SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g244400

Feature Type:gene_model
Chromosome:Gm01
Start:57774798
stop:57785373
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g244400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G43610.1AT JGI N/AIEA
GO:0000226GO-bp microtubule cytoskeleton organization JGI N/AIEA
GO:0000922GO-cc spindle pole JGI N/AIEA
GO:0005815GO-cc microtubule organizing center JGI N/AIEA
K16573KEGG Cytoskeleton proteins JGI N/AIEA
KOG2000 KOG Gamma-tubulin complex, DGRIP91/SPC98 component JGI N/AIEA
PTHR19302PantherFam GAMMA TUBULIN COMPLEX PROTEIN JGI N/AIEA
PF04130Pfam Gamma tubulin complex component C-terminal JGI N/AIEA

Gene model name correspondences to Glyma.01g244400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g45540 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g244400
>Glyma.01g244400.1 sequence-type=CDS polypeptide=Glyma.01g244400.1.p locus=Glyma.01g244400 id=Glyma.01g244400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGATACCAAGTTTGCGTCCCTTCTTTTGGAGAATTTGAAGCTACAGGATCCATGGCTTCCCCCCGACACATGGGAATCCATACCTTCTGAAAGTGGGCTACTGCTTTCTTCTCCTATACCTAATTCAAACCAACCTCTCTGCCACCTCTCCACTCTCTCTGAATCTAGTTTGGTGAGGTTGGCCGTGAATGCCATGCAGGGTGCTAAATCTTCCCTTGTTATTATTCAAAACCTGTCTGCCATCTTTTCTTCTGATCCATCTGTCAGGTCCTTCCTCTGGAATCGTGCTTCCACCACTCGTTCTCTTGGAAATATACTTATCTCTATTGGCTGCACCGGCTCTCTGCTCTTTCTTCTCCGTGCTTTTGTTGATTATTTTACAGACACTTTTCCACTCATTCATCATGACTCTCCTCCCTTTACTCTCGTTAATCAAGCCTTTGCTGTTTCTGTGGGAAAAGTCTTGGAAGGCTACATCTGTGGATTGGACACTATTCATACATCTGTACTTTTAAGGCGTTCATCTAAGGATGTCGATTTCACTGTGCCTGGGTGTTTGAAGAATGTAGTGCATTCTGAAATTACACTTCTTGAGTTTTACCTGCACACTAAAGAACTAAGGACTCAGATTGAAGCCCTTGCTAGTGTTTGTAACCTACAAAAGTGGGTTCATTGCTTTCCAGACACTGCTTTCCAGGACCTGATTACTGAAGCTACTTCTGAATTTCGTAACTTCTTCAGAGGGGGGAATCTGTTAACTTTTTTGTTTGCACAATTACAGGTAGCTGATCCTGCTCACTGCACCCTGCTCAAGTTTCTTTTTCTTCAATCATGTGAACCATATTGTGGGTTCATAAGATCATGGATTTTCAAAGCAGAAGTCCATGACCCATATAAGGAATTTATTATAGAAAATATGGACTGTTTACCTCATAAGTCACATGTTAAAGCTGGCCATTCTGTTGACTTTCCATTAGCAAGTGTCAAGGTGCGAGATGGAGTTCCCATTCCTGGATTTCTCAAAGACTTCTTGGTTCCACTTGTTAGAGCTGGTCTGCAGCTTCAAGTACTGTTGAAATTGCTTGAAACGTGCATTCATGTTGCTTCTGGAGAACACAGTTGTCATGACTTTCTACCCTGTTGGAGTGGCTTTTCAAGTAGTCTGTCTTATTCTTCTCCATTGACTTTCAGCAAAGATGTTATAGAAGCTATGGTTCTTGCAAGAGAAAATTATTATAAAAGGATGAATGAAAAAATTGAAAGCCTTTTGAGCAGCTTAGAAGTTAGATATCAGCAGGTAGCCATGCGTGCTTTAGTACCTTCTTTTGATAATGGTGGAGGTACCTTAGACAAACTAGGCCAGATCATGTCAGAAAACAATTTTGTTGGTTGCCCCACAGCAGATAAAAGAAGTTTAAATATGGGCATTGGTGATTTGGGCTCTGATGTCTCAAGTACAATAGATGAGTTCTCTTTGCTGGAAGATGTGTGTGATTTATCTGAAAGCTCATCCTTATACAGCTCTGAGGAGCAATTGGATTGTGATCAGCTTAGTGGCTGGTCTTGTCCAGTAGTTGGGCAACAAAATCATTTATCTGCTTTAAGCTTCTTGAAGAGTAGTACCTTAAATAATTCAATACAAAATTCCTGCCATCATGAAAGCTCAGGCAGTGATTCGCATGGAATCTGTGATAAAATGGATGCTACTGATGTGTTGATGAAGACCTCCCATGAGGTAGTGATATCGAGTCACATGTCTAATCCTCTAAATCCAGAGAATTCAAGCTGCTTATGTAAATTCAGTATTCAAGATAGAGAGAGTTTGATTGACAGTTGTTCAGGAATGGGTCACTTTTTGAAAAAATCATTTGATAATGATGGAACTGTTGAGCCAAAGGTGACTGAAAAGCACCTGGGACCCCTGAAATATTCTATGTTATGCCATGACATTAATACCATTAGCAATACTTTGAGTGGGGAAGCCACAAAGGAGGATCAACCTGACAATAATACACTCACTTCACATTTGTACGGTTTCCAACCACAAAAATATGGCCATCAGTGTAACCATCCCAGCATTAATCCCCTTAGTGTGAACCCTATGTTGACAAGGAATTCAATTCTTCACCTGATGGGTAGGAATGGGGGAAAATACAAGGCTGATCATGAACAAACTTTGCCTTACTTCAATTTTTCTACTGTAGAGGACCCATGTAAGGTTTATATGGACAAGGTACCCACCAACTCTAGATGTAGAAGTGCATCTTCATTTACACTAGATAGTAATGTGTCTAATCGTAATGATAAGAATAATGAACATGGAGAAATTGACTGTGGTAGAGAGAATGGGTTGGTTGATGTTCCCAAAGTATGTTTTGATGCTTCACCGGACTTGATGGACCATAAACATTTAACAGTTGTATCTGGTGGGAGCAGCTGGGAAAGATTACTAGGTAGTTTTGGAAAAACTGTCAATGTTGATGATACTCAAAAACAAAGTTTGTTGTCAGCATTTGAGATACCACTCGATATTATAATTGACAAGTGCTTGCTGCAGGAAATCATGCTTCAATACAATTATGTCAGCAAGCTAGCCATCAATGTGCTTGAGGAAGCATTTAAGTTGCAAGAGCATCTTTTGGCACTACGGCGGTATCATTTTATGGAGTTAGCAGATTGGGCAGATTTGTTTATCCTGTCTCTTTGGCATCATAAGTGGTCTGTTACAGAAGCAAATGAGAGACTTTCAGAAATTCAAGGTCTACTTGAGTTGTCAATTCAGAAGTCTTCTTGTGAACAAGACACTCACAAGGATAGGTTATTTGTGTACATGAAAGGACATGGGAAATTGCCTCTTTCTGCATCTGCTATTGGGGTCCGTTCTTTTGATTTCTTAGGACTGGGTTACCATGTGCAGTGGCCACTCAGTATTGTTTTAACACCTGCTGCATTGAAAGTATATGCTGATATATTCAGCTTTTTGATACAAGTGAAGCTTGCCATTTTTTCATTGACAGATGTATGGTGCTCGTTGAAGGATTTGGTGCATACAACCAATAAAAATCAAAATTCTGAAATACACCAGCTTGAGACAGGGCATCTTAATATGTTGATGAAGATGAGGCACCAGATAAACCATTTTGTATCTACTTTGCAGCAGTATGTAGAGTCACAATTATCTCATGTATCATGGTGCAGGTTTCTTCATTCCCTTCAGCATAAGGTGAAAGATATGATGGATCTTGAATCAGTGCACATGGAATATCTTGCTGATTCGTTATGCATATGTTTCCTGTCTGATGAAACAAAGGCAGTTGGCAGCATTATTGAGAGCATTTTGCAATGTGCACTCGATTTCCGGTCTTGTATTACAGTTGGTTCTTGGGATTCTGGAAGTGATCCAGAAGATTTGCTAGGCAAACTTTCTAAAATCAATATATCCCAGGTGCTTTCTATAAAGCAGAAGTTTGATAGAAGTCTAAAAGAACTGCACATATGTTATATTAAGGGACCTAAACATGGGAATTTTGGGCTTTCTCGTTTCTGGGATTATCTAAACTATAATGAATATTATTCAAATGTCAGCAATGAGATGGGGTACTATGCCGTCTGA
Predicted protein sequences of Glyma.01g244400
>Glyma.01g244400.1.p sequence-type=predicted peptide transcript=Glyma.01g244400.1 locus=Glyma.01g244400 id=Glyma.01g244400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MADTKFASLLLENLKLQDPWLPPDTWESIPSESGLLLSSPIPNSNQPLCHLSTLSESSLVRLAVNAMQGAKSSLVIIQNLSAIFSSDPSVRSFLWNRASTTRSLGNILISIGCTGSLLFLLRAFVDYFTDTFPLIHHDSPPFTLVNQAFAVSVGKVLEGYICGLDTIHTSVLLRRSSKDVDFTVPGCLKNVVHSEITLLEFYLHTKELRTQIEALASVCNLQKWVHCFPDTAFQDLITEATSEFRNFFRGGNLLTFLFAQLQVADPAHCTLLKFLFLQSCEPYCGFIRSWIFKAEVHDPYKEFIIENMDCLPHKSHVKAGHSVDFPLASVKVRDGVPIPGFLKDFLVPLVRAGLQLQVLLKLLETCIHVASGEHSCHDFLPCWSGFSSSLSYSSPLTFSKDVIEAMVLARENYYKRMNEKIESLLSSLEVRYQQVAMRALVPSFDNGGGTLDKLGQIMSENNFVGCPTADKRSLNMGIGDLGSDVSSTIDEFSLLEDVCDLSESSSLYSSEEQLDCDQLSGWSCPVVGQQNHLSALSFLKSSTLNNSIQNSCHHESSGSDSHGICDKMDATDVLMKTSHEVVISSHMSNPLNPENSSCLCKFSIQDRESLIDSCSGMGHFLKKSFDNDGTVEPKVTEKHLGPLKYSMLCHDINTISNTLSGEATKEDQPDNNTLTSHLYGFQPQKYGHQCNHPSINPLSVNPMLTRNSILHLMGRNGGKYKADHEQTLPYFNFSTVEDPCKVYMDKVPTNSRCRSASSFTLDSNVSNRNDKNNEHGEIDCGRENGLVDVPKVCFDASPDLMDHKHLTVVSGGSSWERLLGSFGKTVNVDDTQKQSLLSAFEIPLDIIIDKCLLQEIMLQYNYVSKLAINVLEEAFKLQEHLLALRRYHFMELADWADLFILSLWHHKWSVTEANERLSEIQGLLELSIQKSSCEQDTHKDRLFVYMKGHGKLPLSASAIGVRSFDFLGLGYHVQWPLSIVLTPAALKVYADIFSFLIQVKLAIFSLTDVWCSLKDLVHTTNKNQNSEIHQLETGHLNMLMKMRHQINHFVSTLQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESVHMEYLADSLCICFLSDETKAVGSIIESILQCALDFRSCITVGSWDSGSDPEDLLGKLSKINISQVLSIKQKFDRSLKELHICYIKGPKHGNFGLSRFWDYLNYNEYYSNVSNEMGYYAV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo