SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g219400

Feature Type:gene_model
Chromosome:Gm01
Start:55998389
stop:56000010
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g219400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G11600.1AT ATGPX6,GPX6,LSC803,PHGPX JGI N/AIEA
1.11.1.12EC phospholipid-hydroperoxide glutathione peroxidase JGI N/AIEA
GO:0006979GO-bp response to oxidative stress JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0004602GO-mf glutathione peroxidase activity JGI N/AIEA
GO:0016209GO-mf antioxidant activity JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
K00432KEGG Pathways of neurodegeneration - multiple diseases JGI N/AIEA
KOG1651 KOG Glutathione peroxidase JGI N/AIEA
PTHR11592PantherFam GLUTATHIONE PEROXIDASE JGI N/AIEA
PF00578Pfam AhpC/TSA family JGI N/AIEA

Gene model name correspondences to Glyma.01g219400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g42840 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g219400
>Glyma.01g219400.1 sequence-type=CDS polypeptide=Glyma.01g219400.1.p locus=Glyma.01g219400 id=Glyma.01g219400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTAGCCAATCAAACACTAAATCAGTTCACGATTTCACAGTTAAAGATGCCAGGGGAAATAATGTTAATCTCGCCGATTACAAAGGAAAGGTCCTTCTCATTGTCAATGTTGCCTCACAATGCGGCTTGACTAATTCAAACTACACAGAGCTTAACCAATTGTATGAGAAATACAAAGGGAAAGGACTTGAAATTCTGGCATTCCCATGCAATCAGTTTGGGGCTCAGGAGCCAGGAACTAATGAAGAGATTGTGGAGTTTGCTTGTACTCGCTTCAAAGCTGAGTTTCCCATTTTCGACAAGGTGGATGTGAATGGTGACAATGCTGCTCCACTGTACAAGTTTCTGAAATCAAGCAAAGGTGGACTCTTTGGGGATAGTATCAAATGGAACTTCTCCAAATTCCTTGTTGATAAGGATGGGAATGTCGTTGACCGTTATGCACCCACAACTTCTCCTCTCAGCATTGAGAAAGACATAAAGAAGCTGCTAGATGCATGA

>Glyma.01g219400.2 sequence-type=CDS polypeptide=Glyma.01g219400.2.p locus=Glyma.01g219400 id=Glyma.01g219400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTAGCCAATCAAACACTAAATCAGTTCACGATTTCACAGTTAAAGATGCCAGGGGAAATAATGTTAATCTCGCCGATTACAAAGGAAAGGTCCTTCTCATTGTCAATGTTGCCTCACAATGCGGCTTGACTAATTCAAACTACACAGAGCTTAACCAATTGTATGAGAAATACAAAGGGAAAGGACTTGAAATTCTGGCATTCCCATGCAATCAGTTTGGGGCTCAGGAGCCAGGAACTAATGAAGAGATTGTGGAGTTTGCTTGTACTCGCTTCAAAGCTGAGTTTCCCATTTTCGACAAGGTGGATGTGAATGGTGACAATGCTGCTCCACTGTACAAGTTTCTGAAATCAAGCAAAGGTGGACTCTTTGGGGATAGTATCAAATGGAACTTCTCCAAATTCCTTGTTGATAAGGATGGGAATGTCGTTGACCGTTATGCACCCACAACTTCTCCTCTCAGCATTGAGGTAATTAAGTTCATTTGTATGATGCCAATGCCATGCATGCTACCAATATGTTTATTATTGCTTGCTTTTTCAGATAATGCTAACTTTTTCGTGTTGTTGATATCTGCAGAAAGACATAAAGAAGCTGCTAGATGCATGAATAATGATTAG
Predicted protein sequences of Glyma.01g219400
>Glyma.01g219400.1.p sequence-type=predicted peptide transcript=Glyma.01g219400.1 locus=Glyma.01g219400 id=Glyma.01g219400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASQSNTKSVHDFTVKDARGNNVNLADYKGKVLLIVNVASQCGLTNSNYTELNQLYEKYKGKGLEILAFPCNQFGAQEPGTNEEIVEFACTRFKAEFPIFDKVDVNGDNAAPLYKFLKSSKGGLFGDSIKWNFSKFLVDKDGNVVDRYAPTTSPLSIEKDIKKLLDA*

>Glyma.01g219400.2.p sequence-type=predicted peptide transcript=Glyma.01g219400.2 locus=Glyma.01g219400 id=Glyma.01g219400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASQSNTKSVHDFTVKDARGNNVNLADYKGKVLLIVNVASQCGLTNSNYTELNQLYEKYKGKGLEILAFPCNQFGAQEPGTNEEIVEFACTRFKAEFPIFDKVDVNGDNAAPLYKFLKSSKGGLFGDSIKWNFSKFLVDKDGNVVDRYAPTTSPLSIEVIKFICMMPMPCMLPICLLLLAFSDNANFFVLLISAERHKEAARCMNND*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo