SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g202200

Feature Type:gene_model
Chromosome:Gm01
Start:54619782
stop:54620789
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g202200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G45760.1AT BAL,BAP2 JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
PTHR32246PantherFam INGRESSION PROTEIN FIC1 JGI N/AIEA
PTHR32246:SF20PantherFam C2 DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF00168Pfam C2 domain JGI N/AIEA

Proteins Associated with Glyma.01g202200
LocusGene SymbolProtein Name
C2-2 C2 domain containing protein gene 2

Gene model name correspondences to Glyma.01g202200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g41070 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g202200
>Glyma.01g202200.1 sequence-type=CDS polypeptide=Glyma.01g202200.1.p locus=Glyma.01g202200 id=Glyma.01g202200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCAAGAACTGTAGAGATGACAATTTTGTCCGCAGAAAACCTCCAAATGAATAGAAAATCCATTAGAGGAAGCACATTTGTGACGGTTCAATCCGACACTAGCAGCGACACAAGTGCTGCTACCAAAGTGGATTCAGAGGGTGGAAGTTACCCTTCGTGGAATGAGAAGGTTGTGATGGACGTGCCATTGCATGCAAGGTTCATAACCGTTGAAGTGAAGTGCAAAACGTCATCATCAGGGTCTAACAGTGTTGGCGTGGCACAAATTCCGGTTTCTGATTTCATTGGAGGGTATATGCCCGAAAACCAATTGCATTTCTTGAGCTATAGGTTGTGGGACGGCAAAGTTAGGAGAAATGGGGTTATAAACATTTCGGTGAGGGTGAAAGTGGCTGAACATTCTTCTTGTAATTTGAATTCTATGTCATTGTCAGCGGTAACTGGGGTGCCGGTGGCCGGTAATGGCCCCACTGGAGTTGTCACAGGGATTCCAGCTGTTTGGTTAAACTACCAAAGAAATCTTTGA
Predicted protein sequences of Glyma.01g202200
>Glyma.01g202200.1.p sequence-type=predicted peptide transcript=Glyma.01g202200.1 locus=Glyma.01g202200 id=Glyma.01g202200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSRTVEMTILSAENLQMNRKSIRGSTFVTVQSDTSSDTSAATKVDSEGGSYPSWNEKVVMDVPLHARFITVEVKCKTSSSGSNSVGVAQIPVSDFIGGYMPENQLHFLSYRLWDGKVRRNGVINISVRVKVAEHSSCNLNSMSLSAVTGVPVAGNGPTGVVTGIPAVWLNYQRNL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo