SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research



Report for Sequence Feature Glyma.01g185800

Feature Type:gene_model
Chromosome:Gm01
Start:53227422
stop:53230801
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G36990.1AT AT-HSFB1,ATHSF4,HSF4,HSFB1 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
GO:0043565GO-mf sequence-specific DNA binding JGI N/AIEA
K09419KEGG Transcription factors JGI N/AIEA
PTHR10015PantherFam HEAT SHOCK TRANSCRIPTION FACTOR JGI N/AIEA
PF00447Pfam HSF-type DNA-binding JGI N/AIEA

LocusGene SymbolProtein Name
HSF-01 heat stress transcription factor 1

Corresponding NameAnnotation VersionEvidenceComments
Glyma01g39260 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.01g185800.1 sequence-type=CDS polypeptide=Glyma.01g185800.1.p locus=Glyma.01g185800 id=Glyma.01g185800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGCAACGATCGGTGCCGGCGCCGTTCTTGACGAAGACGTATCAGTTGGTGGAGGATCAGGGGACGGACCAGGTGATATCGTGGGGTGAAAGTGGGAACACTTTTGTGGTGTGGAAGCATGCGGATTTTGCAAAGGATTTGCTTCCAAAATATTTCAAGCACAACAACTTCTCCAGCTTTGTTCGACAGCTCAATACCTATGGATTCCGAAAAATTGTGCCAGACAAATGGGAATTCGCGAACGAGCATTTCAAGCGAGGGCAGAAGGAGCTTCTCTCCGAGATCAAACGCCGCAAGACCGTGCCTCAATCGTCGGCACATCCCCCGGAGGCCGGAAAGTCCGGCGGCGACGGCAACTCTCCGTTGAACTCCGGCAGCGACGACGCGGGCTCCACCTCAACCTCGTCCTCGTCCTCCGGTTCCAAGAACCAGGGATCGGTGGAAACAAACACAACGCCTTCTCACCAGTTATCGAGCGAGAACGAGAAACTGAAGAAGGATAACGAAACGCTGAGTTGCGAGCTGGCACGTGCGAGGAAGCAGTGCGATGAGCTCGTGGCTTTCCTCAGGGACCGTCTGATGGTGGGTCCCGATCAGATCGATCGCATCATGCGGCAAGGAAGTTGCGGATCTGAAAACGTGGTAGGTGAAGGCGGTGGAGGAGACTGTTTGAAACTGTTTGGTGTTTGGTTAAAAGGGGATACGCTAACAGACAAAAGAAACAACCACAAAAGAGGCCGCGAAGACCAAATGGGCTTCGGTGGGCCTCGCCTCAAGGAGTCAAAGCCCGTTGTTGACTTTGGAGCTGTAAATATCATGATGAAGAGCAACAGGGTTTGCAACTGA

>Glyma.01g185800.1.p sequence-type=predicted peptide transcript=Glyma.01g185800.1 locus=Glyma.01g185800 id=Glyma.01g185800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSQRSVPAPFLTKTYQLVEDQGTDQVISWGESGNTFVVWKHADFAKDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANEHFKRGQKELLSEIKRRKTVPQSSAHPPEAGKSGGDGNSPLNSGSDDAGSTSTSSSSSGSKNQGSVETNTTPSHQLSSENEKLKKDNETLSCELARARKQCDELVAFLRDRLMVGPDQIDRIMRQGSCGSENVVGEGGGGDCLKLFGVWLKGDTLTDKRNNHKRGREDQMGFGGPRLKESKPVVDFGAVNIMMKSNRVCN*







Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo