Glyma.02G208700

SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Warning: get_headers(): php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1018

Warning: get_headers(https://bar.utoronto.ca/api/efp_image/efp_soybean/soybean/Absolute/Glyma.02G208700): Failed to open stream: php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1018

Warning: Trying to access array offset on false in /var/www/html/include/SeqFeatClass.php on line 1019

Warning: get_headers(): php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1020

Warning: get_headers(https://bar.utoronto.ca/api/efp_image/efp_soybean/soybean_severin/Absolute/Glyma.02G208700): Failed to open stream: php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1020

Warning: Trying to access array offset on false in /var/www/html/include/SeqFeatClass.php on line 1021

Deprecated: preg_match(): Passing null to parameter #2 ($subject) of type string is deprecated in /var/www/html/include/SeqFeatClass.php on line 1025

Deprecated: preg_match(): Passing null to parameter #2 ($subject) of type string is deprecated in /var/www/html/include/SeqFeatClass.php on line 1031

Report for Sequence Feature Glyma.02G208700

Feature Type:	gene_model
Chromosome:	Gm02
Start:	39388574
stop:	39391014
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.02G208700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G78300.1	AT	general regulatory factor 2	JGI	N/A	IEA
AT4G09000.2	AT	general regulatory factor 1	JGI	N/A	IEA
GO:0019904	GO-mf	protein domain specific binding	EnsemblGenomes	N/A	IEA
KOG0841	KOG	Multifunctional chaperone (14-3-3 family)	JGI	N/A	IEA
PTHR18860	Panther	14-3-3 PROTEIN	JGI	N/A	IEA
PF00244	PFAM	14-3-3 protein	JGI	N/A	IEA

Proteins Associated with Glyma.02G208700

Locus	Gene Symbol	Protein Name
	SGF14G	14-3-3 protein SGF14g
	GF14c	GF14 gene family gene c

Expression Patterns of Glyma.02G208700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.02G208700 not represented in the dataset	Glyma.02G208700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.02G208700

Paralog	Evidence	Comments
Glyma.14g176900	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.02G208700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.02g208700	Wm82.a4.v1	ISS	As supplied by JGI
Glyma02g37120	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.02G208700

Limit To All Plant Sequences

>Glyma.02g208700.2 sequence-type=transcript locus=Glyma.02g208700 ID=Glyma.02g208700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTGGCAGAAACAGAAGCACAGCACCACGAACCAATCCCAGCCTTTCGGTTCCCCCACAAATAAAATAGTTACCACAACCCATTTGTTGCTTGCTGCGAGCGAAtccctctctctctttctctttctctctcATCCAGATCTTGCAAAAAAAAAAAAACACAATGGCAGCGAGCGCTCCCACTCCACGCGAAGAGTTCGTGTACATGGCGAAGCTGGCGGAGCAGGCCGAGCGCTACGAGGAGATGGTGGAGTTCATGGAGAAGGTCTCCGCCTCCGCCGAGAGCGAGGAGCTGACCGTGGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTAATCGGCGCTCGCCGCGCCTCCTGGCGCATCATCTCCTCCATTGAGCAGAAGGAGGAGAGCCGCGGCAACGAGGACCACGTCGCCGTCATCCGTGACTACCGCTCCAAGATCGAGGCCGAGCTCTCCAACATCTGCGACGGAATCCTCAAGCTCCTCGACACGCGCCTCGTCCCCTCCGCCGCCTCCGGCGACTCCAAGGTCTTCTACCTCAAGATGAAGGGAGACTACCACAGGTACCTCGCTGAGTTCAAGACCGGCGCCGACCGCAAGGAAGCCGCCGAGAGCACGCTCTCCGCCTACAAAGCCGCTCAGGACATTGCTAACACCGAGCTGCCTCCAACTCACCCTATCAGGCTGGGTCTTGCTCTGAATTTCTCTGTGTTTTACTATGAGATTCTTAACTCTCCTGATCGTGCATGCAGCCTTGCAAAACAGGCTTTTGATGAGGCTATTGCTGAATTGGATACGTTGGGAGAGGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTTACCCTCTGGACCTCTGACATGCAGGTATGGCTTTTGAGTTTTCCACCATAACTTTGGCATCTTATCCTCTTATTGTCTTTAGAAAATCTATTTATTGATTGCGGTTGTTATTTTTGTTGGGGTTTCAGGATGATGGTGCAGATGAAATTAAAGAAGCCGCACCCAAAGGTGACGGGGAACAAAATTAAACATACCATACTTCTAATTAGTGATTGAACTTCCCTTGTGTAATGTTTTCAAAGGGAGAAGGTGTTGAATGCTAATCTCGGTGTTACTGAGATTTTGGGCATTCATGTTCTTCGTTATGAATTGTGGATGTACTGGGCTATTTTAGTTTGTCCTTCCATTAGTACGCGTTTCTGAACTGCCTATTTTCATAATGACACTGAAATTTCCATTATAATGCTGTTTAGAATATTAAGATATTGTTCTCTAGCAAACTTGGTATTGCTAATTGTTTTAGCATGTGAAGGTGTGACACCTTTATTTGTTTTTATTCTAAAGCCTCGGAATCATTTATTCCGATCGATTTTAACGTGTTTTTGTTGTGAGGATTGTCAACTTCATTATGTTTGGGTGCATGGGGTTATGGAGAATTTGATATAAAAAGTATGATTTCTAATTTGC

Coding sequences of Glyma.02G208700

Limit To All Plant Sequences

>Glyma.02g208700.1 sequence-type=CDS polypeptide=Glyma.02g208700.1.p locus=Glyma.02g208700 ID=Glyma.02g208700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAGCGAGCGCTCCCACTCCACGCGAAGAGTTCGTGTACATGGCGAAGCTGGCGGAGCAGGCCGAGCGCTACGAGGAGATGGTGGAGTTCATGGAGAAGGTCTCCGCCTCCGCCGAGAGCGAGGAGCTGACCGTGGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTAATCGGCGCTCGCCGCGCCTCCTGGCGCATCATCTCCTCCATTGAGCAGAAGGAGGAGAGCCGCGGCAACGAGGACCACGTCGCCGTCATCCGTGACTACCGCTCCAAGATCGAGGCCGAGCTCTCCAACATCTGCGACGGAATCCTCAAGCTCCTCGACACGCGCCTCGTCCCCTCCGCCGCCTCCGGCGACTCCAAGGTCTTCTACCTCAAGATGAAGGGAGACTACCACAGGTACCTCGCTGAGTTCAAGACCGGCGCCGACCGCAAGGAAGCCGCCGAGAGCACGCTCTCCGCCTACAAAGCCGCTCAGGACATTGCTAACACCGAGCTGCCTCCAACTCACCCTATCAGGCTGGGTCTTGCTCTGAATTTCTCTGTGTTTTACTATGAGATTCTTAACTCTCCTGATCGTGCATGCAGCCTTGCAAAACAGGCTTTTGATGAGGCTATTGCTGAATTGGATACGTTGGGAGAGGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTTACCCTCTGGACCTCTGACATGCAGGATGATGGTGCAGATGAAATTAAAGAAGCCGCACCCAAAGGTGACGGGGAACAAAATTAA

>Glyma.02g208700.2 sequence-type=CDS polypeptide=Glyma.02g208700.2.p locus=Glyma.02g208700 ID=Glyma.02g208700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAGCGAGCGCTCCCACTCCACGCGAAGAGTTCGTGTACATGGCGAAGCTGGCGGAGCAGGCCGAGCGCTACGAGGAGATGGTGGAGTTCATGGAGAAGGTCTCCGCCTCCGCCGAGAGCGAGGAGCTGACCGTGGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTAATCGGCGCTCGCCGCGCCTCCTGGCGCATCATCTCCTCCATTGAGCAGAAGGAGGAGAGCCGCGGCAACGAGGACCACGTCGCCGTCATCCGTGACTACCGCTCCAAGATCGAGGCCGAGCTCTCCAACATCTGCGACGGAATCCTCAAGCTCCTCGACACGCGCCTCGTCCCCTCCGCCGCCTCCGGCGACTCCAAGGTCTTCTACCTCAAGATGAAGGGAGACTACCACAGGTACCTCGCTGAGTTCAAGACCGGCGCCGACCGCAAGGAAGCCGCCGAGAGCACGCTCTCCGCCTACAAAGCCGCTCAGGACATTGCTAACACCGAGCTGCCTCCAACTCACCCTATCAGGCTGGGTCTTGCTCTGAATTTCTCTGTGTTTTACTATGAGATTCTTAACTCTCCTGATCGTGCATGCAGCCTTGCAAAACAGGCTTTTGATGAGGCTATTGCTGAATTGGATACGTTGGGAGAGGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTTACCCTCTGGACCTCTGACATGCAGGTATGGCTTTTGAGTTTTCCACCATAA

Predicted protein sequences of Glyma.02G208700

Limit To All Plant Sequences

>Glyma.02g208700.1.p sequence-type=predicted peptide transcript=Glyma.02g208700.1 locus=Glyma.02g208700 ID=Glyma.02g208700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAASAPTPREEFVYMAKLAEQAERYEEMVEFMEKVSASAESEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIEAELSNICDGILKLLDTRLVPSAASGDSKVFYLKMKGDYHRYLAEFKTGADRKEAAESTLSAYKAAQDIANTELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKGDGEQN*

>Glyma.02g208700.2.p sequence-type=predicted peptide transcript=Glyma.02g208700.2 locus=Glyma.02g208700 ID=Glyma.02g208700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAASAPTPREEFVYMAKLAEQAERYEEMVEFMEKVSASAESEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIEAELSNICDGILKLLDTRLVPSAASGDSKVFYLKMKGDYHRYLAEFKTGADRKEAAESTLSAYKAAQDIANTELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQVWLLSFPP*

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain