHAGY-RELATED PROTEIN 8H |
JGI | N/A | IEA |
| PF04110 | Pfam |
Ubiquitin-like autophagy protein Apg12 |
JGI | N/A | IEA |
Proteins Associated with Glyma.02g008800
| Locus | Gene Symbol | Protein Name |
|---|
| | ATG8i | autophagy-related protein 8i |
Gene model name correspondences to Glyma.02g008800 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma02g01180 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.02g008800
>Glyma.02g008800.1 sequence-type=CDS polypeptide=Glyma.02g008800.1.p locus=Glyma.02g008800 id=Glyma.02g008800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGAGGAAGTTCGAGCTTCAGGGATGAGTATACCTTGGAACAAAGGCTCGGAGAATCGCGGGATATTGTGGCCAAATATCCCGATCGAGTCCCCGTGATTGTGGAAAGATATGCGAAATGCGATCTGCCTGAGTTGGAGAAGAAAAAATACCTTGTTCCTCGAGACTTGTCTGTTGGGCATTTCATTCATATTTTGAGTTCCAGACTTAGTCTGCCCCCTGGGAAAGCTCTCTTTGTATTTGTGAAGAATACCTTGCCTCAAACTGCTAATATGATGGACTCTGTGTATAGATCATTCAAGGATGAGGATGGATTTCTTTACATGTATTATAGCACCGAAAAAACCTTTGGTTCGTACATCATGTAA
>Glyma.02g008800.2 sequence-type=CDS polypeptide=Glyma.02g008800.2.p locus=Glyma.02g008800 id=Glyma.02g008800.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTTTCCGTAACCCTAAATTGGTCATTTTATGATTCGATTCTTCTTCTTTACCTTCTGCAGGTGATTGTGGAAAGATATGCGAAATGCGATCTGCCTGAGTTGGAGAAGAAAAAATACCTTGTTCCTCGAGACTTGTCTGTTGGGCATTTCATTCATATTTTGAGTTCCAGACTTAGTCTGCCCCCTGGGAAAGCTCTCTTTGTATTTGTGAAGAATACCTTGCCTCAAACTGCTAATATGATGGACTCTGTGTATAGATCATTCAAGGATGAGGATGGATTTCTTTACATGTATTATAGCACCGAAAAAACCTTTGGTTCGTACATCATGTAA
Predicted protein sequences of Glyma.02g008800
>Glyma.02g008800.1.p sequence-type=predicted peptide transcript=Glyma.02g008800.1 locus=Glyma.02g008800 id=Glyma.02g008800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGGSSSFRDEYTLEQRLGESRDIVAKYPDRVPVIVERYAKCDLPELEKKKYLVPRDLSVGHFIHILSSRLSLPPGKALFVFVKNTLPQTANMMDSVYRSFKDEDGFLYMYYSTEKTFGSYIM*
>Glyma.02g008800.2.p sequence-type=predicted peptide transcript=Glyma.02g008800.2 locus=Glyma.02g008800 id=Glyma.02g008800.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLSVTLNWSFYDSILLLYLLQVIVERYAKCDLPELEKKKYLVPRDLSVGHFIHILSSRLSLPPGKALFVFVKNTLPQTANMMDSVYRSFKDEDGFLYMYYSTEKTFGSYIM*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
