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Report for Sequence Feature Glyma.01g207800

Feature Type:gene_model
Chromosome:Gm01
Start:53963309
stop:53969929
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G16700.1AT phosphatidylserine decarboxylase 1 JGI N/AIEA
GO:0006629GO-bp lipid metabolic process EnsemblGenomesN/AIEA
GO:0006646GO-bp phosphatidylethanolamine biosynthetic process EnsemblGenomesN/AIEA
GO:0008654GO-bp phospholipid biosynthetic process EnsemblGenomesN/AIEA
GO:0008654GO-bp phospholipid biosynthetic process JGI N/AIEA
GO:0016540GO-bp protein autoprocessing EnsemblGenomesN/AIEA
GO:0005739GO-cc mitochondrion EnsemblGenomesN/AIEA
GO:0005743GO-cc mitochondrial inner membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0031305GO-cc integral component of mitochondrial inner membrane EnsemblGenomesN/AIEA
GO:0004609GO-mf phosphatidylserine decarboxylase activity EnsemblGenomesN/AIEA
GO:0004609GO-mf phosphatidylserine decarboxylase activity JGI N/AIEA
GO:0016829GO-mf lyase activity EnsemblGenomesN/AIEA
GO:0016831GO-mf carboxy-lyase activity EnsemblGenomesN/AIEA
KOG2420 KOG Phosphatidylserine decarboxylase JGI N/AIEA
PTHR10067Panther PHOSPHATIDYLSERINE DECARBOXYLASE JGI N/AIEA
PF02666PFAM Phosphatidylserine decarboxylase JGI N/AIEA
PHOSLIPSYN2-PWYSoyCyc9 superpathway of phospholipid biosynthesis II (plants) Plant Metabolic Network ISS
PWY-5669SoyCyc9 phosphatidylethanolamine biosynthesis I Plant Metabolic Network ISS
GN7V-63770SoyCyc9-rxn phosphatidylserine decarboxylase Plant Metabolic Network ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.01g207800 not represented in the dataset

Glyma.01g207800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE


View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.



View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Corresponding NameAnnotation VersionEvidenceComments
Glyma01g41630 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.01g207800.1 sequence-type=CDS polypeptide=Glyma.01g207800.1.p locus=Glyma.01g207800 ID=Glyma.01g207800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAATATAGGGTTTCGCACAAGTTCCCTGTGCTTCCTCGCCACACTCGTCCCTTTAACCACACTCGCTACTTCACTTCCTTCGCCAAGAAGTTCCAAACACCTCAACCTCGGGCTTCTATCAATGCCGGAGGAAGTGGAAATTCTCAAGGGAATTCTTTTGTTGTACCTGGAGCAACAGTTGCTACCATACTTATGCTTGGTGTTCTCCATGCCCGCCGACTCTACGAGGACAAGAAGACTGAACAGATGAAGGAGAAGGGAATCGAAATAGAATTCCAACCTGATGCAAAGGCTACATTTTTGAGATTACTGCCTCTGCGTTCAATTTCTAGATGTTGGGGATACTTGACAAGCATGGAAATACCTGTTTGGCTAAGGCCCCATATCTATAAAGCGTGGGCTCGAGCATTCCATTCAAATTTAGAAGAAGCTGCTTTACCTCTAGACAAATATGCCTCTTTAAGGGATTTTTTTGTTCGCACTTTGAAAGAAGGTTCCAGGCCTATTGATGTTGATCCACAGTGTCTGGTTAGTCCTGTGGACGGTACAGTTTTAAGATTTGGGGAGTTGAAGGGAGCTGGAGCAATGATTGAACAAATTAAAGGGTTTTCATATTCAGTTTTTTCTCTTCTTGGTGCAAGCCCTTTCCTTCCAACAACAGATGTGCAAGAGGAGCATAGTGAATCAATAACAACTACTGTGAAGAGCAAGAAGTCATGGTGGAGAGTTTCATTGGCTTCTCCAAAAGTGTGGAACCCAACATCATCACGCCCAAAGAAAGGCCTTTTTTACTGTGTGGTTTACTTGAAGCCTGGAGATTACCATCGGATACACTCCCCAGCTGATTGGAACATTCTTGCACGCAGGCATTTTTCTGGTCGTCTTTATCCCTTGAATGAACGTGCTACAAGAACAATTAGAAACCTCTATATTGAGAACGAGAGGGTTATTCTTGAAGGTCTATGGCAGGAAGGGTTTATGGCACTTGCTGCAATTGGTGCCACAAATATTGGGTCAATTGAGCTTTTCATTGAGCCCGAACTTCATACAAACAGGCCAAGGAAGAAGTTTCTTCATTCAGAGCCTCCTGAAGAACGGATTTATGGATGTGAAGGTGTAGGCAGAATGCTCAAGAAAGGGGATGAGTTAGGTGCTTTCAACATGGGATCAACAGTTGTGCTTGTTTTCCAAGCCCCAATTTCAAAACTCCCTGAGGGCGATTCATCTCAAGAGTTCAGGTTCTGCGTCGGCCGTGGGGATAGAATTCGTGTTGGTGAGGCTCTAGGAAGGTGGCATAGTTCGTGA

>Glyma.01g207800.1.p sequence-type=predicted peptide transcript=Glyma.01g207800.1 locus=Glyma.01g207800 ID=Glyma.01g207800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKYRVSHKFPVLPRHTRPFNHTRYFTSFAKKFQTPQPRASINAGGSGNSQGNSFVVPGATVATILMLGVLHARRLYEDKKTEQMKEKGIEIEFQPDAKATFLRLLPLRSISRCWGYLTSMEIPVWLRPHIYKAWARAFHSNLEEAALPLDKYASLRDFFVRTLKEGSRPIDVDPQCLVSPVDGTVLRFGELKGAGAMIEQIKGFSYSVFSLLGASPFLPTTDVQEEHSESITTTVKSKKSWWRVSLASPKVWNPTSSRPKKGLFYCVVYLKPGDYHRIHSPADWNILARRHFSGRLYPLNERATRTIRNLYIENERVILEGLWQEGFMALAAIGATNIGSIELFIEPELHTNRPRKKFLHSEPPEERIYGCEGVGRMLKKGDELGAFNMGSTVVLVFQAPISKLPEGDSSQEFRFCVGRGDRIRVGEALGRWHSS*







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