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Report for Sequence Feature Glyma.01g245100

Feature Type:gene_model
Chromosome:Gm01
Start:57840467
stop:57848022
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g245100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G38130.1AT ATHD1,ATHDA19,HD1,HDA1,HDA19,RPD3A JGI N/AIEA
3.5.1.98EC histone deacetylase JGI N/AIEA
PF00850Pfam Histone deacetylase domain JGI N/AIEA

Proteins Associated with Glyma.01g245100
LocusGene SymbolProtein Name
HDA1 histone deacetylase

Gene model name correspondences to Glyma.01g245100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g45660 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g245100
>Glyma.01g245100.2 sequence-type=CDS polypeptide=Glyma.01g245100.2.p locus=Glyma.01g245100 id=Glyma.01g245100.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAAGTGGAGGGAACTCCCTTCCATCAGGGTCAGATGGTGTGAAGAGAAAGGTTTCATATTTCTATGATCCAGAGGTTGGAAACTATTATTATGGGCAGGGACACCCAATGAAACCACACAGGATTCGAATGACACATGCTCTTTTAGCCCACTATGGATTGCTTCAACACATGCAGGTTCTGAAGCCTATGGCTGCTAAAGATAGGGACCTTTGCAAGTTCCATGCTGATGATTATGTGGCCTTTCTGAGAGGCATCACCCCTGAAACGCAGCAAGATCAATTGAGACAGCTGAAGAGGTTTAATGTTGGCGAAGACTGCCCTGTATTTGATGGTCTTTACTCTTTCTGCCAGACATATGCAGGAGGTTCTGTTGGTGGTGCTCTAAAGTTGAACCATGGAGTATGTGATATTGCAATAAATTGGGCTGGTGGTCTACATCATGCAAAGAAGTGTGAGGCTTCTGGGTTTTGCTATGTTAATGACATTGTGCTGGCTATTTTGGAACTTCTCAAAATACATGAGCGTGTTCTGTATGTGGACATTGATATCCACCATGGTGATGGTGTAGAGGAGGCCTTTTACACCACCGATAGGGTCATGACTGTTTCGTTTCATAAGTTTGGGGATTACTTTCCTGGAACAGGTGATATTCGTGATATTGGATATGCTAAAGGGAAATATTATTCACTAAATGTTCCCTTGGATGATGGAATTGATGATGAGAGCTATCAGTCCTTGTTTAAGCCAATAATGGGAAAGGTTATGGAGATTTTTAGGCCCGGTGCTGTTGTATTACAATGTGGTGCTGACTCTTTATCTGGGGACAGGTTAGGTTGTTTCAATCTTTCCATAAAAGGTCATGCAGAGTGTGTCAGATATATGAGATCTTTTAATGTTCCCCTTCTATTGCTCGGGGGAGGTGGCTATACAATAAGAAATGTGGCACGTTGTTGGTGTTTCGAGACTAGCGTTGCTCTTGGGATTGAACTAGATGATAAGATGCCTCAACATGAATATTATGAATATTTTGGTCCTGACTATACTCTTCATGTTGCTCCAAGTAACATGGAAAACAAGAACTCCCGACAATTATTGGATGAAATAAGAGCAAAACTTCTTGATAATTTATCTAGGCTTCAACATGCACCAAGTGTCCCATTCCAGGAACGGCCACCTGATGCAGAGCTTCTAGAGAGAGATGAAGATCAAGATGATAGAGATGAAAGATGGGATCCCGATTCTGACAGGGAGGTTGGCGATGACAGCAATCCTGTTCGCAGAAGGGTGAAAAGTGAATGCGTTGATGCTGAGGATAAAGATACAGTGTCGGGGGTGGACTCAATGGCAGTGGATGAACCATGCATCAAAGAGGAGCAGGATAATTTAAAAGAGCTTTCTGATCACAGGCCAAGATGA

>Glyma.01g245100.3 sequence-type=CDS polypeptide=Glyma.01g245100.3.p locus=Glyma.01g245100 id=Glyma.01g245100.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAAGTGGAGGGAACTCCCTTCCATCAGGGTCAGATGGTGTGAAGAGAAAGGTTTCATATTTCTATGATCCAGAGGTTGGAAACTATTATTATGGGCAGGGACACCCAATGAAACCACACAGGATTCGAATGACACATGCTCTTTTAGCCCACTATGGATTGCTTCAACACATGCAGGTTCTGAAGCCTATGGCTGCTAAAGATAGGGACCTTTGCAAGTTCCATGCTGATGATTATGTGGCCTTTCTGAGAGGCATCACCCCTGAAACGCAGCAAGATCAATTGAGACAGCTGAAGAGGTTTAATGTTGGCGAAGACTGCCCTGTATTTGATGGTCTTTACTCTTTCTGCCAGACATATGCAGGAGGTTCTGTTGGTGGTGCTCTAAAGTTGAACCATGGAGTATGTGATATTGCAATAAATTGGGCTGGTGGTCTACATCATGCAAAGAAGTGTGAGGCTTCTGGGTTTTGCTATGTTAATGACATTGTGCTGGCTATTTTGGAACTTCTCAAAATACATGAGCGTGTTCTGTATGTGGACATTGATATCCACCATGGTGATGGTGTAGAGGAGGCCTTTTACACCACCGATAGGGTCATGACTGTTTCGTTTCATAAGTTTGGGGATTACTTTCCTGGAACAGGTGATATTCGTGATATTGGATATGCTAAAGGGAAATATTATTCACTAAATGTTCCCTTGGATGATGGAATTGATGATGAGAGCTATCAGTCCTTGTTTAAGCCAATAATGGGAAAGGTTATGGAGATTTTTAGGCCCGGTGCTGTTGTATTACAATGTGGTGCTGACTCTTTATCTGGGGACAGGTTAGGTTGTTTCAATCTTTCCATAAAAGGTCATGCAGAGTGTGTCAGATATATGAGATCTTTTAATGTTCCCCTTCTATTGCTCGGGGGAGGTGGCTATACAATAAGAAATGTGGCACGTTGTTGGTGTTTCGAGACTAGCGTTGCTCTTGGGATTGAACTAGATGATAAGATGCCTCAACATGAATATTATGAATATTTTGGTCCTGACTATACTCTTCATGTTGCTCCAAGTAACATGGAAAACAAGAACTCCCGACAATTATTGGATGAAATAAGAGCAAAACTTCTTGATAATTTATCTAGGCTTCAACATGCACCAAGTGTCCCATTCCAGGAACGGCCACCTGATGCAGAGCTTCTAGAGAGAGATGAAGATCAAGATGATAGAGATGAAAGATGGGATCCCGATTCTGACAGGGAGGTTGGCGATGACAGCAATCCTGTTCGCAGAAGGGTGAAAAGTGAATGCGTTGATGCTGAGGATAAAGATACAGAAAGTTATCATAAACATCTAGATTGTGGAAGAGATTATCTTACGCCTTTCAAGGAGATTTCATGCTCCAAGGTGTCGGGGGTGGACTCAATGGCAGTGGATGAACCATGCATCAAAGAGGAGCAGGATAATTTAAAAGAGCTTTCTGATCACAGGCCAAGATGA
Predicted protein sequences of Glyma.01g245100
>Glyma.01g245100.2.p sequence-type=predicted peptide transcript=Glyma.01g245100.2 locus=Glyma.01g245100 id=Glyma.01g245100.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MESGGNSLPSGSDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPMAAKDRDLCKFHADDYVAFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGALKLNHGVCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKIHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYAKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCFETSVALGIELDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLDEIRAKLLDNLSRLQHAPSVPFQERPPDAELLERDEDQDDRDERWDPDSDREVGDDSNPVRRRVKSECVDAEDKDTVSGVDSMAVDEPCIKEEQDNLKELSDHRPR*

>Glyma.01g245100.3.p sequence-type=predicted peptide transcript=Glyma.01g245100.3 locus=Glyma.01g245100 id=Glyma.01g245100.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MESGGNSLPSGSDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPMAAKDRDLCKFHADDYVAFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGALKLNHGVCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKIHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYAKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCFETSVALGIELDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLDEIRAKLLDNLSRLQHAPSVPFQERPPDAELLERDEDQDDRDERWDPDSDREVGDDSNPVRRRVKSECVDAEDKDTESYHKHLDCGRDYLTPFKEISCSKVSGVDSMAVDEPCIKEEQDNLKELSDHRPR*






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