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Integrating Genetics and Genomics to Advance Soybean Research


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Report for Sequence Feature Glyma.02G148400

Feature Type:gene_model
Chromosome:Gm02
Start:15303512
stop:15305974
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.02G148400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G02860.1AT Phenazine biosynthesis PhzC/PhzF protein JGI N/AIEA
GO:0009058GO-bp biosynthetic process EnsemblGenomesN/AIEA
GO:0009058GO-bp biosynthetic process JGI N/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
KOG3033 KOG Predicted PhzC/PhzF-type epimerase JGI N/AIEA
PTHR13774Panther PHENAZINE BIOSYNTHESIS PROTEIN JGI N/AIEA
PTHR13774:SF12Panther JGI N/AIEA
PF02567PFAM Phenazine biosynthesis-like protein JGI N/AIEA
GN7V-65328SoyCyc9-rxn trans-2,3-dihydro-3-hydroxyanthranilate isomerase Plant Metabolic Network ISS

Expression Patterns of Glyma.02G148400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.02G148400 not represented in the dataset
Glyma.02G148400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.02G148400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.02g148400 Wm82.a4.v1ISS As supplied by JGI
Glyma02g16740 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.02G148400
>Glyma.02g148400.2 sequence-type=transcript locus=Glyma.02g148400 ID=Glyma.02g148400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACGTTGACTGCTTAAAAACGTATACATTATTTATGAAGCGATAAAAATCCAAATGAAACACGTTAGGTTGGTGGCGGTGAGTTGGAGCTTTGACCAGTTTGAGCACACGAGAATTCAGTGGGCATGTCAATGGCAAAAAAACCTGTGAAATACTCTCTGGTTGACGCGTTTACTGAGTCAGTGTTCAAAGGAAACCCTGCAGCAGTGTGTTTCTTAGAAGAGAAGAGGGACAAAAAGTGGTTGCAAGGAGTAGCTGCAGAGTTCAATCTATCTGTGACATGTTACTTAACTCGCATCACCGAGTCCCATGGAACAACCTCTTATCCTCGTTTTGATCTCAGATGGTTCACTCCTGTTAGTGAGATTAACCTTTGTGGACATGCGACCTTAGCTGCTGCGCACACAATATTTTCATCTGGTTTGGTGGACACCGATGTTGTCGAATTTGTGGCTATATCTGGAATATTAACTGCCAAAAAGATCCCAGCGATCAATATCACTAGTGCCTCAGACTTGCAAAAGGGTGAAGCTCAGGATGGGTTTTATGTTGAATTGAATTTCCCTGCTGATCCTGTTGTAGAATTCAATTTTGATGAGACTTCACAAATTTCTGGGGCATTGAACGGTGCTTCCATAATTGATATAAAGAGGACACAAGATGGAGGCGACTTAGTTGTTGTGGTCACTTCCGGAAGAGTTGTCGAGGAACTACAACCACAACTTGATGCAATAGTTAAATGTCCTGGAAGGGGGTTAATTGTTACGGGGATTGCTCCTCCAGGCTCAGAATTTGACTTCTGTAGTCGATTCTTCTGCCCAAAACTTGGAGTCAATGAGGATCCTGTTTGTGGGGGTGCACATTGTGCATTGGCACCCTACTGGAGCAAGAAGCTAGGGAAGTGTGATTTCAAAGCTTATCAGGCATCAGCCAGAGGGGGAGTTCTCAATGTTCATCTTGATGAGCAGAACCAAAGGGTGCTTTTGCGTGGGAAGGCTGTTAAAGTGATGGAAGGGTGTGTTCTGGTCTAGTCCTGTTCTTAGCATTGCAGATTATATTATTGCATCAAAGTATGTTTCAGATGACTAGAATTGTAACTGAAATTCTGAAGTGTTACGACACTTTATTTTATCACATAAAATAGGCAACCTCCGAGCATTATGTGTTTCAGTGTTTGATGTCCACAAACATGGTATAATAATAATACTTGTTGATTTGAATAAGATGGTCAGGTCAGTGCTTTAGTTTGCAGGCCCTGCGTCTGGTCTCATCAGTTCAAATCAATGCCAAATTGGGAG

>Glyma.02g148400.3 sequence-type=transcript locus=Glyma.02g148400 ID=Glyma.02g148400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACGTTGACTGCTTAAAAACGTATACATTATTTATGAAGCGATAAAAATCCAAATGAAACACGTTAGGTTGGTGGCGGTGAGTTGGAGCTTTGACCAGTTTGAGCACACGAGAATTCAGTGGGCATGTCAATGGCAAAAAAACCTGTGAAATACTCTCTGGTTGACGCGTTTACTGAGTCAGTGTTCAAAGGAAACCCTGCAGCAGTGTGTTTCTTAGAAGAGAAGAGGGACAAAAAGTGGTTGCAAGGAGTAGCTGCAGAGTTCAATCTATCTGTGACATGTTACTTAACTCGCATCACCGAGTCCCATGGAACAACCTCTTATCCTCGTTTTGATCTCAGATGGTTCACTCCTGTTAGTGAGATTAACCTTTGTGGACATGCGACCTTAGCTGCTGCGCACACAATATTTTCATCTGGTTTGGTGGACACCGATGTTGTCGAATTTGTGGCTATATCTGGAATATTAACTGCCAAAAAGATCCCAGCGATCAATATCACTAGTGCCTCAGACTTGCAAAAGGGTGAAGCTCAGGATGGGTTTTATGTTGAATTGAATTTCCCTGCTGATCCTGTTGTAGAATTCAATTTTGATGAGACTTCACAAATTTCTGGGGCATTGAACGGTGCTTCCATAATTGATATAAAGAGGACACAAGATGGAGGCGACTTAGTTGTAATTCCCATATCTGCTCTATTGGGTTTCTATTATTGTTATTCCCACACTTCACTCTACTTTCTTTCTTGTTGGTTAGAACCCTCAATTGGTTTGTTACCATAAAAGCAATATGATATGTTATGCTGTCTGACGAAGTCCATTTTTCATAATTTTTATTTTGGGATGCATCGTCCATATATGTTAACCTGCTTGATTCTTGAAATAAGAACAATAAATATCTCATGATAGTATGTAAGTTAACTTTACTTTTACCTGCAAAATAACAAGTATGCGTTTTAAGCAATTTGTGTGCATTGAACATTATGAAACTTGCAATTTTCCTAGGTTGTGGTCACTTCCGGAAGAGTTGTCGAGGAACTACAACCACAACTTGATGCAATAGTTAAATGTCCTGGAAGGGGGTTAATTGTTACGGGGATTGCTCCTCCAGGCTCAGAATTTGACTTCTGTAGTCGATTCTTCTGCCCAAAACTTGGAGTCAATGAGGATCCTGTTTGTGGGGGTGCACATTGTGCATTGGCACCCTACTGGAGCAAGAAGCTAGGGAAGTGTGATTTCAAAGCTTATCAGGCATCAGCCAGAGGGGGAGTTCTCAATGTTCATCTTGATGAGCAGAACCAAAGGGTGCTTTTGCGTGGGAAGGCTGTTAAAGTGATGGAAGGGTGTGTTCTGGTCTAGTCCTGTTCTTAGCATTGCAGATTATATTATTGCATCAAAGTATGTTTCAGATGACTAGAATTGTAACTGAAATTCTGAAGTGTTACGACACTTTATTTTATCACATAAAATAGGCAACCTCCGAGCATTATGTGTTTCAGTGTTTGATGTCCACAAACATGGTATAATAATAATACTTGTTGATTTGAATAAGATGGTCAGGTCAGTGCTTTAGTTTGCAGGCCCTGCGTCTGGTCTCATCAGTTCAAATCAATGCCAAATTGGGAG
Coding sequences of Glyma.02G148400
>Glyma.02g148400.1 sequence-type=CDS polypeptide=Glyma.02g148400.1.p locus=Glyma.02g148400 ID=Glyma.02g148400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCAATGGCAAAAAAACCTGTGAAATACTCTCTGCAGGTTGACGCGTTTACTGAGTCAGTGTTCAAAGGAAACCCTGCAGCAGTGTGTTTCTTAGAAGAGAAGAGGGACAAAAAGTGGTTGCAAGGAGTAGCTGCAGAGTTCAATCTATCTGTGACATGTTACTTAACTCGCATCACCGAGTCCCATGGAACAACCTCTTATCCTCGTTTTGATCTCAGATGGTTCACTCCTGTTAGTGAGATTAACCTTTGTGGACATGCGACCTTAGCTGCTGCGCACACAATATTTTCATCTGGTTTGGTGGACACCGATGTTGTCGAATTTGTGGCTATATCTGGAATATTAACTGCCAAAAAGATCCCAGCGATCAATATCACTAGTGCCTCAGACTTGCAAAAGGGTGAAGCTCAGGATGGGTTTTATGTTGAATTGAATTTCCCTGCTGATCCTGTTGTAGAATTCAATTTTGATGAGACTTCACAAATTTCTGGGGCATTGAACGGTGCTTCCATAATTGATATAAAGAGGACACAAGATGGAGGCGACTTAGTTGTTGTGGTCACTTCCGGAAGAGTTGTCGAGGAACTACAACCACAACTTGATGCAATAGTTAAATGTCCTGGAAGGGGGTTAATTGTTACGGGGATTGCTCCTCCAGGCTCAGAATTTGACTTCTGTAGTCGATTCTTCTGCCCAAAACTTGGAGTCAATGAGGATCCTGTTTGTGGGGGTGCACATTGTGCATTGGCACCCTACTGGAGCAAGAAGCTAGGGAAGTGTGATTTCAAAGCTTATCAGGCATCAGCCAGAGGGGGAGTTCTCAATGTTCATCTTGATGAGCAGAACCAAAGGGTGCTTTTGCGTGGGAAGGCTGTTAAAGTGATGGAAGGGTGTGTTCTGGTCTAG

>Glyma.02g148400.2 sequence-type=CDS polypeptide=Glyma.02g148400.2.p locus=Glyma.02g148400 ID=Glyma.02g148400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCAATGGCAAAAAAACCTGTGAAATACTCTCTGGTTGACGCGTTTACTGAGTCAGTGTTCAAAGGAAACCCTGCAGCAGTGTGTTTCTTAGAAGAGAAGAGGGACAAAAAGTGGTTGCAAGGAGTAGCTGCAGAGTTCAATCTATCTGTGACATGTTACTTAACTCGCATCACCGAGTCCCATGGAACAACCTCTTATCCTCGTTTTGATCTCAGATGGTTCACTCCTGTTAGTGAGATTAACCTTTGTGGACATGCGACCTTAGCTGCTGCGCACACAATATTTTCATCTGGTTTGGTGGACACCGATGTTGTCGAATTTGTGGCTATATCTGGAATATTAACTGCCAAAAAGATCCCAGCGATCAATATCACTAGTGCCTCAGACTTGCAAAAGGGTGAAGCTCAGGATGGGTTTTATGTTGAATTGAATTTCCCTGCTGATCCTGTTGTAGAATTCAATTTTGATGAGACTTCACAAATTTCTGGGGCATTGAACGGTGCTTCCATAATTGATATAAAGAGGACACAAGATGGAGGCGACTTAGTTGTTGTGGTCACTTCCGGAAGAGTTGTCGAGGAACTACAACCACAACTTGATGCAATAGTTAAATGTCCTGGAAGGGGGTTAATTGTTACGGGGATTGCTCCTCCAGGCTCAGAATTTGACTTCTGTAGTCGATTCTTCTGCCCAAAACTTGGAGTCAATGAGGATCCTGTTTGTGGGGGTGCACATTGTGCATTGGCACCCTACTGGAGCAAGAAGCTAGGGAAGTGTGATTTCAAAGCTTATCAGGCATCAGCCAGAGGGGGAGTTCTCAATGTTCATCTTGATGAGCAGAACCAAAGGGTGCTTTTGCGTGGGAAGGCTGTTAAAGTGATGGAAGGGTGTGTTCTGGTCTAG

>Glyma.02g148400.3 sequence-type=CDS polypeptide=Glyma.02g148400.3.p locus=Glyma.02g148400 ID=Glyma.02g148400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCAATGGCAAAAAAACCTGTGAAATACTCTCTGGTTGACGCGTTTACTGAGTCAGTGTTCAAAGGAAACCCTGCAGCAGTGTGTTTCTTAGAAGAGAAGAGGGACAAAAAGTGGTTGCAAGGAGTAGCTGCAGAGTTCAATCTATCTGTGACATGTTACTTAACTCGCATCACCGAGTCCCATGGAACAACCTCTTATCCTCGTTTTGATCTCAGATGGTTCACTCCTGTTAGTGAGATTAACCTTTGTGGACATGCGACCTTAGCTGCTGCGCACACAATATTTTCATCTGGTTTGGTGGACACCGATGTTGTCGAATTTGTGGCTATATCTGGAATATTAACTGCCAAAAAGATCCCAGCGATCAATATCACTAGTGCCTCAGACTTGCAAAAGGGTGAAGCTCAGGATGGGTTTTATGTTGAATTGAATTTCCCTGCTGATCCTGTTGTAGAATTCAATTTTGATGAGACTTCACAAATTTCTGGGGCATTGAACGGTGCTTCCATAATTGATATAAAGAGGACACAAGATGGAGGCGACTTAGTTGTAATTCCCATATCTGCTCTATTGGGTTTCTATTATTGTTATTCCCACACTTCACTCTACTTTCTTTCTTGTTGGTTAGAACCCTCAATTGGTTTGTTACCATAA
Predicted protein sequences of Glyma.02G148400
>Glyma.02g148400.1.p sequence-type=predicted peptide transcript=Glyma.02g148400.1 locus=Glyma.02g148400 ID=Glyma.02g148400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSMAKKPVKYSLQVDAFTESVFKGNPAAVCFLEEKRDKKWLQGVAAEFNLSVTCYLTRITESHGTTSYPRFDLRWFTPVSEINLCGHATLAAAHTIFSSGLVDTDVVEFVAISGILTAKKIPAINITSASDLQKGEAQDGFYVELNFPADPVVEFNFDETSQISGALNGASIIDIKRTQDGGDLVVVVTSGRVVEELQPQLDAIVKCPGRGLIVTGIAPPGSEFDFCSRFFCPKLGVNEDPVCGGAHCALAPYWSKKLGKCDFKAYQASARGGVLNVHLDEQNQRVLLRGKAVKVMEGCVLV*

>Glyma.02g148400.2.p sequence-type=predicted peptide transcript=Glyma.02g148400.2 locus=Glyma.02g148400 ID=Glyma.02g148400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSMAKKPVKYSLVDAFTESVFKGNPAAVCFLEEKRDKKWLQGVAAEFNLSVTCYLTRITESHGTTSYPRFDLRWFTPVSEINLCGHATLAAAHTIFSSGLVDTDVVEFVAISGILTAKKIPAINITSASDLQKGEAQDGFYVELNFPADPVVEFNFDETSQISGALNGASIIDIKRTQDGGDLVVVVTSGRVVEELQPQLDAIVKCPGRGLIVTGIAPPGSEFDFCSRFFCPKLGVNEDPVCGGAHCALAPYWSKKLGKCDFKAYQASARGGVLNVHLDEQNQRVLLRGKAVKVMEGCVLV*

>Glyma.02g148400.3.p sequence-type=predicted peptide transcript=Glyma.02g148400.3 locus=Glyma.02g148400 ID=Glyma.02g148400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSMAKKPVKYSLVDAFTESVFKGNPAAVCFLEEKRDKKWLQGVAAEFNLSVTCYLTRITESHGTTSYPRFDLRWFTPVSEINLCGHATLAAAHTIFSSGLVDTDVVEFVAISGILTAKKIPAINITSASDLQKGEAQDGFYVELNFPADPVVEFNFDETSQISGALNGASIIDIKRTQDGGDLVVIPISALLGFYYCYSHTSLYFLSCWLEPSIGLLP*






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