Glyma.01g209800

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Report for Sequence Feature Glyma.01g209800

Feature Type:	gene_model
Chromosome:	Gm01
Start:	54132733
stop:	54141714
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.01g209800

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G35720.1	AT	DNAJ heat shock N-terminal domain-containing protein	JGI	N/A	IEA
GO:0016020	GO-cc	membrane	EnsemblGenomes	N/A	IEA
GO:0016021	GO-cc	integral component of membrane	EnsemblGenomes	N/A	IEA
KOG0718	KOG	Molecular chaperone (DnaJ superfamily)	JGI	N/A	IEA
PTHR24078	Panther	DNAJ HOMOLOG SUBFAMILY C MEMBER	JGI	N/A	IEA
PTHR24078:SF15	Panther	DNAJ HOMOLOG SUBFAMILY C MEMBER 18	JGI	N/A	IEA
PF00226	PFAM	DnaJ domain	JGI	N/A	IEA
PF11875	PFAM	Domain of unknown function (DUF3395)	JGI	N/A	IEA

Expression Patterns of Glyma.01g209800

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.01g209800

Paralog	Evidence	Comments
Glyma.11g032400	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.01g209800 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma01g41850	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.01g209800

Limit To All Plant Sequences

>Glyma.01g209800.2 sequence-type=transcript locus=Glyma.01g209800 ID=Glyma.01g209800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACTCAATTTCTTTTCTAACACGTTGACGTCGGCCAAGGAAGAGAGTAAGCGAAGACCCCTTAAACGTTAAACCCTTTACTTTCCAAACACTGCAAAACCCTAACCTCTGGGGGTTCCAAAATTTCCACGACGAGGCACCGCAATGGACGAACCGAACGAAGCACAAGACAACAGAGAACTCTACGCGCTCTTGAATTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAGAGCGTATCGTCAATGGGCGCAAGCCTATCATCCCGATAAATACCAAGCTCCTCACATGAAGGATATTGCTACGGAGAACTTTCAGCGAATATGCGAAGCGTATGAGATTCTTTCAGATCCAAATAAAAGGCAAATATATGATATCTACGGCATGGAGGGGTTGACCTCTGGTTTGGAACTTGGTCCAAAGCTTAATGGAGCTGAAGAGATCAAGGCAGAACTCGAGAGATTGAAGAGGATGAAGGAACGCGAGAAAATGGCGGCGCATTTTCAACCCTCCGGTACAATTGTGGCCAATATGTCTTTGCCACGCTATCTAGACGGAAATGGCATGCTCAGAGGAATGGCTATGACAAGTGAAATCCAGTCTCAGTTATCAAAGCGTAATGCTGTTACGATTGGTGGTAATTTAGCAGTGAATGGAGAGGAAGGCGGTGGAGCTGCTACTGCTGTATTTAGGCATCATCTTTCAGAAGTTTCGTCAGTAGAGGTTGTGGCCTCAGCTGGTCTGCGTGCACTAATTGGGGTGCAAACAACTCGTAATCTATCATCACACTCAGCTGCAACAATGGGCATAGCACTGTCTCTGAAAGACGGTTCATTGAATCTTTCAAATTTATGGACCCGCCAACTGTCAGAAACAGCAAGTGGACATATAGAGCTTGCTTTGGGGCCACATTCATCTGTAACTGTTGGGTGGCAAAAGAAAGATCAGAGAAGGTCTGCCTCTGGAGAAGTGAAGTTTGGCACAGGTTCTTTTGAGACATCAGTTCATTATACTCATCGTTTTTCTCCTAAATCTCTTGGCTGCATTGTGGGAAGAGTTGGGAGTTCTTCCCTTGAGGTTGAAGTCGGTGGTGGGAGGAAGCTATCCAAATTCAGCTCGGTACGCTGGTTGTATATAATAGGAATTCAGGGTATTTCCTGGAAATTTGAGCTGTATCGTGGGGGTCAGAAGTTAATTATTCCTATTTTGCTGACAAGACATCTGAACCCTGTGTTTGCTACTGGAGCATTTGTCGTTCCTGCATCTCTTTACTTTGTTCTAAAGAAACTTTTTATTAAACCTTATTACCTTAGAAGGAATAAACAGAAGGCTCTGGAGGAGAAGGAGAAAACTTCTGCTCAGGTTAAGGAAGCACGAGCTACAGCAGAGAAAGCTCAGAATTTACAACAAAATGTGGCTAATAGGAAAAGAAACAAGCAATTAGAAACAGGTGGACTGGTTATTATGAGAGCACTATATGGAAATCAGAGAATTTTGAACAACTTAAAGTCATCAAGTGAAACAAGTTTTGAATTAACTTCAGAAGTCATTGATGTTACAATACCTTTGAATTTTCTAGTTAATGATTCTGGCCAACTCAAGCTTCATGAAGGTGTAAAAAAATCAGGCATCATGGGTTTCTGTGATCCATGTCCAGGAAGTCCTAAAGACTTGTATGTAGAGTACGTCTATGCTGGCAATCAATACAGGGTATTACCAGTTGCTTGTTATGATTCAAAATTGTTATAATCCTCTCGCATCTGGTTTATCCAAGGGCTAATTAAAATGTTGAAGCAGGTTTGGGCTGGTGATTATGAAGAATTACAGATCCCTCAGGGCAGCCACAGGATATAAAGGATTATTATTAACACATCAATATATCATTGTAACCTCTTGCAGTTTTGCCTGATTTATATACGCTTGAGGTACTACTGCATTTTATCCTGTCAGATGGAATTAGAGGAGGTACCTTTTACGATTTTTGGGCCAGTGGTACCGTCACTTATTTTTTAAATCTTTTATTTTTCCCATAATTTATTACACCCCGAAAATGTATGAAATAAGGATATTTTAGGAGGCGGTTTTAGTATTTTGTCAAGTTGCGTCTCTCTCTCTAAACTATTAACTCTGCTGCTGGATCCCAATTTTGGTTAGTCATACTCCTTTTATTGTTGATTCGTTGCCCGTTCACATAAATTCTTTCTCGAGACAACAGCCAACAGCTGTTGGAGGTTTGATTTGATGTTTGTATTATCAAGTTTTCATTTGGGTTTGTACTTAATATATGATACACTATTTATGACAATAACATCGGTGAATCAAATTGAGCGCCG

Coding sequences of Glyma.01g209800

Limit To All Plant Sequences

>Glyma.01g209800.1 sequence-type=CDS polypeptide=Glyma.01g209800.1.p locus=Glyma.01g209800 ID=Glyma.01g209800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACGAACCGAACGAAGCACAAGACAACAGAGAACTCTACGCGCTCTTGAATTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAGAGCGTATCGTCAATGGGCGCAAGCCTATCATCCCGATAAATACCAAGCTCCTCACATGAAGGATATTGCTACGGAGAACTTTCAGCGAATATGCGAAGCGTATGAGATTCTTTCAGATCCAAATAAAAGGCAAATATATGATATCTACGGCATGGAGGGGTTGACCTCTGGTTTGGAACTTGGTCCAAAGCTTAATGGAGCTGAAGAGATCAAGGCAGAACTCGAGAGATTGAAGAGGATGAAGGAACGCGAGAAAATGGCGGCGCATTTTCAACCCTCCGGTACAATTGTGGCCAATATGTCTTTGCCACGCTATCTAGACGGAAATGGCATGCTCAGAGGAATGGCTATGACAAGTGAAATCCAGTCTCAGTTATCAAAGCGTAATGCTGTTACGATTGGTGGTAATTTAGCAGTGAATGGAGAGGAAGGCGGTGGAGCTGCTACTGCTGTATTTAGGCATCATCTTTCAGAAGTTTCGTCAGTAGAGGTTGTGGCCTCAGCTGGTCTGCGTGCACTAATTGGGGTGCAAACAACTCGTAATCTATCATCACACTCAGCTGCAACAATGGGCATAGCACTGTCTCTGAAAGACGGTTCATTGAATCTTTCAAATTTATGGACCCGCCAACTGTCAGAAACAGCAAGTGGACATATAGAGCTTGCTTTGGGGCCACATTCATCTGTAACTGTTGGGTGGCAAAAGAAAGATCAGAGAAGGTCTGCCTCTGGAGAAGTGAAGTTTGGCACAGGTTCTTTTGAGACATCAGTTCATTATACTCATCGTTTTTCTCCTAAATCTCTTGGCTGCATTGTGGGAAGAGTTGGGAGTTCTTCCCTTGAGGTTGAAGTCGGTGGTGGGAGGAAGCTATCCAAATTCAGCTCGGTACGCTGGTTGTATATAATAGGAATTCAGGGTATTTCCTGGAAATTTGAGCTGTATCGTGGGGGTCAGAAGTTAATTATTCCTATTTTGCTGACAAGACATCTGAACCCTGTGTTTGCTACTGGAGCATTTGTCGTTCCTGCATCTCTTTACTTTGTTCTAAAGAAACTTTTTATTAAACCTTATTACCTTAGAAGGAATAAACAGAAGGCTCTGGAGGAGAAGGAGAAAACTTCTGCTCAGGTTAAGGAAGCACGAGCTACAGCAGAGAAAGCTCAGAATTTACAACAAAATGTGGCTAATAGGAAAAGAAACAAGCAATTAGAAACAGGTGGACTGGTTATTATGAGAGCACTATATGGAAATCAGAGAATTTTGAACAACTTAAAGTCATCAAGTGAAACAAGTTTTGAATTAACTTCAGAAGTCATTGATGTTACAATACCTTTGAATTTTCTAGTTAATGATTCTGGCCAACTCAAGCTTCATGAAGGTGTAAAAAAATCAGGCATCATGGGTTTCTGTGATCCATGTCCAGGAAGTCCTAAAGACTTGTATGTAGAGTACGTCTATGCTGGCAATCAATACAGGGTTTGGGCTGGTGATTATGAAGAATTACAGATCCCTCAGGGCAGCCACAGGATATAA

>Glyma.01g209800.2 sequence-type=CDS polypeptide=Glyma.01g209800.2.p locus=Glyma.01g209800 ID=Glyma.01g209800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACGAACCGAACGAAGCACAAGACAACAGAGAACTCTACGCGCTCTTGAATTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAGAGCGTATCGTCAATGGGCGCAAGCCTATCATCCCGATAAATACCAAGCTCCTCACATGAAGGATATTGCTACGGAGAACTTTCAGCGAATATGCGAAGCGTATGAGATTCTTTCAGATCCAAATAAAAGGCAAATATATGATATCTACGGCATGGAGGGGTTGACCTCTGGTTTGGAACTTGGTCCAAAGCTTAATGGAGCTGAAGAGATCAAGGCAGAACTCGAGAGATTGAAGAGGATGAAGGAACGCGAGAAAATGGCGGCGCATTTTCAACCCTCCGGTACAATTGTGGCCAATATGTCTTTGCCACGCTATCTAGACGGAAATGGCATGCTCAGAGGAATGGCTATGACAAGTGAAATCCAGTCTCAGTTATCAAAGCGTAATGCTGTTACGATTGGTGGTAATTTAGCAGTGAATGGAGAGGAAGGCGGTGGAGCTGCTACTGCTGTATTTAGGCATCATCTTTCAGAAGTTTCGTCAGTAGAGGTTGTGGCCTCAGCTGGTCTGCGTGCACTAATTGGGGTGCAAACAACTCGTAATCTATCATCACACTCAGCTGCAACAATGGGCATAGCACTGTCTCTGAAAGACGGTTCATTGAATCTTTCAAATTTATGGACCCGCCAACTGTCAGAAACAGCAAGTGGACATATAGAGCTTGCTTTGGGGCCACATTCATCTGTAACTGTTGGGTGGCAAAAGAAAGATCAGAGAAGGTCTGCCTCTGGAGAAGTGAAGTTTGGCACAGGTTCTTTTGAGACATCAGTTCATTATACTCATCGTTTTTCTCCTAAATCTCTTGGCTGCATTGTGGGAAGAGTTGGGAGTTCTTCCCTTGAGGTTGAAGTCGGTGGTGGGAGGAAGCTATCCAAATTCAGCTCGGTACGCTGGTTGTATATAATAGGAATTCAGGGTATTTCCTGGAAATTTGAGCTGTATCGTGGGGGTCAGAAGTTAATTATTCCTATTTTGCTGACAAGACATCTGAACCCTGTGTTTGCTACTGGAGCATTTGTCGTTCCTGCATCTCTTTACTTTGTTCTAAAGAAACTTTTTATTAAACCTTATTACCTTAGAAGGAATAAACAGAAGGCTCTGGAGGAGAAGGAGAAAACTTCTGCTCAGGTTAAGGAAGCACGAGCTACAGCAGAGAAAGCTCAGAATTTACAACAAAATGTGGCTAATAGGAAAAGAAACAAGCAATTAGAAACAGGTGGACTGGTTATTATGAGAGCACTATATGGAAATCAGAGAATTTTGAACAACTTAAAGTCATCAAGTGAAACAAGTTTTGAATTAACTTCAGAAGTCATTGATGTTACAATACCTTTGAATTTTCTAGTTAATGATTCTGGCCAACTCAAGCTTCATGAAGGTGTAAAAAAATCAGGCATCATGGGTTTCTGTGATCCATGTCCAGGAAGTCCTAAAGACTTGTATGTAGAGTACGTCTATGCTGGCAATCAATACAGGGTATTACCAGTTGCTTGTTATGATTCAAAATTGTTATAA

Predicted protein sequences of Glyma.01g209800

Limit To All Plant Sequences

>Glyma.01g209800.1.p sequence-type=predicted peptide transcript=Glyma.01g209800.1 locus=Glyma.01g209800 ID=Glyma.01g209800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDEPNEAQDNRELYALLNLSPEASDEEIRRAYRQWAQAYHPDKYQAPHMKDIATENFQRICEAYEILSDPNKRQIYDIYGMEGLTSGLELGPKLNGAEEIKAELERLKRMKEREKMAAHFQPSGTIVANMSLPRYLDGNGMLRGMAMTSEIQSQLSKRNAVTIGGNLAVNGEEGGGAATAVFRHHLSEVSSVEVVASAGLRALIGVQTTRNLSSHSAATMGIALSLKDGSLNLSNLWTRQLSETASGHIELALGPHSSVTVGWQKKDQRRSASGEVKFGTGSFETSVHYTHRFSPKSLGCIVGRVGSSSLEVEVGGGRKLSKFSSVRWLYIIGIQGISWKFELYRGGQKLIIPILLTRHLNPVFATGAFVVPASLYFVLKKLFIKPYYLRRNKQKALEEKEKTSAQVKEARATAEKAQNLQQNVANRKRNKQLETGGLVIMRALYGNQRILNNLKSSSETSFELTSEVIDVTIPLNFLVNDSGQLKLHEGVKKSGIMGFCDPCPGSPKDLYVEYVYAGNQYRVWAGDYEELQIPQGSHRI*

>Glyma.01g209800.2.p sequence-type=predicted peptide transcript=Glyma.01g209800.2 locus=Glyma.01g209800 ID=Glyma.01g209800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDEPNEAQDNRELYALLNLSPEASDEEIRRAYRQWAQAYHPDKYQAPHMKDIATENFQRICEAYEILSDPNKRQIYDIYGMEGLTSGLELGPKLNGAEEIKAELERLKRMKEREKMAAHFQPSGTIVANMSLPRYLDGNGMLRGMAMTSEIQSQLSKRNAVTIGGNLAVNGEEGGGAATAVFRHHLSEVSSVEVVASAGLRALIGVQTTRNLSSHSAATMGIALSLKDGSLNLSNLWTRQLSETASGHIELALGPHSSVTVGWQKKDQRRSASGEVKFGTGSFETSVHYTHRFSPKSLGCIVGRVGSSSLEVEVGGGRKLSKFSSVRWLYIIGIQGISWKFELYRGGQKLIIPILLTRHLNPVFATGAFVVPASLYFVLKKLFIKPYYLRRNKQKALEEKEKTSAQVKEARATAEKAQNLQQNVANRKRNKQLETGGLVIMRALYGNQRILNNLKSSSETSFELTSEVIDVTIPLNFLVNDSGQLKLHEGVKKSGIMGFCDPCPGSPKDLYVEYVYAGNQYRVLPVACYDSKLL*

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