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Integrating Genetics and Genomics to Advance Soybean Research


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Report for Sequence Feature Glyma.02G272300

Feature Type:gene_model
Chromosome:Gm02
Start:45614498
stop:45617536
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.02G272300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G04580.1AT aldehyde oxidase 4 JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
PTHR11908Panther XANTHINE DEHYDROGENASE JGI N/AIEA
PTHR11908:SF15Panther JGI N/AIEA
PF02738PFAM Molybdopterin-binding domain of aldehyde dehydrogenase JGI N/AIEA
GN7V-56996SoyCyc9-rxn aldehyde oxidase Plant Metabolic Network ISS

Expression Patterns of Glyma.02G272300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.02G272300 not represented in the dataset
Glyma.02G272300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.



Coding sequences of Glyma.02G272300
>Glyma.02g272300.1 sequence-type=CDS polypeptide=Glyma.02g272300.1.p locus=Glyma.02g272300 ID=Glyma.02g272300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGAAGTGCATAGAGAAGCGTGGAAAGGTTGCCACATCATGTGCACTGGCAGCAAAGAAATTACAGCACCCAGTTAGGATGTATCAAAATCGAAAGACGGATATGATAATGGCCGGAGGAAGGTACCCCATGAAGAAAACTTACAGTGTTGGGATTAGGAATGATGGTAAGATTACTGCACTAGACCTTCAGATATTGTTCAATGCAGGGATATATGTGGATATAAGTGCAATTATGCCACATAATATAGTTTGCGCACTTAAAAAATCTTCAATGAGGGGCCCTGGGGAGGTGCAGGGATCATTTACTGCTGAAGCTATTATAGAAAATGTTGCAGCTACACTTTCAATGGATGTAGATTCTGTCAGAAGCATTAATCTTCACACATACAAAAGTCTTCTTCAGTCATTCTCTGAGTACTATCATGGCGAACCTTACGAGTATACCTTGCCTTCAATATGGAGTAAGTTAGCTGTTTCTTCCAACTATGACCAGAGAAACAAAATGGTGCAAGATGGGTCAAGGTCTTTGGACAAAGGTGAAACAGATGGCTGCGTGTATGCTCTCGGTGCTATTCAATGTGATGGAACTGAAGGTCTCTTGGACAAAATATGGGTTGTACAATCTGATACGGTGAGCTTGATTCAAGGAGGCTTCACTGCTGGGAGCACTACATCAGAGTCAAGCTGTGAAGCAGTTAGGCTTTCCTGTAATGTCTTGGTAAAGAGGCTAAAGCCTCTTAAGGAAAAGCTGCAGGAGGAAATGGACTCTATCAAGTGGGAGACTCTTATTCTTCAGGCATACATGCAAGCTGTGAACTTATCAGCATCTTCATTTTATGTACCCAGTAATGACTCCTCGAGTTACCTTAACTATGGTGCTGCAGTAAGTGAGGTCGAAATAGATCTTCTGAATGGAGAAACCAGATTTCTGCAAACAGATATTATTTATGATTGTGGACAGAGTCTAAACCCTGCTGTGGATTTAGGACAGAATACGAAACAAATATTGATGGTTTGGAATTACAAAATCCCTACAATAGACACTATACCTAAACGGTTTACAATTCAAATCCTCAACAGTGGGTACCACTAG
Predicted protein sequences of Glyma.02G272300
>Glyma.02g272300.1.p sequence-type=predicted peptide transcript=Glyma.02g272300.1 locus=Glyma.02g272300 ID=Glyma.02g272300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQKCIEKRGKVATSCALAAKKLQHPVRMYQNRKTDMIMAGGRYPMKKTYSVGIRNDGKITALDLQILFNAGIYVDISAIMPHNIVCALKKSSMRGPGEVQGSFTAEAIIENVAATLSMDVDSVRSINLHTYKSLLQSFSEYYHGEPYEYTLPSIWSKLAVSSNYDQRNKMVQDGSRSLDKGETDGCVYALGAIQCDGTEGLLDKIWVVQSDTVSLIQGGFTAGSTTSESSCEAVRLSCNVLVKRLKPLKEKLQEEMDSIKWETLILQAYMQAVNLSASSFYVPSNDSSSYLNYGAAVSEVEIDLLNGETRFLQTDIIYDCGQSLNPAVDLGQNTKQILMVWNYKIPTIDTIPKRFTIQILNSGYH*






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