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Report for Sequence Feature Glyma.01g205700

Feature Type:gene_model
Chromosome:Gm01
Start:53815943
stop:53818448
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.01g205700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G35660.1AT FAD/NAD(P)-binding oxidoreductase family protein JGI N/AIEA
GO:0016117GO-bp carotenoid biosynthetic process JGI N/AIEA
GO:0044550GO-bp secondary metabolite biosynthetic process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
GO:0004497GO-mf monooxygenase activity EnsemblGenomesN/AIEA
GO:0004506GO-mf squalene monooxygenase activity JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
GO:0016705GO-mf oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen JGI N/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding JGI N/AIEA
GO:0071949GO-mf FAD binding EnsemblGenomesN/AIEA
KOG2614 KOG Kynurenine 3-monooxygenase and related flavoprotein monooxygenases JGI N/AIEA
PTHR13789Panther MONOOXYGENASE JGI N/AIEA
PTHR13789:SF6Panther JGI N/AIEA
PF01494PFAM FAD binding domain JGI N/AIEA
GN7V-46480SoyCyc9-rxn Enzyme name not determined Plant Metabolic Network ISS

Expression Patterns of Glyma.01g205700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.01g205700 not represented in the dataset
Glyma.01g205700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.01g205700
ParalogEvidenceComments
Glyma.11g037100 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.01g205700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g41430 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.01g205700
>Glyma.01g205700.2 sequence-type=transcript locus=Glyma.01g205700 ID=Glyma.01g205700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTAGATTTAAGAAACATTGACCACTAGTTTTTATGGTCCAAGGCTGGACACTACGCACCCCTATCTTTCCACGACCGTAATGCATATGATATGGCGTGGCTGCAATCAATCACAACAGAACTGAACATATCATGGCTACAACAACAACCTCGTCTTTTGCCTTTCTGAAATCTCACACTCACACCAAAACATTGTTCACCCGCAGAAGCTACAAAGCCATAAAGGCTCAATCTCAAACTGATGTCCGAGAGGAACAAGTCGTGGTAGTGGGTGCTGGGATCGCGGGCCTTGCAACTGCTCTGTCCCTTCATAGGCTTGGAGTTCGGTCCCTGGTGCTGGAGCAGGCACAGTCACTTCGAACAGGTGGAACTTCACTCACCCTTTTCAAAAACGGATGGAGGGTGCTCGATGCAATTGGAGTAGCTAATGACCTCAGAACTCAATTCTTAGAAATTCAAGGCTGAGCTTGATCTGGTTCACAATATCAGCTGTACAGGATGGTGGTGAAGTCCGTGGATGGGAGGGAACTACGCGCCTTCAATTTCAAACAAGAGGATCCAAGCCAAGAGGTACGTGCAGTGGAGAGGAGAGTGCTTTTGGAAACCTTGGCTAGTCAGCTACCTCGGGATACCATTCAATATTCTTCACAATTACAGAGGATTGAAGCCACTCCAAACGGGGATACCTTGTTGGAACTTGTGGATGGGTCTAAGCTGCTTGCAAAGATTGTGATAGGGTGCGATGGGATTCGATCACCAATAGCTAAGTGGATGGGGTTTCCTGAGCCAAAGTATGTTGGTCATTGTGCTTTCCGTGGACTTGCGTCTTATTCAGATGGACAACCTTTTGGACCAAGAGTGAATTACATCTACGGAAGAGGGTTGCGCGCTGGATTTGTTCCTGTTTCTCCAACCAAAGTTTACTGGTTCATCTGCTTCAATAGTCCATCTGCAGGTCCAAAAATAACTGATTCATTGGAGCTGAAGAAGCAAGCTAAGGAACTGGTGAAGAATTGGCCTTCAGAGCTATTGAACATAGTGGATTCTACGCCGGATGACACTGTCATTAAGACTCCATTAGTAGATAGGTGGCTTTGGCCAGCCATAAGTCCTTCTGCTTCTGCAGGAAGAGTTGTGGTGGTTGGAGATGCATGGCATCCAATGACCCCAAATCTTGGGCAAGGAGCTTGTTGTGCACTTGAGGATTCAGTGGTTCTTGCTAAAAAGCTTGCCAGAGCCATCAATTCTGAAGACCCATCTGTGGAAGAAGCTTTCAGGTCATATGGCGCTGAAAGATGGCCCCGTGTATTTCCACTAACCATTCGTGCAAACCTCGTAGGTTCCGTTTTGCAGTGGGAGAACCCATTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTCAGGCTCGGGCCATTGCTGGAGCATACAAATTTTACTTGTGAGGGTCTATAAAGAAGACAAAGCAAGGCTGGCAATGGCAAGCACAATGAAAGATGGAGTTGTCAGGGAATAGAGAGAGTTTCATTTCTGTTCAATATGGATACTGCATTTGATGGGTGTAAAGAGAGTTAGTTATGTTCGTTACTCAATAGGTTATAAACATTGTATTTAACCGATCCTTAATAAGTACATTCAACACTTTATGTGAACTTCTCCATTTTTCTGTTTCCTGATGATTGGCTTGCCAAAAGAAGATCTAGTATACTTTTACCAATTATTGGA

>Glyma.01g205700.3 sequence-type=transcript locus=Glyma.01g205700 ID=Glyma.01g205700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTAGATTTAAGAAACATTGACCACTAGTTTTTATGGTCCAAGGCTGGACACTACGCACCCCTATCTTTCCACGACCGTAATGCATATGATATGGCGTGGCTGCAATCAATCACAACAGAACTGAACATATCATGGCTACAACAACAACCTCGTCTTTTGCCTTTCTGAAATCTCACACTCACACCAAAACATTGTTCACCCGCAGAAGCTACAAAGCCATAAAGGCTCAATCTCAAACTGATGTCCGAGAGGAACAAGTCGTGGTAGTGGGTGCTGGGATCGCGGGCCTTGCAACTGCTCTGTCCCTTCATAGGCTTGGAGTTCGGTCCCTGGTGCTGGAGCAGGCACAGTCACTTCGAACAGGTGGAACTTCACTCACCCTTTTCAAAAACGGATGGAGGGTGCTCGATGCAATTGGAGTAGCTAATGACCTCAGAACTCAATTCTTAGAAATTCAAGGCTGTACAGGATGGTGGTGAAGTCCGTGGATGGGAGGGAACTACGCGCCTTCAATTTCAAACAAGAGGATCCAAGCCAAGAGGTACGTGCAGTGGAGAGGAGAGTGCTTTTGGAAACCTTGGCTAGTCAGCTACCTCGGGATACCATTCAATATTCTTCACAATTACAGAGGATTGAAGCCACTCCAAACGGGGATACCTTGTTGGAACTTGTGGATGGGTCTAAGCTGCTTGCAAAGATTGTGATAGGGTGCGATGGGATTCGATCACCAATAGCTAAGTGGATGGGGTTTCCTGAGCCAAAGTATGTTGGTCATTGTGCTTTCCGTGGACTTGCGTCTTATTCAGATGGACAACCTTTTGGACCAAGAGTGAATTACATCTACGGAAGAGGGTTGCGCGCTGGATTTGTTCCTGTTTCTCCAACCAAAGTTTACTGGTTCATCTGCTTCAATAGTCCATCTGCAGGTCCAAAAATAACTGATTCATTGGAGCTGAAGAAGCAAGCTAAGGAACTGGTGAAGAATTGGCCTTCAGAGCTATTGAACATAGTGGATTCTACGCCGGATGACACTGTCATTAAGACTCCATTAGTAGATAGGTGGCTTTGGCCAGCCATAAGTCCTTCTGCTTCTGCAGGAAGAGTTGTGGTGGTTGGAGATGCATGGCATCCAATGACCCCAAATCTTGGGCAAGGAGCTTGTTGTGCACTTGAGGATTCAGTGGTTCTTGCTAAAAAGCTTGCCAGAGCCATCAATTCTGAAGACCCATCTGTGGAAGAAGCTTTCAGGTCATATGGCGCTGAAAGATGGCCCCGTGTATTTCCACTAACCATTCGTGCAAACCTCGTAGGTTCCGTTTTGCAGTGGGAGAACCCATTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTCAGGCTCGGGCCATTGCTGGAGCATACAAATTTTACTTGTGAGGGTCTATAAAGAAGACAAAGCAAGGCTGGCAATGGCAAGCACAATGAAAGATGGAGTTGTCAGGGAATAGAGAGAGTTTCATTTCTGTTCAATATGGATACTGCATTTGATGGGTGTAAAGAGAGTTAGTTATGTTCGTTACTCAATAGGTTATAAACATTGTATTTAACCGATCCTTAATAAGTACATTCAACACTTTATGTGAACTTCTCCATTTTTCTGTTTCCTGATGATTGGCTTGCCAAAAGAAGATCTAGTATACTTTTACCAATTATTGGA
Coding sequences of Glyma.01g205700
>Glyma.01g205700.1 sequence-type=CDS polypeptide=Glyma.01g205700.1.p locus=Glyma.01g205700 ID=Glyma.01g205700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTACAACAACAACCTCGTCTTTTGCCTTTCTGAAATCTCACACTCACACCAAAACATTGTTCACCCGCAGAAGCTACAAAGCCATAAAGGCTCAATCTCAAACTGATGTCCGAGAGGAACAAGTCGTGGTAGTGGGTGCTGGGATCGCGGGCCTTGCAACTGCTCTGTCCCTTCATAGGCTTGGAGTTCGGTCCCTGGTGCTGGAGCAGGCACAGTCACTTCGAACAGGTGGAACTTCACTCACCCTTTTCAAAAACGGATGGAGGGTGCTCGATGCAATTGGAGTAGCTAATGACCTCAGAACTCAATTCTTAGAAATTCAAGGGATGGTGGTGAAGTCCGTGGATGGGAGGGAACTACGCGCCTTCAATTTCAAACAAGAGGATCCAAGCCAAGAGGTACGTGCAGTGGAGAGGAGAGTGCTTTTGGAAACCTTGGCTAGTCAGCTACCTCGGGATACCATTCAATATTCTTCACAATTACAGAGGATTGAAGCCACTCCAAACGGGGATACCTTGTTGGAACTTGTGGATGGGTCTAAGCTGCTTGCAAAGATTGTGATAGGGTGCGATGGGATTCGATCACCAATAGCTAAGTGGATGGGGTTTCCTGAGCCAAAGTATGTTGGTCATTGTGCTTTCCGTGGACTTGCGTCTTATTCAGATGGACAACCTTTTGGACCAAGAGTGAATTACATCTACGGAAGAGGGTTGCGCGCTGGATTTGTTCCTGTTTCTCCAACCAAAGTTTACTGGTTCATCTGCTTCAATAGTCCATCTGCAGGTCCAAAAATAACTGATTCATTGGAGCTGAAGAAGCAAGCTAAGGAACTGGTGAAGAATTGGCCTTCAGAGCTATTGAACATAGTGGATTCTACGCCGGATGACACTGTCATTAAGACTCCATTAGTAGATAGGTGGCTTTGGCCAGCCATAAGTCCTTCTGCTTCTGCAGGAAGAGTTGTGGTGGTTGGAGATGCATGGCATCCAATGACCCCAAATCTTGGGCAAGGAGCTTGTTGTGCACTTGAGGATTCAGTGGTTCTTGCTAAAAAGCTTGCCAGAGCCATCAATTCTGAAGACCCATCTGTGGAAGAAGCTTTCAGGTCATATGGCGCTGAAAGATGGCCCCGTGTATTTCCACTAACCATTCGTGCAAACCTCGTAGGTTCCGTTTTGCAGTGGGAGAACCCATTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTCAGGCTCGGGCCATTGCTGGAGCATACAAATTTTACTTGTGAGGGTCTATAA

>Glyma.01g205700.2 sequence-type=CDS polypeptide=Glyma.01g205700.2.p locus=Glyma.01g205700 ID=Glyma.01g205700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGTGAAGTCCGTGGATGGGAGGGAACTACGCGCCTTCAATTTCAAACAAGAGGATCCAAGCCAAGAGGTACGTGCAGTGGAGAGGAGAGTGCTTTTGGAAACCTTGGCTAGTCAGCTACCTCGGGATACCATTCAATATTCTTCACAATTACAGAGGATTGAAGCCACTCCAAACGGGGATACCTTGTTGGAACTTGTGGATGGGTCTAAGCTGCTTGCAAAGATTGTGATAGGGTGCGATGGGATTCGATCACCAATAGCTAAGTGGATGGGGTTTCCTGAGCCAAAGTATGTTGGTCATTGTGCTTTCCGTGGACTTGCGTCTTATTCAGATGGACAACCTTTTGGACCAAGAGTGAATTACATCTACGGAAGAGGGTTGCGCGCTGGATTTGTTCCTGTTTCTCCAACCAAAGTTTACTGGTTCATCTGCTTCAATAGTCCATCTGCAGGTCCAAAAATAACTGATTCATTGGAGCTGAAGAAGCAAGCTAAGGAACTGGTGAAGAATTGGCCTTCAGAGCTATTGAACATAGTGGATTCTACGCCGGATGACACTGTCATTAAGACTCCATTAGTAGATAGGTGGCTTTGGCCAGCCATAAGTCCTTCTGCTTCTGCAGGAAGAGTTGTGGTGGTTGGAGATGCATGGCATCCAATGACCCCAAATCTTGGGCAAGGAGCTTGTTGTGCACTTGAGGATTCAGTGGTTCTTGCTAAAAAGCTTGCCAGAGCCATCAATTCTGAAGACCCATCTGTGGAAGAAGCTTTCAGGTCATATGGCGCTGAAAGATGGCCCCGTGTATTTCCACTAACCATTCGTGCAAACCTCGTAGGTTCCGTTTTGCAGTGGGAGAACCCATTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTCAGGCTCGGGCCATTGCTGGAGCATACAAATTTTACTTGTGAGGGTCTATAA

>Glyma.01g205700.3 sequence-type=CDS polypeptide=Glyma.01g205700.3.p locus=Glyma.01g205700 ID=Glyma.01g205700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGTGAAGTCCGTGGATGGGAGGGAACTACGCGCCTTCAATTTCAAACAAGAGGATCCAAGCCAAGAGGTACGTGCAGTGGAGAGGAGAGTGCTTTTGGAAACCTTGGCTAGTCAGCTACCTCGGGATACCATTCAATATTCTTCACAATTACAGAGGATTGAAGCCACTCCAAACGGGGATACCTTGTTGGAACTTGTGGATGGGTCTAAGCTGCTTGCAAAGATTGTGATAGGGTGCGATGGGATTCGATCACCAATAGCTAAGTGGATGGGGTTTCCTGAGCCAAAGTATGTTGGTCATTGTGCTTTCCGTGGACTTGCGTCTTATTCAGATGGACAACCTTTTGGACCAAGAGTGAATTACATCTACGGAAGAGGGTTGCGCGCTGGATTTGTTCCTGTTTCTCCAACCAAAGTTTACTGGTTCATCTGCTTCAATAGTCCATCTGCAGGTCCAAAAATAACTGATTCATTGGAGCTGAAGAAGCAAGCTAAGGAACTGGTGAAGAATTGGCCTTCAGAGCTATTGAACATAGTGGATTCTACGCCGGATGACACTGTCATTAAGACTCCATTAGTAGATAGGTGGCTTTGGCCAGCCATAAGTCCTTCTGCTTCTGCAGGAAGAGTTGTGGTGGTTGGAGATGCATGGCATCCAATGACCCCAAATCTTGGGCAAGGAGCTTGTTGTGCACTTGAGGATTCAGTGGTTCTTGCTAAAAAGCTTGCCAGAGCCATCAATTCTGAAGACCCATCTGTGGAAGAAGCTTTCAGGTCATATGGCGCTGAAAGATGGCCCCGTGTATTTCCACTAACCATTCGTGCAAACCTCGTAGGTTCCGTTTTGCAGTGGGAGAACCCATTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTCAGGCTCGGGCCATTGCTGGAGCATACAAATTTTACTTGTGAGGGTCTATAA
Predicted protein sequences of Glyma.01g205700
>Glyma.01g205700.1.p sequence-type=predicted peptide transcript=Glyma.01g205700.1 locus=Glyma.01g205700 ID=Glyma.01g205700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MATTTTSSFAFLKSHTHTKTLFTRRSYKAIKAQSQTDVREEQVVVVGAGIAGLATALSLHRLGVRSLVLEQAQSLRTGGTSLTLFKNGWRVLDAIGVANDLRTQFLEIQGMVVKSVDGRELRAFNFKQEDPSQEVRAVERRVLLETLASQLPRDTIQYSSQLQRIEATPNGDTLLELVDGSKLLAKIVIGCDGIRSPIAKWMGFPEPKYVGHCAFRGLASYSDGQPFGPRVNYIYGRGLRAGFVPVSPTKVYWFICFNSPSAGPKITDSLELKKQAKELVKNWPSELLNIVDSTPDDTVIKTPLVDRWLWPAISPSASAGRVVVVGDAWHPMTPNLGQGACCALEDSVVLAKKLARAINSEDPSVEEAFRSYGAERWPRVFPLTIRANLVGSVLQWENPLVCSVRNNIVIPKLVRLGPLLEHTNFTCEGL*

>Glyma.01g205700.2.p sequence-type=predicted peptide transcript=Glyma.01g205700.2 locus=Glyma.01g205700 ID=Glyma.01g205700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVVKSVDGRELRAFNFKQEDPSQEVRAVERRVLLETLASQLPRDTIQYSSQLQRIEATPNGDTLLELVDGSKLLAKIVIGCDGIRSPIAKWMGFPEPKYVGHCAFRGLASYSDGQPFGPRVNYIYGRGLRAGFVPVSPTKVYWFICFNSPSAGPKITDSLELKKQAKELVKNWPSELLNIVDSTPDDTVIKTPLVDRWLWPAISPSASAGRVVVVGDAWHPMTPNLGQGACCALEDSVVLAKKLARAINSEDPSVEEAFRSYGAERWPRVFPLTIRANLVGSVLQWENPLVCSVRNNIVIPKLVRLGPLLEHTNFTCEGL*

>Glyma.01g205700.3.p sequence-type=predicted peptide transcript=Glyma.01g205700.3 locus=Glyma.01g205700 ID=Glyma.01g205700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVVKSVDGRELRAFNFKQEDPSQEVRAVERRVLLETLASQLPRDTIQYSSQLQRIEATPNGDTLLELVDGSKLLAKIVIGCDGIRSPIAKWMGFPEPKYVGHCAFRGLASYSDGQPFGPRVNYIYGRGLRAGFVPVSPTKVYWFICFNSPSAGPKITDSLELKKQAKELVKNWPSELLNIVDSTPDDTVIKTPLVDRWLWPAISPSASAGRVVVVGDAWHPMTPNLGQGACCALEDSVVLAKKLARAINSEDPSVEEAFRSYGAERWPRVFPLTIRANLVGSVLQWENPLVCSVRNNIVIPKLVRLGPLLEHTNFTCEGL*






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