Glyma.02G115900

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Report for Sequence Feature Glyma.02G115900

Feature Type:	gene_model
Chromosome:	Gm02
Start:	11280858
stop:	11285984
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.02G115900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G26480.1	AT	general regulatory factor 12	JGI	N/A	IEA
GO:0019904	GO-mf	protein domain specific binding	EnsemblGenomes	N/A	IEA
KOG0841	KOG	Multifunctional chaperone (14-3-3 family)	JGI	N/A	IEA
PTHR18860	Panther	14-3-3 PROTEIN	JGI	N/A	IEA
PF00244	PFAM	14-3-3 protein	JGI	N/A	IEA

Proteins Associated with Glyma.02G115900

Locus	Gene Symbol	Protein Name
	SGF14f	14-3-3 protein SGF14f
	GF14b	GF14 gene family gene b

Expression Patterns of Glyma.02G115900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.02G115900 not represented in the dataset	Glyma.02G115900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.02G115900

Paralog	Evidence	Comments
Glyma.01g058000	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.02G115900 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.02g115900	Wm82.a4.v1	ISS	As supplied by JGI
Glyma02g12930	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.02G115900

Limit To All Plant Sequences

>Glyma.02g115900.2 sequence-type=transcript locus=Glyma.02g115900 ID=Glyma.02g115900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AATGTTATATTTAAACTAAACCACATTTATTTTTAGAGAAAGTTATAATGAAACTCTCTAAATTTTACATGAATTATATAACATTTGATGAGGTAAATGTGTAATTAGAGTAAAATTGAGAAAATATTAATAGAATTTATTTTTTATTTTATATTTGGTTCGTATCACACTTTTTTACAACATTTGATAAAATGACGGAAACAATTTTACAATGACAAATACAAAATTTAGACAAGATAGAAATCATACAAAAATATTTAGAAAAATTAGAAAATATCTAAAAAAGGGTAATTAAACCTAACAAATATAACAAGAAGACAATCCTACCATAAAAATAATATAAACAAATAGCAAAAATTACAGATAAGCAAGCATTGTTCTCTTCTGAGTCGATCACGATTTGCGCGCTTCGTCTTTCAAACTCAGAGATCCAACGGTTGAGATTTCGGTCTCCCTTTGACCTCCACAACATGCTCCCATCTTTGGCCACTATATAACCACTCCACCCTTTTCTATTTTTCTTCTTCCTTCATTGCATCGTTGTTGTTCCCTTCTTTTTTCTTTCTCCGCCCCTTTTTTGTTGTTCCTTCTTCTCGTTCGTCGCTTTGTGATCTCTCTCTGCAACCATGTCCGTCGAGAAAGAGAGAGAGACCCAGGTTTACTTGGCCAAGCTTGCCGAGCAGGCCGAGAGATACGAAGAAATGGTTGAGTGTATGAAGAAAGTAGCAAAACTTGATCTTGATCTGACTGTGGAAGAAAGGAACCTTCTCTCAGTGGGATACAAAAATGTGATTGGTGCACGAAGGGCCTCTTGGCGCATAATGTCCTCAATTGAGCAGAAGGAAGAGTCTAAGGGAAATGAGCACAATGTTAAACTGATCAAGAGTTACTGCCAAAAAGTTGAGGAGGAACTCTCCAAAATCTGTGGTGACATTCTGACTATTATAGACCAGCATTTGATTCCTTCTTCCGGATCAGCAGAAGCTAGCGTTTTCTACTACAAGATGAAAGGTGATTATTTTCGGTATCTTGCTGAGTTCAAGACTGACCAAGAAAGGAAAGAGGCAGCTGAGCAGTCACTAAAAGGATACGAGGCTGCTTCTGCCACTGCAAACACAGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCACTCAATTTCTCTGTCTTTTATTATGAGATAATGAACTCTCCTGAAAGGGCCTGCCATTTGGCCAAGCAAGCTTTTGATGAGGCAATTGCGGAGTTGGACACCCTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGCTGTTGAGAGACAACCTTACTCTCTGGACTTCCGATTTACCAGAGGATGGAGGTGAGGACAACATAAAAGCTGAAGAAGCCAAACCTTCTGAGCCTGAGCATTGATGTGATTCAGTAGTCAGAAATCTAAGCACCGTATTAGAGAGGGGTGCGTGGCAGCAAAAGGAGAATCAATTTCTAACTTGATTA

Coding sequences of Glyma.02G115900

Limit To All Plant Sequences

>Glyma.02g115900.1 sequence-type=CDS polypeptide=Glyma.02g115900.1.p locus=Glyma.02g115900 ID=Glyma.02g115900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCCGTCGAGAAAGAGAGAGAGACCCAGGTTTACTTGGCCAAGCTTGCCGAGCAGGCCGAGAGATACGAAGAAATGGTTGAGTGTATGAAGAAAGTAGCAAAACTTGATCTTGATCTGACTGTGGAAGAAAGGAACCTTCTCTCAGTGGGATACAAAAATGTGATTGGTGCACGAAGGGCCTCTTGGCGCATAATGTCCTCAATTGAGCAGAAGGAAGAGTCTAAGGGAAATGAGCACAATGTTAAACTGATCAAGAGTTACTGCCAAAAAGTTGAGGAGGAACTCTCCAAAATCTGTGGTGACATTCTGACTATTATAGACCAGCATTTGATTCCTTCTTCCGGATCAGCAGAAGCTAGCGTTTTCTACTACAAGATGAAAGGTGATTATTTTCGGTATCTTGCTGAGTTCAAGACTGACCAAGAAAGGAAAGAGGCAGCTGAGCAGTCACTAAAAGGATACGAGGCTGCTTCTGCCACTGCAAACACAGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCACTCAATTTCTCTGTCTTTTATTATGAGATAATGAACTCTCCTGAAAGGGCCTGCCATTTGGCCAAGCAAGCTTTTGATGAGGCAATTGCGGAGTTGGACACCCTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGCTGTTGAGAGACAACCTTACTCTCTGGACTTCCGATTTACCAGAGGATGGAGGTGAGGACAACATAAAAGCTGAAGAAGCCAAACCTTCTGAGCCTGAGCATTGA

>Glyma.02g115900.2 sequence-type=CDS polypeptide=Glyma.02g115900.2.p locus=Glyma.02g115900 ID=Glyma.02g115900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCCGTCGAGAAAGAGAGAGAGACCCAGGTTTACTTGGCCAAGCTTGCCGAGCAGGCCGAGAGATACGAAGAAATGGTTGAGTGTATGAAGAAAGTAGCAAAACTTGATCTTGATCTGACTGTGGAAGAAAGGAACCTTCTCTCAGTGGGATACAAAAATGTGATTGGTGCACGAAGGGCCTCTTGGCGCATAATGTCCTCAATTGAGCAGAAGGAAGAGTCTAAGGGAAATGAGCACAATGTTAAACTGATCAAGAGTTACTGCCAAAAAGTTGAGGAGGAACTCTCCAAAATCTGTGGTGACATTCTGACTATTATAGACCAGCATTTGATTCCTTCTTCCGGATCAGCAGAAGCTAGCGTTTTCTACTACAAGATGAAAGGTGATTATTTTCGGTATCTTGCTGAGTTCAAGACTGACCAAGAAAGGAAAGAGGCAGCTGAGCAGTCACTAAAAGGATACGAGGCTGCTTCTGCCACTGCAAACACAGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCACTCAATTTCTCTGTCTTTTATTATGAGATAATGAACTCTCCTGAAAGGGCCTGCCATTTGGCCAAGCAAGCTTTTGATGAGGCAATTGCGGAGTTGGACACCCTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGCTGTTGAGAGACAACCTTACTCTCTGGACTTCCGATTTACCAGAGGATGGAGGTGAGGACAACATAAAAGCTGAAGAAGCCAAACCTTCTGAGCCTGAGCATTGA

Predicted protein sequences of Glyma.02G115900

Limit To All Plant Sequences

>Glyma.02g115900.1.p sequence-type=predicted peptide transcript=Glyma.02g115900.1 locus=Glyma.02g115900 ID=Glyma.02g115900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSVEKERETQVYLAKLAEQAERYEEMVECMKKVAKLDLDLTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKSYCQKVEEELSKICGDILTIIDQHLIPSSGSAEASVFYYKMKGDYFRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNIKAEEAKPSEPEH*

>Glyma.02g115900.2.p sequence-type=predicted peptide transcript=Glyma.02g115900.2 locus=Glyma.02g115900 ID=Glyma.02g115900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSVEKERETQVYLAKLAEQAERYEEMVECMKKVAKLDLDLTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKSYCQKVEEELSKICGDILTIIDQHLIPSSGSAEASVFYYKMKGDYFRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNIKAEEAKPSEPEH*

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