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Report for Sequence Feature Glyma.01g188000

Feature Type:gene_model
Chromosome:Gm01
Start:53413207
stop:53423101
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G23380.1AT CLF,ICU1,SDG1,SET1 JGI N/AIEA
2.1.1.43EC JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K11430KEGG Chromosome and associated proteins JGI N/AIEA
PTHR22884PantherFam SET DOMAIN PROTEINS JGI N/AIEA
PF00856Pfam SET domain JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma01g39490 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.01g188000.1 sequence-type=CDS polypeptide=Glyma.01g188000.1.p locus=Glyma.01g188000 id=Glyma.01g188000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGTCGAAGCCTTCGCCTTCGCCCTCGCCCTCTTCTTCCAGATCAGAGCCTCTCGTCGATCCCTCCGCGAATAAAGTGGAGGGTTCAAGTCCGACTGCTAAAGATGTGCTGCTGGTTATTGATTCTTTGAAGAAACAAGTTGCTGCAGAACGAGTTGTTTATGTAAAGAAAAGAATAGAGGAAAACAGACAGAAGCTGGTTGGTGTCACTAACCATCTCTGCACAATGTCAACGGAGAGAAGGAACTGCAGCATTACTGATACGAATAGAAGTCTGGACCTACTGACAAAGAGGCAAAAAGATGCAATTGATATGCACAATGGTGTTCATGCGAGTAATGGTGACGTGGAGAGCAACGGCTATCATGATGATAACCATGGTTCTACAGCAGTTCTTCTAGGGTCTAATGTTGCCGTAAAGAATGCTGTTCGTCCCATCAAGTTACCTGAAGTAAAAAAATTGCCTCCTTACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACCGAGGATCAGTCAGTTGTAGGCCGGAGACGAATTTATTATGATCAGAATGGTGGAGAAGCACTGATTTGCAGTGACAGTGAAGAGGAAACTATGGATGATGAAGAGGAGAAAAGAGAATTCATAGAATCAGAAGATTATATACTTCGCATGACTGTCAAAGAGTTTGGTTTAACTGACATTGTTCTGGAGTCGTTGGCTCAGTGTTTTTCTAGAAACACCAGTGAAATTAAGGCAAAGTATGAAACCCTCAGTATTCATGACAATGCTGGCGGGTGTTCCAAGGCTGGAGATTCTGAAGAGAATTCTCAAAGTGGCAATTTTTTTCTGGAAAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAACCTCTTTTGTCGACGATGTCTTGTTTTCGATTGTAGATTACATGGATGTTCACAGGATCTTGTCTTCCCTGCTGAGAAGCAACCTACATGGAACCCTCCTGATACCGAAAATGCACCCTGTGGGCCAAATTGTTTCCGATCGGTACTTAAGTCAGAAAGATTTGCCAAAACATCCTCTGCCCAGGCTGATGAAGAGAAGTCCTCTGGTGGTGCTTTATCTAGGAAGAAGTCTTCTGCTAAGAGGCGGATAAAATGTAGCCAAAGTGAAAGTGCTTCATCTAATGCAAAGAACATATCAGAGAGTAGTGACTCAGAGAATGGTCCTGGACGAGATGCTGTCTCAGCCTCCCGCTCAGCACCTCCTAAAACTAAACCTGTGGGGAAAGGTGGAATTGGTAAAAGGAACAGTAAGCGAGTGGCAGAACGAGTCCTAGTATGCATGCAGAAACGGCAGAAGAAAACAATGGTTTCTGATTCTGATTCCATTAGTGAAGCTCTTGACCGTTCATCGAATGATATGGTCACTGACCCACATGCCATGAGCAGTGAAGACAACATGAGGAAAGAAGAGTTTGTAGATGACAATGTTTGTAAACCAGAAATCACAGATAATAAATCTTGGAAAGCTCTTGAAAAGGGGCTTTTAGAGAAAGGAATGGAGATTTTTGGTAGAAACAGTTGCTTAATAGCTAGGAATCTCTTAAATGGCCTAAAGACATGTTGGGATGTTTTCCAATACATAAATTGTGAAGATGGAAAGATGTCTGGTCCTCCTGGGGATGTTGCAAATTCCCTCATGGACTGCTATTCCAAGGGTACTAATGAAGTGAGACGAAGGTCTAGATTCTTACGTAGAAGAGGAAGAGTTCGTCGATTGAAGTACACCTGGAAATCTGCTGCTTATCATTCAATTAGGAAAAGGATTACAGAGAGAAAGGATCAGCCTTGCCGGCAGTATAATCCATGTGGTTGCCAATCGGCTTGTGGAAAGCAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTACTGTGGATGCCCCAAGAGCTGCAAGAATCGATTTCGTGGCTGTCATTGTGCTAAGAGTCAATGCAGAAGTCGTCAATGTCCATGTTTTGCTGCAGATAGGGAATGTGATCCAGATGTTTGTAGGAATTGTTGGGTCAGTTGTGGCGATGGTACACTAGGGATTCCTAGCCAAAGAGGGGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATATATCAGGTTGGGGAGCCTTCTTAAAGAATAGTGTTGGTAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTGATTTCTCATCGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTCAATTTGAACGATCAGTTTGTTCTTGATGCTTACCGAAAGGGTGATAAATTGAAGTTTGCGAACCATTCTCCTGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCCGGAGATCATAGGGTAGGCATTTTTGCCAAGGAACGGATTTGTGCCGGGGAGGAGCTGTTCTATGATTATCGTTATGAGCCAGATAGGGCTCCTGCGTGGGCTCGGAAGCCAGAGGCATCTGGATCAAAAAAAGAGGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA

>Glyma.01g188000.1.p sequence-type=predicted peptide transcript=Glyma.01g188000.1 locus=Glyma.01g188000 id=Glyma.01g188000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASKPSPSPSPSSSRSEPLVDPSANKVEGSSPTAKDVLLVIDSLKKQVAAERVVYVKKRIEENRQKLVGVTNHLCTMSTERRNCSITDTNRSLDLLTKRQKDAIDMHNGVHASNGDVESNGYHDDNHGSTAVLLGSNVAVKNAVRPIKLPEVKKLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEETMDDEEEKREFIESEDYILRMTVKEFGLTDIVLESLAQCFSRNTSEIKAKYETLSIHDNAGGCSKAGDSEENSQSGNFFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPTWNPPDTENAPCGPNCFRSVLKSERFAKTSSAQADEEKSSGGALSRKKSSAKRRIKCSQSESASSNAKNISESSDSENGPGRDAVSASRSAPPKTKPVGKGGIGKRNSKRVAERVLVCMQKRQKKTMVSDSDSISEALDRSSNDMVTDPHAMSSEDNMRKEEFVDDNVCKPEITDNKSWKALEKGLLEKGMEIFGRNSCLIARNLLNGLKTCWDVFQYINCEDGKMSGPPGDVANSLMDCYSKGTNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDISGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERICAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA*







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