SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g002000

Feature Type:gene_model
Chromosome:Gm02
Start:237750
stop:243006
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g002000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G63410.1AT APG1,E37,IEP37,VTE3 JGI N/AIEA
2.1.1.295EC 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase JGI N/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0008168GO-mf methyltransferase activity JGI N/AIEA
K12502KEGG Ubiquinone and other terpenoid-quinone biosynthesis JGI N/AIEA
KOG1540 KOG Ubiquinone biosynthesis methyltransferase COQ5 JGI N/AIEA
PTHR10108PantherFam SAM-DEPENDENT METHYLTRANSFERASE JGI N/AIEA
PF08241Pfam Methyltransferase domain JGI N/AIEA

Gene model name correspondences to Glyma.02g002000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g00440 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g002000
>Glyma.02g002000.2 sequence-type=CDS polypeptide=Glyma.02g002000.2.p locus=Glyma.02g002000 id=Glyma.02g002000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCTCCTTAATGCTCAATGGAGCTCATCAAAATCCAAACCTCATTAGTGGCATAGCTCCAAATGGCCTTAACTTTCACAACAAGTGTTTATTCCAAAAGGGTGTGCTGTCTCATGGTAACAAGTTAAGGGTGGTCAGAAAAAACTTCACTCCCAAAGGCAGCATGTCAGCATCATCATCATCATCATCTAGGCCTGGTTCTCAGCCAAGGTTCATCCAGCACAAGAAGGAGGCATTTTGGTTCTACAGGTTTCTCTCTATTGTGTATGACCACATCATAAACCCGGGGCACTGGACCGAAGACATGAGAGACGAGGCACTGGAGCCTGCTGATCTCTACAACCGCAACCTGAGAGTGGTGGATGTTGGAGGTGGAACTGGCTTCACCACTCTTGGTATAGTGAAGCATGTGGACGCCAAAAACGTTACAATTCTCGACCAGTCGCCACACCAGCTCGCCAAGGCTAAGCAGAAGGAGCCCTTGAAAGAATGCAAGATTGTTGAAGGGGATGCTGAAGATCTTCCATTTCCAACTGATTATGCTGATAGATATGTTTCTGCTGGAAGTATTGAATACTGGCCAGATCCGCAGCGTGGCATTACGGAAGCATACAGAGTGCTAAGGATAGGAGGCATAGCTTGTGTGATTGGTCCTGTACACCCAACATTTTGGCTGTCTAGGTTCTTTGCAGATGTGTGGATGCTCTTCCCCAAGGAGGAAGAGTACATTGAATGGTTTAAGAAGGCTGGTTTCAAAGATGTTAAGCTCAAAAGGATTGGTCCAAAATGGTATCGTGGGGTGCGCAGGCACGGCCTTATCATGGGTTGCTCAGTCACAGGTGTGAAGCCTTTGTCTGGAGACTCTCCCCTCCAGCTTGGTCCCAAGGTAGAGGATGTAAAGAAGCCTGTAAATCCATTTGTGTTTCTTTATCGGTTCATTCTTGGTACAATTGCATCCACTTACTTCGTACTAGTGCCAATTTACATGTGGATCAAAGACAAAATTGTTCCAAGGGGCATGCCCATCTAA
Predicted protein sequences of Glyma.02g002000
>Glyma.02g002000.2.p sequence-type=predicted peptide transcript=Glyma.02g002000.2 locus=Glyma.02g002000 id=Glyma.02g002000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASLMLNGAHQNPNLISGIAPNGLNFHNKCLFQKGVLSHGNKLRVVRKNFTPKGSMSASSSSSSRPGSQPRFIQHKKEAFWFYRFLSIVYDHIINPGHWTEDMRDEALEPADLYNRNLRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGITEAYRVLRIGGIACVIGPVHPTFWLSRFFADVWMLFPKEEEYIEWFKKAGFKDVKLKRIGPKWYRGVRRHGLIMGCSVTGVKPLSGDSPLQLGPKVEDVKKPVNPFVFLYRFILGTIASTYFVLVPIYMWIKDKIVPRGMPI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo