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Report for Sequence Feature Glyma.02g006000

Feature Type:gene_model
Chromosome:Gm02
Start:652960
stop:658599
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g006000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G39840.1AT TOPP4 JGI N/AIEA
3.1.3.16EC protein-serine/threonine phosphatase JGI N/AIEA
GO:0016787GO-mf hydrolase activity JGI N/AIEA
K06269KEGG Spliceosome JGI N/AIEA
PTHR11668PantherFam SERINE/THREONINE PROTEIN PHOSPHATASE JGI N/AIEA
PF00149Pfam Calcineurin-like phosphoesterase JGI N/AIEA
PF16891Pfam Serine-threonine protein phosphatase N-terminal domain JGI N/AIEA

Proteins Associated with Glyma.02g006000
LocusGene SymbolProtein Name
TOPP1 TOPP-type protein phosphatase gene 1

Gene model name correspondences to Glyma.02g006000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g00850 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g006000
>Glyma.02g006000.1 sequence-type=CDS polypeptide=Glyma.02g006000.1.p locus=Glyma.02g006000 id=Glyma.02g006000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAACGTGGGGTTCTTGATGGTATCATCAGTCGGCTGCTTCAAGTCAGAGTGAGACCTGGGAAACAGGTTCAGCTTTCAGAGGCAGAAATCAGGCAGCTTTGTGCGGTTTCCAGAGATATCTTTTTGAAGCAGCCCAATCTGTTGGAACTGGAACCACCAATTAAGATATGTGGAGACATCCATGGTCAATATTCTGACCTTCTGAGACTTTTTGAGCATGGTGGATTGCCTCCTCGCTCCAACTACTTATTCTTAGGCGATTATGTCGACCGTGGAAAGCAAAGCCTTGAGACAATATGTCTTCTTTTGGCATACAAGATAAAGTACCCTGAGAACTTCTTCCTCCTTAGAGGCAATCATGAATGTGCTTCCATAAACCGCGTCTACGGCTTCTACGACGAATGTAAACGGCGATTCAACGTCAGGCTATGGAAAATATTTGCAGATTGCTTCAACTGCATGCCTGTGGCAGCTATCATTGAGGAAAAGATTTTCTGTATGCATGGTGGACTCTCTCCAGAATTGCACAATCTAAGTCAGATAAGTAGTTTGCCGCGTCCAACCGAAGTACCCGAGAGTGGTCTACTATGTGATCTCTTGTGGTCTGATCCTAGTAAAGACATTGAGGGTTGGGGAGACAATGAGCGCGGAGTTTCTTATACTTTTGGTGCTAGCAGGGTGACAGAATTTCTTGGAAAGCATGATCTTGACCTGATTTGTAGAGCACACCAGGTTGTTGAAGATGGATATGAATTTTTTTCCAATAGACAACTTGTGACTATCTTTTCTGCACCTAACTACTGTGGAGAATTTGACAATGCTGGAGCAATGATGACTGTTGATGAGACACTTATGTGCTCTTTTCAGATACTAAGGCCTGTGGAACACAGAAAGCCTAAGTTTGGTTTTGGGAGCAAAACTACATTCAAGGCAGTTCTTGATGCTGCTAGAGTATGA

>Glyma.02g006000.2 sequence-type=CDS polypeptide=Glyma.02g006000.2.p locus=Glyma.02g006000 id=Glyma.02g006000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAACGTGGGGTTCTTGATGGTATCATCAGTCGGCTGCTTCAAGTCAGAGTGAGACCTGGGAAACAGGTTCAGCTTTCAGAGGCAGAAATCAGGCAGCTTTGTGCGGTTTCCAGAGATATCTTTTTGAAGCAGCCCAATCTGTTGGAACTGGAACCACCAATTAAGATATGTGGAGACATCCATGGTCAATATTCTGACCTTCTGAGACTTTTTGAGCATGGTGGATTGCCTCCTCGCTCCAACTACTTATTCTTAGGCGATTATGTCGACCGTGGAAAGCAAAGCCTTGAGACAATATGTCTTCTTTTGGCATACAAGATAAAGTACCCTGAGAACTTCTTCCTCCTTAGAGGCAATCATGAATGTGCTTCCATAAACCGCGTCTACGGCTTCTACGACGAATGTAAACGGCGATTCAACGTCAGGCTATGGAAAATATTTGCAGATTGCTTCAACTGCATGCCTGTGGCAGCTATCATTGAGGAAAAGATTTTCTGTATGCATGGTGGACTCTCTCCAGAATTGCACAATCTAAGTCAGATAAGTAGTTTGCCGCGTCCAACCGAAGTACCCGAGAGTGGTCTACTATGTGATCTCTTGTGGTCTGATCCTAGTAAAGACATTGAGGGTTGGGGAGACAATGAGCGCGGAGTTTCTTATACTTTTGGTGCTAGCAGGGTGACAGAATTTCTTGGAAAGCATGATCTTGACCTGATTTGTAGAGCACACCAGGTTGTTGAAGATGGATATGAATTTTTTTCCAATAGACAACTTGTGACTATCTTTTCTGCACCTAACTACTGTGGAGAATTTGACAATGCTGGAGCAATGATGACTGTTGATGAGACACTTATGTGCTCTTTTCAGATACTAAGGCCTGTGGAACACAGAAAGCCTAAGTTTGGTTTTGGGAGCAAAACTACATTCAAGGCAGTTCTTGATGCTGCTAGAGTATGA
Predicted protein sequences of Glyma.02g006000
>Glyma.02g006000.1.p sequence-type=predicted peptide transcript=Glyma.02g006000.1 locus=Glyma.02g006000 id=Glyma.02g006000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MERGVLDGIISRLLQVRVRPGKQVQLSEAEIRQLCAVSRDIFLKQPNLLELEPPIKICGDIHGQYSDLLRLFEHGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRVYGFYDECKRRFNVRLWKIFADCFNCMPVAAIIEEKIFCMHGGLSPELHNLSQISSLPRPTEVPESGLLCDLLWSDPSKDIEGWGDNERGVSYTFGASRVTEFLGKHDLDLICRAHQVVEDGYEFFSNRQLVTIFSAPNYCGEFDNAGAMMTVDETLMCSFQILRPVEHRKPKFGFGSKTTFKAVLDAARV*

>Glyma.02g006000.2.p sequence-type=predicted peptide transcript=Glyma.02g006000.2 locus=Glyma.02g006000 id=Glyma.02g006000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MERGVLDGIISRLLQVRVRPGKQVQLSEAEIRQLCAVSRDIFLKQPNLLELEPPIKICGDIHGQYSDLLRLFEHGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRVYGFYDECKRRFNVRLWKIFADCFNCMPVAAIIEEKIFCMHGGLSPELHNLSQISSLPRPTEVPESGLLCDLLWSDPSKDIEGWGDNERGVSYTFGASRVTEFLGKHDLDLICRAHQVVEDGYEFFSNRQLVTIFSAPNYCGEFDNAGAMMTVDETLMCSFQILRPVEHRKPKFGFGSKTTFKAVLDAARV*






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