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Report for Sequence Feature Glyma.01g176000

Feature Type:gene_model
Chromosome:Gm01
Start:52379919
stop:52387191
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.01g176000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G36630.1AT EMB2754 JGI N/AIEA
GO:0006886GO-bp intracellular protein transport JGI N/AIEA
GO:0016192GO-bp vesicle-mediated transport JGI N/AIEA
PTHR12894PantherFam CNH DOMAIN CONTAINING JGI N/AIEA
PF00637Pfam Region in Clathrin and VPS JGI N/AIEA
PF00780Pfam CNH domain JGI N/AIEA
PF10366Pfam Vacuolar sorting protein 39 domain 1 JGI N/AIEA
PF10367Pfam Vacuolar sorting protein 39 domain 2 JGI N/AIEA

Gene model name correspondences to Glyma.01g176000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma01g38240 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.01g176000
>Glyma.01g176000.1 sequence-type=CDS polypeptide=Glyma.01g176000.1.p locus=Glyma.01g176000 id=Glyma.01g176000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCATTGTGTCCTCCTTTCCAAAAGCCAAGCTCAAGCAAGCTTAAAGTTATGTAAAAAAATAAGGGGGTGTGAGGAAATGGTGCACAGCGCGTACGATTGTCTGGAACTGGTGCGCGAGTGCCCAGCCAAGATCGAATCCATCGAATCCTACGGTTCGAAGCTTCTCGTGGGCTGCTCCGATGGATCGCTCCGAATATTCGCGCCGGAAACGGAATCTTCCTCCGACGGCTCCAAGTCCTACGCCTTGGAGAAGAACCTCGCCGGGTTCGCGAAGAAGCCCGTGCTCTCAATGACGGTGGTGGAGTCGCGAGACTTCCTCATCTCGCTCTCTGAATCCATCGCGTTCCACAGACTCCCTTTCTTCGAGACCATCGCGGTCATCACCAAGGCCAAGGGCGCTAACCTCTTTTGCTGGGACCACCGCCGTGGATTCCTCTGCTTCGCCAGGCAGAAGCGCGTTTGCATCTTCCGACACGACGGTGGCAGGGGATTTGTGGAGGTGAAAGATTTTGGTGTGGCGGATACGGTGAAGTCCATGTGTTGGTGCGGTGAGAATATATGTTTAGGGATTAGAAGAGAATATGTGATTCTGAATGCTTCAAATGGAGCTTTGTCTGAGGTTTTTACTTCTGGAAGACTAGCGCCTCCTCTGGTTGTTTCTCTTCCCTCCGGAGAGCTTCTTCTTGGAAAGGAGAATATTGGGGTTTTTGTTGACCAAAATGGGAAGCTTCTTCCTGAAGGTAGGATTTGTTGGTCAGAAGCTCCTTTGGAAGTGGTAATTCAGAAGCCGTATGCTATAGCTTTGTTGCCCAGATTTGTGGAGATTCGGTCTCTCCGAGCTCCTTATCCCCTGATACAAACAGTTGTTCTTCGAAATGTTCGCCATCTTTGCCAGAGCAATGATTCCACGATACTTGCTTTGGATAATTCTATTCATGGCCTCTTTCCTGTTCCCCTTGGAGCCCAGATAGTCCAATTAACTGCTTCTGGCAACTTTGAGGAGGCCTTGTCATTGTGCAAGCTTCTTCCACCTGAAGATTCAAGTCTTCGTGCTGCAAAGGAGGGTTCAATTCATATAAGATATGCTCACTATCTTTTTGACAATGGGAGCTATGAAGAGGCTATGGAACATTTTCTGGCATCTCAAATAGAAATAACCTATGTGCTTTCCCTGTATCCATCCATTATCCTTCCAAAGACTACTATTGTTCATGATCCGGAGAAGTTGGACATTTATGGGGATGCTTCATATCTCTCCAGAGCTTCTTCAGGTGTGTCAGATGATATGGAACCCCCATCAACATCTCATATGTCAGAATTTGATGAGAGTGCAGCACTTGAATCCAAAAAAATGAACCATAATATGCTTATGGCTCTCATAAAATATTTACAGAAGAAGAGATTTAGTTTTATTGAGAAGGCCACCGCAGAAGGAACTGAAGAAGTTGTTTTAGATGCAGTTGGGGATAACTTTGCATCTTACAATAGGCTTAAGAAAACAAACAAGGGGCGTGGTAATATACCTGTCAGTTCAGGAGCTCGGGAGATGGCTTCAGTATTGGATACTGCTCTACTCCAAGCTTTGCTTCTAACTGGACAGTCTTCAGTGGCTTTAGAATTACTGAGAGGTGTTAACTACTGTGATTTGAAAATATGTGAGGAAATACTTCGGAAAGGCAATCATCATGTTGCTTTATTAGAACTTTTCAAGCACAACTCATTGCACCGGGATGCTCTTGAACTTCTTCACAAATTGGTGGATGAGTCAAAATCTGGCCAGTCTGAAATTACACAAAGATTCAAACCTGAGGATATTGTGGAGTATCTCAAGCCACTATGTGGGACAGACCCCATACTTGTTCTAGAGTTCTCAATGCTTGTTCTTGAAAGCTGTCCATCTCAAACTATAGACCTCTTTCTGTCTGGAAATATTCCAGCAGATATGGTGAGCTCATATTTGAAGAAGCATTCTCCAAACATGCAAGCTAGGTACTTGGAGCTTATGCTTGCAATGAATGAGAATGCAGTATCTGGCAATTTGCAGAATGAAATGGTGCACATCTATCTTTCTGAAGTACTTGATTGGTATGCTGATTTAAGTGCTCAAGAAAAATGGGATGAGAAAGATCATTCCCCAACAAGGAAAAAATTATTGACTGCCTTAGAGAGTATAGCAGGATACAATCCAGAGGCTTTGCTAAAACGTCTTCCACTAGATGCATTGTATGAAGAGCATGCAATATTGTTGGGGAAAATGAACCAACATGATCTGGCATTATCTTTGTATGTTCATAAGCTTAATGCTCCAGAACTGGCATTGTCTTATTGTGATCGGGTCTATGAGTCTATGCATCAGCCATCTTCAAAAAATTCCAGCAACATATACCTTGTACTTTTGCAAATTTATTTGAATCCTCGAAGGACCACAGCAGGTTTCGAAAAGAGAATTACAAATCTATTATCCCCACAGAGTAAAACCATTCCAAAACTTACTCCTACCCCATCCATAAAAAGTAGAGGCCGAGGGTCAAAGAAAATTGCTGCAATAGAGGGTGCAGAGGACACAAAAGTTAGTTTAAGCAGCACTGACAGTGGCAGGAGTGATGGTGATGCAGATGAGTATAATGATGAGGGTGGTTCTACTATCATGCTTGATGAGGTCCTTGATTTGTTGAGCCGCAGGTGGGATAGAATTAATGGAGCTCAGGCCCTTAAACTTTTACCAAAAGAGACGAAATTACAGGATCTACTTTCGTTTCTTGGACCCCTTCTGAGAAAATCTAGTGAAATGTACCGAAATTGTTCGGTGATAAAGAGTTTGAGACAAAGTGAGAACCTTCAGGTGAAAGACAAACTCTACAGTCAGAGGAAAGCAGTTGTGAAGATAACCGGTGATAGCATGTGTTCTCTGTGCCATAAGAAAATAGGGACAAGTGTTTTTGCAGTCTATCCAAATGGTAGCACACTCGTGCACTTTGTCTGTTTCAGAGATTCTCAAAATATGAAAGCAGTGGGCAAAGGGTCTCAATTGAGGAAGCGACTATGA
Predicted protein sequences of Glyma.01g176000
>Glyma.01g176000.1.p sequence-type=predicted peptide transcript=Glyma.01g176000.1 locus=Glyma.01g176000 id=Glyma.01g176000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHCVLLSKSQAQASLKLCKKIRGCEEMVHSAYDCLELVRECPAKIESIESYGSKLLVGCSDGSLRIFAPETESSSDGSKSYALEKNLAGFAKKPVLSMTVVESRDFLISLSESIAFHRLPFFETIAVITKAKGANLFCWDHRRGFLCFARQKRVCIFRHDGGRGFVEVKDFGVADTVKSMCWCGENICLGIRREYVILNASNGALSEVFTSGRLAPPLVVSLPSGELLLGKENIGVFVDQNGKLLPEGRICWSEAPLEVVIQKPYAIALLPRFVEIRSLRAPYPLIQTVVLRNVRHLCQSNDSTILALDNSIHGLFPVPLGAQIVQLTASGNFEEALSLCKLLPPEDSSLRAAKEGSIHIRYAHYLFDNGSYEEAMEHFLASQIEITYVLSLYPSIILPKTTIVHDPEKLDIYGDASYLSRASSGVSDDMEPPSTSHMSEFDESAALESKKMNHNMLMALIKYLQKKRFSFIEKATAEGTEEVVLDAVGDNFASYNRLKKTNKGRGNIPVSSGAREMASVLDTALLQALLLTGQSSVALELLRGVNYCDLKICEEILRKGNHHVALLELFKHNSLHRDALELLHKLVDESKSGQSEITQRFKPEDIVEYLKPLCGTDPILVLEFSMLVLESCPSQTIDLFLSGNIPADMVSSYLKKHSPNMQARYLELMLAMNENAVSGNLQNEMVHIYLSEVLDWYADLSAQEKWDEKDHSPTRKKLLTALESIAGYNPEALLKRLPLDALYEEHAILLGKMNQHDLALSLYVHKLNAPELALSYCDRVYESMHQPSSKNSSNIYLVLLQIYLNPRRTTAGFEKRITNLLSPQSKTIPKLTPTPSIKSRGRGSKKIAAIEGAEDTKVSLSSTDSGRSDGDADEYNDEGGSTIMLDEVLDLLSRRWDRINGAQALKLLPKETKLQDLLSFLGPLLRKSSEMYRNCSVIKSLRQSENLQVKDKLYSQRKAVVKITGDSMCSLCHKKIGTSVFAVYPNGSTLVHFVCFRDSQNMKAVGKGSQLRKRL*






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