SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g224700

Feature Type:gene_model
Chromosome:Gm01
Start:56446390
stop:56449461
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g224700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G64350.1AT SEH1H JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K14299KEGG Messenger RNA biogenesis JGI N/AIEA
KOG2445 KOG Nuclear pore complex component (sc Seh1) JGI N/AIEA
PTHR11024PantherFam NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER JGI N/AIEA
PF00400Pfam WD domain, G-beta repeat JGI N/AIEA

Gene model name correspondences to Glyma.01g224700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g43410 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g224700
>Glyma.01g224700.1 sequence-type=CDS polypeptide=Glyma.01g224700.1.p locus=Glyma.01g224700 id=Glyma.01g224700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGAAGGAGTTGTTGACTCTTGATAATGGCACAACCTGCACATCATGGAACTATTCTGGCACCAGGCTCGCTGCGGGTTCCGTTGATGGCACGCTTTCAATCTTCGATTCCCGCGACCCACCTTCATCTTCTTCCCTCCATTCTACTTTCAAATCTAGGGTTCTAGAAGGAAACATTGTGAAGATTGTTTGGATTCCGCCAGAGTATGGTGATGCAGTTGCGTGCATTTCTGCCGATGGAATTGTTTCATTGTGGGAGGAGGTCGCAGAAGATTCCCAGTCTCTTCAGTGGAAGATGTGCAAAAGCTTTGGAAACAGTTCAAGCAAAGTCCTTGATGCTCAATTTGGAATCTCTCTGACTAGTTTGAAAATGGTTGCTGCATATTCAGATGGGAATGTAAGAGTTTTTGAGCTCTCGGATCCCTTGGAACTGAGAAACTGGCAGCTTCAGGCTGAATTTCAAAATGTTATCGAGTCAGTGTCTTCGTTTGGAAAGGCCTCATGCCTCTCAGCATCCATATCTTGGAATCCACAAAAAGGTGGAAGCCAGGAGTCCAGCTTCCTTGTAGGCTTCAATTCAAATACATCAGAGCTTAATTCTTCTAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTGGCAGAACTGGCACTGCCTGAGGAGAAGGGTGATCAGCTTTATGCTGTTGCATGGGCACCAAATATTGGCAGACCATATGAGATCATTGCGGTTGCAACCCACAAGGGACTTGCAATATGGCATCTTGGATTGAACCCTGATCATGATGGAAGACTCCCAGTAGAGAGAGTTGCACTACTGTCAGGTCACGAGGGCATGGTGTGGCAAATGGAGTGGGATATGAGTGGAATGACTTTGGCTACTACAGGTCATGATGGAATGGTCCGATTATGGCAGTCGAATCTCAATGGCGTTTGGCATCAGCAAGCTGCATTTGAACCCACTTCTTAG
Predicted protein sequences of Glyma.01g224700
>Glyma.01g224700.1.p sequence-type=predicted peptide transcript=Glyma.01g224700.1 locus=Glyma.01g224700 id=Glyma.01g224700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAKELLTLDNGTTCTSWNYSGTRLAAGSVDGTLSIFDSRDPPSSSSLHSTFKSRVLEGNIVKIVWIPPEYGDAVACISADGIVSLWEEVAEDSQSLQWKMCKSFGNSSSKVLDAQFGISLTSLKMVAAYSDGNVRVFELSDPLELRNWQLQAEFQNVIESVSSFGKASCLSASISWNPQKGGSQESSFLVGFNSNTSELNSSKVWEFDQAHQRWLPVAELALPEEKGDQLYAVAWAPNIGRPYEIIAVATHKGLAIWHLGLNPDHDGRLPVERVALLSGHEGMVWQMEWDMSGMTLATTGHDGMVRLWQSNLNGVWHQQAAFEPTS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo