SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.01g188700

Feature Type:gene_model
Chromosome:Gm01
Start:53508489
stop:53512402
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g188700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G42240.1AT JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
KOG1457 KOG RNA binding protein (contains RRM repeats) JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Gene model name correspondences to Glyma.01g188700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g39560 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g188700
>Glyma.01g188700.1 sequence-type=CDS polypeptide=Glyma.01g188700.1.p locus=Glyma.01g188700 id=Glyma.01g188700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGCCTACTACTCACAGCCCCAACCGTCGGACCTTCTCTCTTACCAGTACTATCAACCGCCGCCTCCGCCGCTTCCGCCGCTGATGGCGGTGGTGCCACCTCCCCCCGGCGCGGTTGTCCAGCCGGCGCACCACGTCCATCCGTCGTACATGGCTCAGCATCAAGCGGTGTTCGCTTCATACGGTGTTTCCCAATCCTCCACACACGAGGTTCGCACTCTATTCGTCGCTGGCCTCCCTGAAGACGTCAAACCCCGCGAAATCTACAACCTGTTCCGCGAATTTCCCGATTACGAGTCTTCGCATCTTCGGAGCCCCTCCAATTCGTCGCAGCCTTTTGCTTTCGCTGTGTTCGCGAGTCAGCAGTCAGCAATCATGGCAAAGCATGCTCTGAATGGACTGGTGTTTGATCTTGAAAAGGGTTCCATTCTTTATATTGATCTGGCAAAATCAAACTCTAGATCTAAACGCACAAGGATAGATGACGAGAGGGCTGGCGCGGATAAGAAAGCTAGAGGCCTTACACCATCATGGGCCACTCCTGATTCTGCAGGTGTTGGCAGCATTCACATGCCAGGAATGGGTAATCCTGCTTTCAACACGAACATGTTTGGTTATCCATCTGCACAAAGTCTTGGGAATGCTGATGGGAGTACCATGAGTGGCGGTCTATTTGCGAATCTGAAGAAGTCTTCTACTCCTTACGTTCCTCAAAACTCAACCCCATGTGCAACTTTATTTGTAGCTAATCTGGGGTCGTCTTGTAATGAACAAGAGCTAATCCAAGTGTTTTCTAGATACCCTGGGTTTTTGAAACTGAAGATGCAGAGCACGTACGGGGCTCCAGTTGCATTTGTTGATTTCCAGGATGTTGGTAGCTCAACTGACGCTCTAAACAGTCTGCAAGGCACAATTCTTCACTCCTCACAATCTGGCGAGGGAATGCGTGTAGAATATGCTAAATCGCGTATGGGCATGCGGAAGAAGCCCAATAGATAA

>Glyma.01g188700.2 sequence-type=CDS polypeptide=Glyma.01g188700.2.p locus=Glyma.01g188700 id=Glyma.01g188700.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGCCTACTACTCACAGCCCCAACCGTCGGACCTTCTCTCTTACCAGTACTATCAACCGCCGCCTCCGCCGCTTCCGCCGCTGATGGCGGTGGTGCCACCTCCCCCCGGCGCGGTTGTCCAGCCGGCGCACCACGTCCATCCGTCGTACATGGCTCAGCATCAAGCGGTGTTCGCTTCATACGGTGTTTCCCAATCCTCCACACACGAGGTTCGCACTCTATTCGTCGCTGGCCTCCCTGAAGACGTCAAACCCCGCGAAATCTACAACCTGTTCCGCGAATTTCCCGATTACGAGTCTTCGCATCTTCGGAGCCCCTCCAATTCGTCGCAGCCTTTTGCTTTCGCTGTGTTCGCGAGTCAGCAGTCAGCAATCATGGCAAAGCATGCTCTGAATGGACTGGTGTTTGATCTTGAAAAGGGTTCCATTCTTTATATTGATCTGGCAAAATCAAACTCTAGATCTAAACGCACAAGGATAGATGACGAGAGGGCTGGCGCGGATAAGAAAGCTAGAGGCCTTACACCATCATGGGCCACTCCTGATTCTGGTGTTGGCAGCATTCACATGCCAGGAATGGGTAATCCTGCTTTCAACACGAACATGTTTGGTTATCCATCTGCACAAAGTCTTGGGAATGCTGATGGGAGTACCATGAGTGGCGGTCTATTTGCGAATCTGAAGAAGTCTTCTACTCCTTACGTTCCTCAAAACTCAACCCCATGTGCAACTTTATTTGTAGCTAATCTGGGGTCGTCTTGTAATGAACAAGAGCTAATCCAAGTGTTTTCTAGATACCCTGGGTTTTTGAAACTGAAGATGCAGAGCACGTACGGGGCTCCAGTTGCATTTGTTGATTTCCAGGATGTTGGTAGCTCAACTGACGCTCTAAACAGTCTGCAAGGCACAATTCTTCACTCCTCACAATCTGGCGAGGGAATGCGTGTAGAATATGCTAAATCGCGTATGGGCATGCGGAAGAAGCCCAATAGATAA

>Glyma.01g188700.3 sequence-type=CDS polypeptide=Glyma.01g188700.3.p locus=Glyma.01g188700 id=Glyma.01g188700.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGCCTACTACTCACAGCCCCAACCGTCGGACCTTCTCTCTTACCAGTACTATCAACCGCCGCCTCCGCCGCTTCCGCCGCTGATGGCGGTGGTGCCACCTCCCCCCGGCGCGGTTGTCCAGCCGGCGCACCACGTCCATCCGTCGTACATGGCTCAGCATCAAGCGGTGTTCGCTTCATACGGTGTTTCCCAATCCTCCACACACGAGGTTCGCACTCTATTCGTCGCTGGCCTCCCTGAAGACGTCAAACCCCGCGAAATCTACAACCTGTTCCGCGAATTTCCCGATTACGAGTCTTCGCATCTTCGGAGCCCCTCCAATTCGTCGCAGCCTTTTGCTTTCGCTGTGTTCGCGAGTCAGCAGTCAGCAATCATGGCAAAGCATGCTCTGAATGGACTGGTGTTTGATCTTGAAAAGGGTTCCATTCTTTATATTGATCTGGCAAAATCAAACTCTAGATCTAAACGCACAAGGATAGATGACGAGAGGGCTGGCGCGGATAAGAAAGCTAGAGGCCTTACACCATCATGGGCCACTCCTGATTCTGGTGTTGGCAGCATTCACATGCCAGGAATGGGTAATCCTGCTTTCAACACGAACATGTTTGGTTATCCATCTGCACAAAGTCTTGGGAATGCTGATGGGAGTACCATGAGTGGCGGTCTATTTGCGAATCTGAAGTCTTCTACTCCTTACGTTCCTCAAAACTCAACCCCATGTGCAACTTTATTTGTAGCTAATCTGGGGTCGTCTTGTAATGAACAAGAGCTAATCCAAGTGTTTTCTAGATACCCTGGGTTTTTGAAACTGAAGATGCAGAGCACGTACGGGGCTCCAGTTGCATTTGTTGATTTCCAGGATGTTGGTAGCTCAACTGACGCTCTAAACAGTCTGCAAGGCACAATTCTTCACTCCTCACAATCTGGCGAGGGAATGCGTGTAGAATATGCTAAATCGCGTATGGGCATGCGGAAGAAGCCCAATAGATAA
Predicted protein sequences of Glyma.01g188700
>Glyma.01g188700.1.p sequence-type=predicted peptide transcript=Glyma.01g188700.1 locus=Glyma.01g188700 id=Glyma.01g188700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAAYYSQPQPSDLLSYQYYQPPPPPLPPLMAVVPPPPGAVVQPAHHVHPSYMAQHQAVFASYGVSQSSTHEVRTLFVAGLPEDVKPREIYNLFREFPDYESSHLRSPSNSSQPFAFAVFASQQSAIMAKHALNGLVFDLEKGSILYIDLAKSNSRSKRTRIDDERAGADKKARGLTPSWATPDSAGVGSIHMPGMGNPAFNTNMFGYPSAQSLGNADGSTMSGGLFANLKKSSTPYVPQNSTPCATLFVANLGSSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNSLQGTILHSSQSGEGMRVEYAKSRMGMRKKPNR*

>Glyma.01g188700.2.p sequence-type=predicted peptide transcript=Glyma.01g188700.2 locus=Glyma.01g188700 id=Glyma.01g188700.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAAYYSQPQPSDLLSYQYYQPPPPPLPPLMAVVPPPPGAVVQPAHHVHPSYMAQHQAVFASYGVSQSSTHEVRTLFVAGLPEDVKPREIYNLFREFPDYESSHLRSPSNSSQPFAFAVFASQQSAIMAKHALNGLVFDLEKGSILYIDLAKSNSRSKRTRIDDERAGADKKARGLTPSWATPDSGVGSIHMPGMGNPAFNTNMFGYPSAQSLGNADGSTMSGGLFANLKKSSTPYVPQNSTPCATLFVANLGSSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNSLQGTILHSSQSGEGMRVEYAKSRMGMRKKPNR*

>Glyma.01g188700.3.p sequence-type=predicted peptide transcript=Glyma.01g188700.3 locus=Glyma.01g188700 id=Glyma.01g188700.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAAYYSQPQPSDLLSYQYYQPPPPPLPPLMAVVPPPPGAVVQPAHHVHPSYMAQHQAVFASYGVSQSSTHEVRTLFVAGLPEDVKPREIYNLFREFPDYESSHLRSPSNSSQPFAFAVFASQQSAIMAKHALNGLVFDLEKGSILYIDLAKSNSRSKRTRIDDERAGADKKARGLTPSWATPDSGVGSIHMPGMGNPAFNTNMFGYPSAQSLGNADGSTMSGGLFANLKSSTPYVPQNSTPCATLFVANLGSSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNSLQGTILHSSQSGEGMRVEYAKSRMGMRKKPNR*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo