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Integrating Genetics and Genomics to Advance Soybean Research


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Report for Sequence Feature Glyma.02G167200

Feature Type:gene_model
Chromosome:Gm02
Start:25607897
stop:25612881
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.02G167200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G17470.1AT Ca2+-activated RelA/spot homolog JGI N/AIEA
GO:0015969GO-bp guanosine tetraphosphate metabolic process EnsemblGenomesN/AIEA
GO:0015969GO-bp guanosine tetraphosphate metabolic process JGI N/AIEA
GO:0005509GO-mf calcium ion binding EnsemblGenomesN/AIEA
GO:0005509GO-mf calcium ion binding JGI N/AIEA
PTHR15239Panther UNCHARACTERIZED JGI N/AIEA
PF04607PFAM Region found in RelA / SpoT proteins JGI N/AIEA
GN7V-65243SoyCyc9-rxn GTP diphosphokinase Plant Metabolic Network ISS

Expression Patterns of Glyma.02G167200
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.02G167200 not represented in the dataset
Glyma.02G167200 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.



Coding sequences of Glyma.02G167200
>Glyma.02g167200.1 sequence-type=CDS polypeptide=Glyma.02g167200.1.p locus=Glyma.02g167200 ID=Glyma.02g167200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTAGAATTGATAGAATATAACTTGGAAGATGTGGATGCTGCTATATTAGTTGTTCGTGTAGCTCTTGCAAAGGGTATGAACTGGGATGACCTTGCTCGGATGGTGAAGGAAGAAAAGAAAGTTGGAAACCCAGTAGCTGGTCTCATTGATAAGCTTCATCTCGACAGGAACTGCATGACTTTACTGTTAAACAACAATCTTGATGAAATGGATGATGATGAGAAGACACTCCCTGTGGATAAGTCTTCTGGAAAATCAATCACGAAGGAAGAGACATCATCTGAAAATGATGCATTGGACAAAGGGAAAAAACCAGGCAGTGAGTTAAGAATTTTTTATGTTTTATATCCTATTATCCTGTTCAAACACTGCAGTTTTGTTTTGAGTTTGGATATGGCAGTTGAAGTGATTGAAAATGGTAAGACAAGACCATTGATGGAAATACAGATAAGAACAACTGAAATGGACAGGCTAGCAGTTGGTGGAATAGCTGCTCATTCATTATACAAGGCTGGCCTTACTGATCCTGAGGAGGCAAAGCGTCTGAAGACCATCATGTTGGCTGCAACTGAATTGACTACGCTGTGCCTTAAAGATTTTCTGACAAGTACAAATCATAAAGGAATTGAAATTGACCAGAGGGATAGAGCGTTTTGCCTTCTTGACAAGAACGGAGACGATAAAATTAGCATTGAGGAACTTACACAAGTGATGGAGGAGCTTGGTGCGCCAGGAGAAGATGCCCGAGAAATGATGCAGCTCCTTGACTCAAACAGTGATGACTCCCTCAGCTATGACGAATTTCATATGTTCCAAGAACAGGATATGAACGCGTTGAGGTATGATTTAATGGAGTTAAAGCCAACACTATTTGCTAGAGTCCCACGGGTTTTCGAAAAGAATATGTGTTTCAGGAATCAAGAAAGCAGTGGAAGAACTCAATCCAATGAGGAGAACAGTTTTTGGCATGCTCTACAACTAGCCGAGGCAGTTTTGCTAATTCATATTTTTTTCTTCAAATGCAGCAAACTTGGTTGGATGAAAAAAGGATACAAACATAGACAAGCATCACGTTTAGCTGATTTATTAGCCTTCAAAAAGCTAGGCTTGGGGTCGTGTTCGACTAATAATACTGGTGGGGTAGCCTTGAGCCCAGAGGTGGAAGAATTCTTGGGTGTCACTACTTGTGCCTTTCTATGGCAAGGCTATGTGAATCTTATTTTCAAACTAACAAAAGTTTCAACCAAGAAAAGAGACTTGATTAAAAAATATGTTATTAGTCGAGAAATTATTATATAG
Predicted protein sequences of Glyma.02G167200
>Glyma.02g167200.1.p sequence-type=predicted peptide transcript=Glyma.02g167200.1 locus=Glyma.02g167200 ID=Glyma.02g167200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVELIEYNLEDVDAAILVVRVALAKGMNWDDLARMVKEEKKVGNPVAGLIDKLHLDRNCMTLLLNNNLDEMDDDEKTLPVDKSSGKSITKEETSSENDALDKGKKPGSELRIFYVLYPIILFKHCSFVLSLDMAVEVIENGKTRPLMEIQIRTTEMDRLAVGGIAAHSLYKAGLTDPEEAKRLKTIMLAATELTTLCLKDFLTSTNHKGIEIDQRDRAFCLLDKNGDDKISIEELTQVMEELGAPGEDAREMMQLLDSNSDDSLSYDEFHMFQEQDMNALRYDLMELKPTLFARVPRVFEKNMCFRNQESSGRTQSNEENSFWHALQLAEAVLLIHIFFFKCSKLGWMKKGYKHRQASRLADLLAFKKLGLGSCSTNNTGGVALSPEVEEFLGVTTCAFLWQGYVNLIFKLTKVSTKKRDLIKKYVISREIII*






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